RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C TVP18Q04767 167 aa2.98□□□□□ -1.93
CCS1YMR038C YDR029WQ12111 104 aa2.98□□□□□ -1.93
CCS1YMR038C SMT3Q12306 101 aaKnown RBP2.98□□□□□ -1.93
CCS1YMR038C RPL27AP0C2H6 136 aaKnown RBP2.97□□□□□ -1.93
CCS1YMR038C HYP2P23301 157 aaKnown RBP2.97□□□□□ -1.93
CCS1YMR038C MRP49P32388 137 aa2.97□□□□□ -1.93
CCS1YMR038C ZRT1P32804 376 aa2.97□□□□□ -1.93
CCS1YMR038C PEX22P39718 180 aa2.97□□□□□ -1.93
CCS1YMR038C ERG28P40030 148 aa2.97□□□□□ -1.93
CCS1YMR038C DCV1P43595 202 aa2.97□□□□□ -1.93
CCS1YMR038C SNN1P48232 102 aa2.97□□□□□ -1.93
CCS1YMR038C SNA2P56508 79 aa2.97□□□□□ -1.93
CCS1YMR038C ARC18Q05933 178 aaKnown RBP2.97□□□□□ -1.93
CCS1YMR038C GTO3Q04806 366 aa2.96□□□□□ -1.94
CCS1YMR038C YLR194CQ05777 254 aa2.96□□□□□ -1.94
CCS1YMR038C DCN1Q12395 269 aa2.96□□□□□ -1.94
CCS1YMR038C FMP49A0A023PZB3 126 aa2.95□□□□□ -1.94
CCS1YMR038C YKR032WP36127 104 aa2.95□□□□□ -1.94
CCS1YMR038C PAM17P36147 197 aa2.95□□□□□ -1.94
CCS1YMR038C YER085CP40058 173 aa2.95□□□□□ -1.94
CCS1YMR038C PHS1P40857 217 aa2.95□□□□□ -1.94
CCS1YMR038C CIN5P40917 295 aa2.94□□□□□ -1.94
CCS1YMR038C VMA9Q3E7B6 73 aa2.94□□□□□ -1.94
CCS1YMR038C AIM29P36154 155 aa2.93□□□□□ -1.94
CCS1YMR038C RPC10P40422 70 aa2.93□□□□□ -1.94
CCS1YMR038C SDS23P53172 527 aa2.93□□□□□ -1.94
CCS1YMR038C YBL112CQ3E7Y4 105 aa2.93□□□□□ -1.94
CCS1YMR038C YGL010WP25338 174 aa2.92□□□□□ -1.94
CCS1YMR038C YBR219CP38317 127 aa2.92□□□□□ -1.94
CCS1YMR038C PET8P38921 284 aa2.92□□□□□ -1.94
CCS1YMR038C PAU7P39545 55 aa2.92□□□□□ -1.94
CCS1YMR038C SEC72P39742 193 aaKnown RBP2.92□□□□□ -1.94
CCS1YMR038C PAU5P43575 122 aa2.92□□□□□ -1.94
CCS1YMR038C OST3P48439 350 aa2.92□□□□□ -1.94
CCS1YMR038C ATP14Q12349 124 aa2.92□□□□□ -1.94
CCS1YMR038C FMP16Q12497 93 aa2.92□□□□□ -1.94
CCS1YMR038C YNR034W-AQ3E841 98 aa2.92□□□□□ -1.94
CCS1YMR038C HMRA1P0CY11 126 aa2.91□□□□□ -1.94
CCS1YMR038C YER076CP40049 302 aa2.91□□□□□ -1.94
CCS1YMR038C AIM19P40502 157 aa2.91□□□□□ -1.94
CCS1YMR038C NTF2P33331 125 aaKnown RBP2.9□□□□□ -1.95
CCS1YMR038C YKR070WP36151 352 aaKnown RBP2.9□□□□□ -1.95
CCS1YMR038C VMA7P39111 118 aa2.9□□□□□ -1.95
CCS1YMR038C YEL008WP40001 126 aa2.9□□□□□ -1.95
CCS1YMR038C YJR146WP47174 117 aa2.9□□□□□ -1.95
CCS1YMR038C YGL149WP53116 101 aa2.9□□□□□ -1.95
CCS1YMR038C CMC2Q3E7A4 109 aa2.9□□□□□ -1.95
CCS1YMR038C ENV10Q99382 181 aa2.9□□□□□ -1.95
CCS1YMR038C YKL070WP36087 169 aa2.89□□□□□ -1.95
CCS1YMR038C UBC12P52491 188 aa2.89□□□□□ -1.95
CCS1YMR038C POM33Q12164 279 aa2.89□□□□□ -1.95
CCS1YMR038C YLR118CQ12354 227 aa2.89□□□□□ -1.95
CCS1YMR038C CMC4Q3E7A9 73 aa2.89□□□□□ -1.95
CCS1YMR038C PRE1P22141 198 aaKnown RBP2.88□□□□□ -1.95
CCS1YMR038C FSF1Q12029 327 aaKnown RBP2.88□□□□□ -1.95
CCS1YMR038C YAL067W-AQ8TGK6 75 aa2.88□□□□□ -1.95
CCS1YMR038C VTC1P40046 129 aaRIP-Chip data2.87□□□□□ -1.95not detected
CCS1YMR038C APS2Q00381 147 aa2.87□□□□□ -1.95
CCS1YMR038C YMR295CQ03559 197 aa2.87□□□□□ -1.95
CCS1YMR038C WIP1Q2V2P8 89 aa2.87□□□□□ -1.95
CCS1YMR038C KTI11Q3E840 82 aa2.87□□□□□ -1.95
CCS1YMR038C YPR014CQ6B0W2 109 aa2.87□□□□□ -1.95
CCS1YMR038C ECM12O13529 151 aa2.86□□□□□ -1.95
CCS1YMR038C PFY1P07274 126 aa2.86□□□□□ -1.95
CCS1YMR038C SEC4P07560 215 aaKnown RBP2.86□□□□□ -1.95
CCS1YMR038C POP7P38291 140 aa2.86□□□□□ -1.95
CCS1YMR038C HSP10P38910 106 aa2.86□□□□□ -1.95
CCS1YMR038C DAN1P47178 298 aa2.86□□□□□ -1.95
CCS1YMR038C CGR1P53188 120 aa2.86□□□□□ -1.95
CCS1YMR038C YMR175W-AQ3E766 64 aa2.86□□□□□ -1.95
CCS1YMR038C YAL065CO13511 128 aa2.85□□□□□ -1.95
CCS1YMR038C NHP6AP11632 93 aaKnown RBP2.85□□□□□ -1.95
CCS1YMR038C SRB6P32570 121 aa2.85□□□□□ -1.95
CCS1YMR038C CWP2P43497 92 aa2.85□□□□□ -1.95
CCS1YMR038C YIL014C-AQ02598 104 aa2.85□□□□□ -1.95
CCS1YMR038C MGR2Q02889 113 aa2.85□□□□□ -1.95
CCS1YMR038C YOR008C-AQ3E7B9 74 aa2.85□□□□□ -1.95
CCS1YMR038C POR1P04840 283 aaKnown RBP2.84□□□□□ -1.95
CCS1YMR038C ARL3Q02804 198 aa2.84□□□□□ -1.95
CCS1YMR038C ADH3P07246 375 aaKnown RBP2.83□□□□□ -1.96
CCS1YMR038C PAU19P0CE85 124 aa2.83□□□□□ -1.96
CCS1YMR038C PAU21P0CE86 164 aa2.83□□□□□ -1.96
CCS1YMR038C PAU22P0CE87 164 aa2.83□□□□□ -1.96
CCS1YMR038C CNB1P25296 175 aa2.83□□□□□ -1.96
CCS1YMR038C PAU3P25610 124 aa2.83□□□□□ -1.96
CCS1YMR038C APS1P35181 156 aa2.83□□□□□ -1.96
CCS1YMR038C PAU15P40585 124 aa2.83□□□□□ -1.96
CCS1YMR038C LSM8P47093 109 aaKnown RBP2.83□□□□□ -1.96
CCS1YMR038C PKR1Q03880 122 aaKnown RBP2.83□□□□□ -1.96
CCS1YMR038C YAR029WP39549 74 aa2.82□□□□□ -1.96
CCS1YMR038C VMA21P41806 77 aa2.82□□□□□ -1.96
CCS1YMR038C TOS6P48560 102 aa2.82□□□□□ -1.96
CCS1YMR038C YGL041C-BQ3E750 60 aa2.82□□□□□ -1.96
CCS1YMR038C AQY2P0CD90 149 aa2.81□□□□□ -1.96
CCS1YMR038C HMRA2P0CY13 119 aa2.81□□□□□ -1.96
CCS1YMR038C COX10P21592 462 aa2.81□□□□□ -1.96
CCS1YMR038C GTT1P40582 234 aa2.81□□□□□ -1.96
CCS1YMR038C RUB1Q03919 77 aa2.81□□□□□ -1.96
CCS1YMR038C RPL31AP0C2H8 113 aaKnown RBP2.8□□□□□ -1.96
CCS1YMR038C YLR156WP0CE96 114 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms