RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeast

Gene VTA1, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTA1	YLR181C	UBC7	Q02159	165 aa		2.73	□□□□□ -1.97
VTA1	YLR181C	ARL3	Q02804	198 aa		2.73	□□□□□ -1.97
VTA1	YLR181C	GIM5	Q04493	163 aa		2.73	□□□□□ -1.97
VTA1	YLR181C	HOR7	Q05827	59 aa		2.73	□□□□□ -1.97
VTA1	YLR181C	DAD1	Q12248	94 aa		2.73	□□□□□ -1.97
VTA1	YLR181C	CMC2	Q3E7A4	109 aa		2.73	□□□□□ -1.97
VTA1	YLR181C	POR1	P04840	283 aa	Known RBP	2.72	□□□□□ -1.97
VTA1	YLR181C	DDI2	P0CH63	225 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	DDI3	P0CH64	225 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	YCL042W	P25572	119 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	MRPL28	P36527	147 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	AME1	P38313	324 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	LSM4	P40070	187 aa	Known RBP	2.72	□□□□□ -1.97
VTA1	YLR181C	YMR141C	P40211	102 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	CGR1	P53188	120 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	DAD4	P69851	72 aa		2.72	□□□□□ -1.97
VTA1	YLR181C	RPS22B	Q3E7Y3	130 aa	Known RBP	2.72	□□□□□ -1.97
VTA1	YLR181C	CCW14	O13547	238 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	MRPL31	P14063	131 aa	Predicted RBP	2.71	□□□□□ -1.98
VTA1	YLR181C	FZF1	P32805	299 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	DSE2	P38844	325 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	SNF11	P38956	169 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	PAU7	P39545	55 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	LSM8	P47093	109 aa	Known RBP	2.71	□□□□□ -1.98
VTA1	YLR181C	TDA4	P47153	279 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	CUE4	Q04201	117 aa	Predicted RBP	2.71	□□□□□ -1.98
VTA1	YLR181C	SEN15	Q04675	128 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	YLR342W-A	Q3E810	57 aa		2.71	□□□□□ -1.98
VTA1	YLR181C	SEC4	P07560	215 aa	Known RBP	2.7	□□□□□ -1.98
VTA1	YLR181C	MRPL11	P36521	249 aa	Predicted RBP	2.7	□□□□□ -1.98
VTA1	YLR181C	VTC1	P40046	129 aa	RIP-Chip data	2.7	□□□□□ -1.98	not detected
VTA1	YLR181C	AGE2	P40529	298 aa		2.7	□□□□□ -1.98
VTA1	YLR181C	YGR017W	P53210	297 aa		2.7	□□□□□ -1.98
VTA1	YLR181C	YPR013C	Q12145	317 aa		2.7	□□□□□ -1.98
VTA1	YLR181C	YIL134C-A	Q45U18	67 aa		2.7	□□□□□ -1.98
VTA1	YLR181C	SVP26	P38869	228 aa		2.69	□□□□□ -1.98
VTA1	YLR181C	SEC72	P39742	193 aa	Known RBP	2.69	□□□□□ -1.98
VTA1	YLR181C	THG1	P53215	237 aa	Known RBP	2.69	□□□□□ -1.98
VTA1	YLR181C	YOL160W	Q08321	113 aa		2.69	□□□□□ -1.98
VTA1	YLR181C	COA6	Q3E846	104 aa		2.69	□□□□□ -1.98
VTA1	YLR181C	YER134C	P40081	178 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	FIP1	P45976	327 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	YGR025W	P53216	100 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	YIP3	P53633	176 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	UPS3	Q04006	179 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	PRM3	Q08931	133 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	YPL162C	Q12042	273 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	WIP1	Q2V2P8	89 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	TSC3	Q3E790	80 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	YOR011W-A	Q3E807	68 aa		2.68	□□□□□ -1.98
VTA1	YLR181C	GSP1	P32835	219 aa	Known RBP	2.67	□□□□□ -1.98
VTA1	YLR181C	GSP2	P32836	220 aa	Known RBP	2.67	□□□□□ -1.98
VTA1	YLR181C	SPI1	P40092	148 aa		2.67	□□□□□ -1.98
VTA1	YLR181C	GPI19	Q04082	140 aa		2.67	□□□□□ -1.98
VTA1	YLR181C	FSF1	Q12029	327 aa	Known RBP	2.67	□□□□□ -1.98
VTA1	YLR181C	YOR097C	Q12274	175 aa	Predicted RBP	2.67	□□□□□ -1.98
VTA1	YLR181C	TAR1	Q8TGM6	124 aa		2.67	□□□□□ -1.98
VTA1	YLR181C	PRP8	P33334	2413 aa	Known RBP	2.67	□□□□□ -1.98
VTA1	YLR181C	RPL27A	P0C2H6	136 aa	Known RBP	2.66	□□□□□ -1.98
VTA1	YLR181C	RPL27B	P0C2H7	136 aa	Known RBP	2.66	□□□□□ -1.98
VTA1	YLR181C	PAU16	P35994	123 aa		2.66	□□□□□ -1.98
VTA1	YLR181C	YHR140W	P38842	239 aa		2.66	□□□□□ -1.98
VTA1	YLR181C	YNL146C-A	Q3E7Z1	64 aa		2.66	□□□□□ -1.98
VTA1	YLR181C	YNL200C	P40165	246 aa	Known RBP	2.65	□□□□□ -1.99
VTA1	YLR181C	ERV14	P53173	138 aa		2.65	□□□□□ -1.99
VTA1	YLR181C	CNL1	Q06333	122 aa		2.65	□□□□□ -1.99
VTA1	YLR181C	CCW12	Q12127	133 aa		2.65	□□□□□ -1.99
VTA1	YLR181C	YGR035W-A	Q45U48	73 aa		2.65	□□□□□ -1.99
VTA1	YLR181C	FUN14	P18411	198 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	YCR023C	P25351	611 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	YKL102C	P34249	101 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	YER076C	P40049	302 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	YER135C	P40082	130 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	YNL217W	P40152	326 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	BRP1	P53194	125 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	PKR1	Q03880	122 aa	Known RBP	2.64	□□□□□ -1.99
VTA1	YLR181C	FYV7	Q12247	151 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	MEC1	P38111	2368 aa		2.64	□□□□□ -1.99
VTA1	YLR181C	VAR1	P02381	398 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	YHR212W-A	P0CX91	67 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	MRPL44	P19956	98 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	MPC2	P38857	129 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	YNR077C	P53758	84 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	POP3	P53833	195 aa	Predicted RBP	2.63	□□□□□ -1.99
VTA1	YLR181C	YIL014C-A	Q02598	104 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	TVP18	Q04767	167 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	YBR200W-A	Q3E755	54 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	YPR014C	Q6B0W2	109 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	YFR032C-B	Q8TGU2	87 aa		2.63	□□□□□ -1.99
VTA1	YLR181C	ATP5	P09457	212 aa		2.62	□□□□□ -1.99
VTA1	YLR181C	BET1	P22804	142 aa		2.62	□□□□□ -1.99
VTA1	YLR181C	FYV4	P38783	130 aa	Predicted RBP	2.62	□□□□□ -1.99
VTA1	YLR181C	YFR035C	P43608	114 aa		2.62	□□□□□ -1.99
VTA1	YLR181C	YDR366C	P87287	132 aa		2.62	□□□□□ -1.99
VTA1	YLR181C	MGR2	Q02889	113 aa		2.62	□□□□□ -1.99
VTA1	YLR181C	AIM34	Q03673	198 aa		2.62	□□□□□ -1.99
VTA1	YLR181C	YLR050C	Q12155	161 aa	Known RBP	2.62	□□□□□ -1.99
VTA1	YLR181C	PFY1	P07274	126 aa		2.61	□□□□□ -1.99
VTA1	YLR181C	RPL2A	P0CX45	254 aa	Known RBP	2.61	□□□□□ -1.99
VTA1	YLR181C	RPL2B	P0CX46	254 aa	Known RBP	2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms