RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TICRRQ7Z2Z1 1910 aa29.28■■■□□ 2.28
ATPAF1-201ENST00000329231 GNA14O95837 355 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 FAM200BP0CF97 657 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 ADORA2BP29275 332 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 SLC5A3P53794 718 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 TATDN2Q93075 761 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 FBXO32Q969P5 355 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 CLDN23Q96B33 292 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 SMOQ99835 787 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 FAM83CQ9BQN1 747 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 CISHQ9NSE2 258 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 COL4A2P08572 1712 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 CACNA1HO95180 2353 aa29.27■■■□□ 2.28
ATPAF1-201ENST00000329231 TNFRSF10BO14763 440 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 FGFR1OPO95684 399 aaKnown RBP29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 ABL1P00519 1130 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 RPS9P46781 194 aaKnown RBP29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 FMO5P49326 533 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 ITPRIPL2Q3MIP1 535 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 RALGPS2Q86X27 583 aaPredicted RBP29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 C1orf210Q8IVY1 113 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 FAM86C1Q9NVL1 165 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 IL37Q9NZH6 218 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 ARHGAP26Q9UNA1 814 aa29.26■■■□□ 2.27
ATPAF1-201ENST00000329231 F5P12259 2224 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 PMM2O15305 246 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 MAP3K7CLP57077 242 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 TNK2Q07912 1038 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 CETN1Q12798 172 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 MTF1Q14872 753 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 ZNF394Q53GI3 561 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 ZMIZ2Q8NF64 920 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 SCAMP5Q8TAC9 235 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 TTC8Q8TAM2 541 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 HEXIM2Q96MH2 286 aaKnown RBP29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 CLSTN2Q9H4D0 955 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 MIA3Q5JRA6 1907 aa29.25■■■□□ 2.27
ATPAF1-201ENST00000329231 ZNF638Q14966 1978 aaKnown RBP29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 SPECC1L-ADORA2AF8WAN1 911 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 BEST1O76090 585 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 TCF3P15923 654 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 CTHP32929 405 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 SOX9P48436 509 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 USP4Q13107 963 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 PDGFRLQ15198 375 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 ZNF77Q15935 545 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 ZNF687Q8N1G0 1237 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 RIN3Q8TB24 985 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 SH3RF2Q8TEC5 729 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 ARID3AQ99856 593 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 SRRTQ9BXP5 876 aaKnown RBP29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 FBXO44Q9H4M3 255 aa29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 SPATA6Q9NWH7 488 aaPredicted RBP29.24■■■□□ 2.27
ATPAF1-201ENST00000329231 YWHAEP62258 255 aaKnown RBP29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 FZD5Q13467 585 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 CUL2Q13617 745 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 RUNX3Q13761 415 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 CLEC20AQ6ZU45 233 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 TTC16Q8NEE8 873 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 TMEM176AQ96HP8 235 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 EBF3Q9H4W6 596 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 LMBRD1Q9NUN5 540 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 RWDD2AQ9UIY3 292 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 ANAPC1Q9H1A4 1944 aa29.23■■■□□ 2.27
ATPAF1-201ENST00000329231 FAM92AA1XBS5 289 aa29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 P4HA2O15460 535 aa29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 OAS1P00973 400 aaKnown RBP29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 MARSP56192 900 aaKnown RBP29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 SLC7A9P82251 487 aa29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 TRIM68Q6AZZ1 485 aa29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 OSCP1Q8WVF1 389 aa29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 PHOX2BQ99453 314 aa29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 HPS4Q9NQG7 708 aa29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 CHORDC1Q9UHD1 332 aaPredicted RBP29.22■■■□□ 2.27
ATPAF1-201ENST00000329231 OLFM2O95897 454 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 CCDC192P0DO97 292 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 TBXAS1P24557 533 aaPredicted RBP29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 HOXD11P31277 338 aaPredicted RBP29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 RAD23BP54727 409 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 PPP1R26Q5T8A7 1209 aaPredicted RBP29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 SNX30Q5VWJ9 437 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 TRIM59Q8IWR1 403 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 MLKLQ8NB16 471 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 SLC4A11Q8NBS3 891 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 RNF38Q9H0F5 515 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 LMAN1LQ9HAT1 526 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 PNPLA8Q9NP80 782 aa29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 DUS2Q9NX74 493 aaKnown RBP29.21■■■□□ 2.27
ATPAF1-201ENST00000329231 LAMTOR5O43504 91 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 IFNAR2P48551 515 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 AMPD2Q01433 879 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 LRMPQ12912 555 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 HECTD3Q5T447 861 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 NT5C1BQ96P26 610 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 IER2Q9BTL4 223 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 DUSP16Q9BY84 665 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 GMIPQ9P107 970 aa29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.2■■■□□ 2.26
ATPAF1-201ENST00000329231 KIF26AQ9ULI4 1882 aaPredicted RBP29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 GOLGA6L22H0YM25 854 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms