RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 GJA4P35212 333 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 IFNAR2P48551 515 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 GALK1P51570 392 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 ZXDBP98169 803 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 FOXK2Q01167 660 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 NR1H3Q13133 447 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 ADAM9Q13443 819 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 EDRF1Q3B7T1 1238 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 FBXO43Q4G163 708 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 ZCWPW2Q504Y3 356 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 LONP2Q86WA8 852 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 SMARCD1Q96GM5 515 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 P2RY13Q9BPV8 354 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 HINFPQ9BQA5 517 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 RNF38Q9H0F5 515 aa18.85■□□□□ 0.61
HDDC3-201ENST00000330334 CCDC163A0A0D9SF12 145 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 FAM92AA1XBS5 289 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 CHURC1-FNTBB4DL54 471 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 TNFRSF10BO14763 440 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 HLA-DRAP01903 254 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 KRT13P13646 458 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 GTF2H1P32780 548 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 RAP1GAPP47736 663 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 NUCB2P80303 420 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 FAM35AQ86V20 835 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 FAM186BQ8IYM0 893 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 FUKQ8N0W3 1084 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 FMR1NBQ8N0W7 255 aaPredicted RBP18.84■□□□□ 0.61
HDDC3-201ENST00000330334 DCLK2Q8N568 766 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 FAXDC2Q96IV6 333 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 KCNK16Q96T55 309 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 CYP3A43Q9HB55 503 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 GDPD2Q9HCC8 539 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 CSNK1G1Q9HCP0 422 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 DMAP1Q9NPF5 467 aaPredicted RBP18.84■□□□□ 0.61
HDDC3-201ENST00000330334 NCDNQ9UBB6 729 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 MAPK8IP1Q9UQF2 711 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 WNT6Q9Y6F9 365 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 ZNF638Q14966 1978 aaKnown RBP18.84■□□□□ 0.61
HDDC3-201ENST00000330334 ANAPC1Q9H1A4 1944 aa18.84■□□□□ 0.61
HDDC3-201ENST00000330334 LEFTY2O00292 366 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 SLC9A3R1O14745 358 aaPredicted RBP18.83■□□□□ 0.6
HDDC3-201ENST00000330334 NFATC1O95644 943 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 TRIM21P19474 475 aaKnown RBP18.83■□□□□ 0.6
HDDC3-201ENST00000330334 ASPAP45381 313 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 ID4P47928 161 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 TUBP50607 506 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 NDST1P52848 882 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 INCA1Q0VD86 236 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 COBLL1Q53SF7 1204 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 ACOT1Q86TX2 421 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 DDX42Q86XP3 938 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDDC3-201ENST00000330334 KIAA2013Q8IYS2 634 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 CCDC26Q8TAB7 109 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 IMPG2Q9BZV3 1241 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 LINC00597Q9H2U6 94 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 FBRSL1Q9HCM7 1045 aaKnown RBP18.83■□□□□ 0.6
HDDC3-201ENST00000330334 RMND1Q9NWS8 449 aa18.83■□□□□ 0.6
HDDC3-201ENST00000330334 ZDHHC11BP0C7U3 371 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 PIK3CAP42336 1068 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 PPP3CAQ08209 521 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 LAIR1Q6GTX8 287 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 SCARA5Q6ZMJ2 495 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 ERMP1Q7Z2K6 904 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 WDR5BQ86VZ2 330 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 ADGRG2Q8IZP9 1017 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 CD101Q93033 1021 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 FBXO32Q969P5 355 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 GSDMAQ96QA5 445 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 DUSP9Q99956 384 aaKnown RBP18.82■□□□□ 0.6
HDDC3-201ENST00000330334 MED10Q9BTT4 135 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 GTPBP4Q9BZE4 634 aaKnown RBP18.82■□□□□ 0.6
HDDC3-201ENST00000330334 TMEM8AQ9HCN3 771 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 C2orf42Q9NWW7 574 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 RAB23Q9ULC3 237 aa18.82■□□□□ 0.6
HDDC3-201ENST00000330334 CEP250Q9BV73 2442 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 GOLGA6L4A6NEF3 574 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 HRO43593 1189 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 AP1G2O75843 785 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 CLSTN1O94985 981 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 EGFP01133 1207 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 GCLMP48507 274 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 FNTBP49356 437 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 SLC5A3P53794 718 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 SPOPLQ6IQ16 392 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 CAMKK1Q8N5S9 505 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 ENGASEQ8NFI3 743 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 SCAMP5Q8TAC9 235 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 SPATA20Q8TB22 786 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 TAS1R2Q8TE23 839 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 ELMO3Q96BJ8 720 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 HNRNPABQ99729 332 aaKnown RBP18.81■□□□□ 0.6
HDDC3-201ENST00000330334 FBXO44Q9H4M3 255 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 FAM124BQ9H5Z6 455 aaPredicted RBP18.81■□□□□ 0.6
HDDC3-201ENST00000330334 APOBEC3GQ9HC16 384 aaKnown RBP18.81■□□□□ 0.6
HDDC3-201ENST00000330334 CPQQ9Y646 472 aa18.81■□□□□ 0.6
HDDC3-201ENST00000330334 CACNA1AO00555 2505 aa18.8■□□□□ 0.6
HDDC3-201ENST00000330334 LRP3O75074 770 aa18.8■□□□□ 0.6
HDDC3-201ENST00000330334 ABL1P00519 1130 aa18.8■□□□□ 0.6
HDDC3-201ENST00000330334 TGM1P22735 817 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms