RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 STOML1Q9UBI4 398 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 FAM198AQ9UFP1 575 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 STARD13Q9Y3M8 1113 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 AVILO75366 819 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 F9P00740 461 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 TUBB4BP68371 445 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 BBS9Q3SYG4 887 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 ZBTB41Q5SVQ8 909 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 ZFPM1Q8IX07 1006 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 ARFGAP2Q8N6H7 521 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 STMN2Q93045 179 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 C2orf49Q9BVC5 232 aaPredicted RBP9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 CARD6Q9BX69 1037 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 USP20Q9Y2K6 914 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 NPHP3-ACAD11A0A0J9YXS1 232 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 ZNF839A8K0R7 811 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 SMIM24O75264 130 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 BAIAP3O94812 1187 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 HMOX2P30519 316 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 TKTL1P51854 596 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 SNRPD1P62314 119 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 OCRLQ01968 901 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 CCNG2Q16589 344 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 CCDC62Q6P9F0 684 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 RASSF3Q86WH2 238 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 TMEM86AQ8N2M4 240 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 LY9Q9HBG7 655 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 PSD3Q9NYI0 1048 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 JRKLQ9Y4A0 524 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 KRT87PA6NCN2 255 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 USP27XA6NNY8 438 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 ACSL4O60488 711 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 OR1E1P30953 314 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 BCAT1P54687 386 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 ADKP55263 362 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 RPL6Q02878 288 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 KIF19Q2TAC6 998 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 SPDYAQ5MJ70 313 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 TPRG1Q6ZUI0 275 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 LPCAT2Q7L5N7 544 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 RABEPKQ7Z6M1 372 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 IPMKQ8NFU5 416 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 BLOC1S5Q8TDH9 187 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 FAM105AQ9NUU6 356 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 RPS6KB2Q9UBS0 482 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 ITGA11Q9UKX5 1188 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 KIF1AQ12756 1690 aa9.58□□□□□ -0.88
LIMCH1-202ENST00000381753 POC1B-GALNT4F8VUJ3 575 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 TOM1L1O75674 476 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 BMP10O95393 424 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 TRIM49P0CI25 452 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 TRIM49CP0CI26 452 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CXCL8P10145 99 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 WDR75Q8IWA0 830 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 NCLNQ969V3 563 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 SENP8Q96LD8 212 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 SERPINB11Q96P15 392 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 RHBGQ9H310 441 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 PARVAQ9NVD7 372 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 SNX6Q9UNH7 406 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 ERVW-1Q9UQF0 538 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CDC42BPAQ5VT25 1732 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 LTBP3Q9NS15 1303 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 KCNA2P16389 499 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CMA1P23946 247 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 SERPINA4P29622 427 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 SHMT1P34896 483 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 ROR1Q01973 937 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 OLFML2BQ68BL8 750 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CPLX4Q7Z7G2 160 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 TTC7BQ86TV6 843 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 DENND1CQ8IV53 801 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 PXYLP1Q8TE99 480 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 GSDMAQ96QA5 445 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 MTA3Q9BTC8 594 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 AP3B1O00203 1094 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 KIF3CO14782 793 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 MUTP22033 750 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CCR1P32246 355 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 RBBP8NLQ8NC74 664 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 OR8K1Q8NGG5 319 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 MRIQ9BWK5 157 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CLIC5Q9NZA1 410 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 MARCH2Q9P0N8 246 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 EDARQ9UNE0 448 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 INVSQ9Y283 1065 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 ZKSCAN5Q9Y2L8 839 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 PCDHAC2Q9Y5I4 1007 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 MEIS2O14770 477 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CASQ2O14958 399 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CA3P07451 260 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CYP11B2P19099 503 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 RRM1P23921 792 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 RPL21P46778 160 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 RCAN1P53805 252 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 ZNF280AP59817 542 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 ATP13A4Q4VNC1 1196 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CCDC121Q6ZUS5 278 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 USP45Q70EL2 814 aa9.57□□□□□ -0.88
LIMCH1-202ENST00000381753 CROCCP2Q86T23 111 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms