RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 ADSSL1Q8N142 457 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 ARL14EPQ8N8R7 260 aaPredicted RBP22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 NELL1Q92832 810 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 EXOC4Q96A65 974 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 SLC22A12Q96S37 553 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 HPS4Q9NQG7 708 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 PSMA7O14818 248 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 YWHAQP27348 245 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 SLC7A9P82251 487 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 TAF10Q12962 218 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 RIN3Q8TB24 985 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 OSCP1Q8WVF1 389 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 ATP2A3Q93084 1043 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 CYP2S1Q96SQ9 504 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 NT5C1AQ9BXI3 368 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 EBF3Q9H4W6 596 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 APOBEC3GQ9HC16 384 aaKnown RBP22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 CSNK1G1Q9HCP0 422 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 KRT82Q9NSB4 513 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 IL37Q9NZH6 218 aa22.61■■□□□ 1.21
UBE2D3-201ENST00000321805 PTPRZ1P23471 2315 aaPredicted RBP22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 FAM92AA1XBS5 289 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 OAS1P00973 400 aaKnown RBP22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 LMNAP02545 664 aaKnown RBP22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 CSTF1Q05048 431 aaKnown RBP22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 CCINQ13939 588 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 FOXR2Q6PJQ5 311 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 SPEM1Q8N4L4 309 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 CPA6Q8N4T0 437 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 FBXL13Q8NEE6 735 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 SH3RF2Q8TEC5 729 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 ELMO3Q96BJ8 720 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 DHTKD1Q96HY7 919 aaPredicted RBP22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 MMRN2Q9H8L6 949 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 ZSCAN32Q9NX65 697 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 DUS2Q9NX74 493 aaKnown RBP22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 HMGXB4Q9UGU5 601 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 R4GN57 208 aa22.6■■□□□ 1.21
UBE2D3-201ENST00000321805 TNFRSF10BO14763 440 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 AP1G2O75843 785 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 PAPSS2O95340 614 aaPredicted RBP22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 IFNAR2P48551 515 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 SLC5A3P53794 718 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 PON2Q15165 354 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 SNX30Q5VWJ9 437 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 ANKRD40Q6AI12 368 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 TRIM68Q6AZZ1 485 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 DDX42Q86XP3 938 aaKnown RBP eCLIP22.59■■□□□ 1.214e-7■■■□□ 18.4
UBE2D3-201ENST00000321805 ZBTB44Q8NCP5 570 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 TTC8Q8TAM2 541 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 SLC2A14Q8TDB8 520 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 FBXO32Q969P5 355 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 KCNK16Q96T55 309 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 HNRNPABQ99729 332 aaKnown RBP22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 RAB20Q9NX57 234 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 MYH10P35580 1976 aa22.59■■□□□ 1.21
UBE2D3-201ENST00000321805 TRDMT1O14717 391 aaKnown RBP22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 CILPO75339 1184 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 CCDC130P13994 396 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 TUBP50607 506 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 NRLP54845 237 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 ERCC4Q92889 916 aaPredicted RBP22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 EEF2KMTQ96G04 330 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 FBXO44Q9H4M3 255 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 ECT2Q9H8V3 914 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 METTL14Q9HCE5 456 aaKnown RBP22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 PNPLA8Q9NP80 782 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 COQ4Q9Y3A0 265 aa22.58■■□□□ 1.21
UBE2D3-201ENST00000321805 FAM200BP0CF97 657 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 ARSAP15289 507 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 CXCL12P48061 93 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 PMS1P54277 932 aaKnown RBP22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 GRSF1Q12849 480 aaKnown RBP eCLIP22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 NR1H3Q13133 447 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 EML3Q32P44 896 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 TMEM196Q5HYL7 178 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 WDR44Q5JSH3 913 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 ZMIZ2Q8NF64 920 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 ATRIPQ8WXE1 791 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 CEP63Q96MT8 703 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 SMOQ99835 787 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 ARMCX3Q9UH62 379 aaPredicted RBP22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 MAN1B1Q9UKM7 699 aa22.57■■□□□ 1.2
UBE2D3-201ENST00000321805 OTOL1A6NHN0 477 aaPredicted RBP22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 LEFTY2O00292 366 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 LILRB5O75023 590 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 NFATC1O95644 943 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 ZDHHC11BP0C7U3 371 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 TDGF1P13385 188 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 IFRD2Q12894 506 aaPredicted RBP22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 GAS6Q14393 721 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 DCAF17Q5H9S7 520 aaPredicted RBP22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 TCERG1LQ5VWI1 586 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 C12orf29Q8N999 325 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 SEMA4DQ92854 862 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 TWNKQ96RR1 684 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 FAM49BQ9NUQ9 324 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 WNT6Q9Y6F9 365 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 GVINP1Q7Z2Y8 2422 aa22.56■■□□□ 1.2
UBE2D3-201ENST00000321805 TRIM49BA6NDI0 452 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms