RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W ATX1P38636 73 aa3.08□□□□□ -1.92
VPS36YLR417W FPR1P20081 114 aaKnown RBP3.07□□□□□ -1.92
VPS36YLR417W HSP12P22943 109 aaKnown RBP3.07□□□□□ -1.92
VPS36YLR417W YHR173CP38864 112 aa3.07□□□□□ -1.92
VPS36YLR417W YNL198CP40166 100 aa3.07□□□□□ -1.92
VPS36YLR417W YDR391CQ04170 232 aa3.07□□□□□ -1.92
VPS36YLR417W YDR524C-BQ3E6R4 66 aa3.07□□□□□ -1.92
VPS36YLR417W YCR075W-AQ3E830 75 aa3.07□□□□□ -1.92
VPS36YLR417W INO4P13902 151 aa3.07□□□□□ -1.92
VPS36YLR417W YHR022CP38763 256 aa3.07□□□□□ -1.92
VPS36YLR417W PAU7P39545 55 aa3.07□□□□□ -1.92
VPS36YLR417W YNL217WP40152 326 aa3.07□□□□□ -1.92
VPS36YLR417W POP3P53833 195 aaPredicted RBP3.07□□□□□ -1.92
VPS36YLR417W DYN2Q02647 92 aa3.07□□□□□ -1.92
VPS36YLR417W YMR007WQ03675 126 aa3.07□□□□□ -1.92
VPS36YLR417W SDH7Q04401 133 aa3.07□□□□□ -1.92
VPS36YLR417W PRM3Q08931 133 aa3.07□□□□□ -1.92
VPS36YLR417W YDL180WQ12301 547 aa3.07□□□□□ -1.92
VPS36YLR417W YGL258W-AQ3E740 77 aa3.07□□□□□ -1.92
VPS36YLR417W PAM17P36147 197 aa3.06□□□□□ -1.92
VPS36YLR417W BRP1P53194 125 aa3.06□□□□□ -1.92
VPS36YLR417W YNR077CP53758 84 aa3.06□□□□□ -1.92
VPS36YLR417W YOL014WQ08110 124 aa3.06□□□□□ -1.92
VPS36YLR417W NHP2P32495 156 aaPredicted RBP3.05□□□□□ -1.92
VPS36YLR417W SRX1P36077 127 aa3.05□□□□□ -1.92
VPS36YLR417W MRPL24P36525 258 aaPredicted RBP3.05□□□□□ -1.92
VPS36YLR417W CUP9P41817 306 aa3.05□□□□□ -1.92
VPS36YLR417W YJL027CP47063 138 aaPredicted RBP3.05□□□□□ -1.92
VPS36YLR417W SCS22Q6Q595 175 aa3.05□□□□□ -1.92
VPS36YLR417W YML100W-AQ8TGT0 57 aa3.05□□□□□ -1.92
VPS36YLR417W YCR023CP25351 611 aa3.05□□□□□ -1.92
VPS36YLR417W YHR130CP38834 111 aa3.05□□□□□ -1.92
VPS36YLR417W YER181CP40097 107 aa3.05□□□□□ -1.92
VPS36YLR417W YIL163CP40448 117 aa3.05□□□□□ -1.92
VPS36YLR417W UPS1Q05776 175 aa3.05□□□□□ -1.92
VPS36YLR417W FIT3Q08907 204 aa3.05□□□□□ -1.92
VPS36YLR417W YAR023CD6VPM8 179 aa3.04□□□□□ -1.92
VPS36YLR417W YSF3P0C074 85 aaPredicted RBP3.04□□□□□ -1.92
VPS36YLR417W YPL073CP40323 161 aa3.04□□□□□ -1.92
VPS36YLR417W BOL1Q3E793 110 aa3.04□□□□□ -1.92
VPS36YLR417W NRG2P38082 220 aa3.03□□□□□ -1.92
VPS36YLR417W YFL065CP43539 102 aa3.03□□□□□ -1.92
VPS36YLR417W HSK3P69852 69 aa3.03□□□□□ -1.92
VPS36YLR417W YDR042CQ03205 200 aa3.03□□□□□ -1.92
VPS36YLR417W HPA2Q06592 156 aa3.03□□□□□ -1.92
VPS36YLR417W YPR203WQ08994 102 aa3.03□□□□□ -1.92
VPS36YLR417W VAR1P02381 398 aa3.02□□□□□ -1.93
VPS36YLR417W MRPL31P14063 131 aaPredicted RBP3.02□□□□□ -1.93
VPS36YLR417W ROX3P25046 220 aa3.02□□□□□ -1.93
VPS36YLR417W YCR085WP25650 117 aa3.02□□□□□ -1.93
VPS36YLR417W YBR209WP38311 105 aa3.02□□□□□ -1.93
VPS36YLR417W YNL200CP40165 246 aaKnown RBP3.02□□□□□ -1.93
VPS36YLR417W YFR054CP43622 192 aa3.02□□□□□ -1.93
VPS36YLR417W RAF1Q06891 181 aa3.02□□□□□ -1.93
VPS36YLR417W YOS1Q3E834 85 aa3.02□□□□□ -1.93
VPS36YLR417W DSE2P38844 325 aa3.02□□□□□ -1.93
VPS36YLR417W POC4Q12245 148 aaPredicted RBP3.02□□□□□ -1.93
VPS36YLR417W FZF1P32805 299 aa3.01□□□□□ -1.93
VPS36YLR417W VTC1P40046 129 aaRIP-Chip data3.01□□□□□ -1.93not detected
VPS36YLR417W MPC3P53311 146 aa3.01□□□□□ -1.93
VPS36YLR417W YDR102CQ03864 110 aa3.01□□□□□ -1.93
VPS36YLR417W YLR412C-AQ3E742 68 aa3.01□□□□□ -1.93
VPS36YLR417W CSH1P38287 376 aa3□□□□□ -1.93
VPS36YLR417W YFL019CP43576 117 aa3□□□□□ -1.93
VPS36YLR417W FIT2Q08906 153 aa3□□□□□ -1.93
VPS36YLR417W YLR361C-AQ3E795 98 aa3□□□□□ -1.93
VPS36YLR417W HSP150P32478 413 aa2.99□□□□□ -1.93
VPS36YLR417W RPS27AP35997 82 aaKnown RBP2.99□□□□□ -1.93
VPS36YLR417W RPS27BP38711 82 aa2.99□□□□□ -1.93
VPS36YLR417W SNF11P38956 169 aa2.99□□□□□ -1.93
VPS36YLR417W COX12Q01519 83 aa2.99□□□□□ -1.93
VPS36YLR417W DAD1Q12248 94 aa2.99□□□□□ -1.93
VPS36YLR417W YOR192C-CQ3E736 78 aa2.99□□□□□ -1.93
VPS36YLR417W YLR236CA0A023PZG4 107 aa2.99□□□□□ -1.93
VPS36YLR417W YHR214C-DP0CX93 97 aa2.99□□□□□ -1.93
VPS36YLR417W RPA12P32529 125 aaKnown RBP2.99□□□□□ -1.93
VPS36YLR417W YMR103CQ04436 120 aa2.99□□□□□ -1.93
VPS36YLR417W LSM6Q06406 86 aaKnown RBP2.99□□□□□ -1.93
VPS36YLR417W YFL041W-AQ3E817 63 aa2.99□□□□□ -1.93
VPS36YLR417W UGX2P32772 223 aa2.98□□□□□ -1.93
VPS36YLR417W SFT2P38166 215 aa2.98□□□□□ -1.93
VPS36YLR417W YBR090CP38253 122 aa2.98□□□□□ -1.93
VPS36YLR417W YIL014C-AQ02598 104 aa2.98□□□□□ -1.93
VPS36YLR417W YMR295CQ03559 197 aa2.98□□□□□ -1.93
VPS36YLR417W RAV2Q03956 351 aa2.98□□□□□ -1.93
VPS36YLR417W YOL118CQ08259 102 aa2.98□□□□□ -1.93
VPS36YLR417W FCY1Q12178 158 aa2.98□□□□□ -1.93
VPS36YLR417W YOR032W-AQ8TGS1 66 aa2.98□□□□□ -1.93
VPS36YLR417W YBL071CP38185 102 aa2.97□□□□□ -1.93
VPS36YLR417W DAD4P69851 72 aa2.97□□□□□ -1.93
VPS36YLR417W YOR097CQ12274 175 aaPredicted RBP2.97□□□□□ -1.93
VPS36YLR417W YHR086W-AQ3E746 53 aa2.97□□□□□ -1.93
VPS36YLR417W PFY1P07274 126 aa2.96□□□□□ -1.93
VPS36YLR417W YHR140WP38842 239 aa2.96□□□□□ -1.93
VPS36YLR417W LST8P41318 303 aa2.96□□□□□ -1.93
VPS36YLR417W MGR2Q02889 113 aa2.96□□□□□ -1.93
VPS36YLR417W TOS6P48560 102 aa2.96□□□□□ -1.94
VPS36YLR417W TOM7P53507 60 aa2.96□□□□□ -1.94
VPS36YLR417W GPI19Q04082 140 aa2.96□□□□□ -1.94
VPS36YLR417W YPL261CQ08976 102 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 87.7 ms