RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C CDC43P18898 376 aa4.57□□□□□ -1.68
SSK1YLR006C YCR022CP25620 114 aa4.57□□□□□ -1.68
SSK1YLR006C EDC2P40023 145 aaPredicted RBP4.57□□□□□ -1.68
SSK1YLR006C SMD1Q02260 146 aaPredicted RBP4.57□□□□□ -1.68
SSK1YLR006C HTL1Q9URQ5 78 aa4.57□□□□□ -1.68
SSK1YLR006C SEC11P15367 167 aa4.57□□□□□ -1.68
SSK1YLR006C RPL16AP26784 199 aaKnown RBP4.57□□□□□ -1.68
SSK1YLR006C SFT2P38166 215 aa4.57□□□□□ -1.68
SSK1YLR006C TDA8Q6B2U8 126 aa4.57□□□□□ -1.68
SSK1YLR006C YMR105W-AQ8TGS8 64 aa4.57□□□□□ -1.68
SSK1YLR006C AGA1P32323 725 aa4.56□□□□□ -1.68
SSK1YLR006C FPR2P32472 135 aa4.56□□□□□ -1.68
SSK1YLR006C LST8P41318 303 aa4.56□□□□□ -1.68
SSK1YLR006C YFL051CP43552 160 aa4.56□□□□□ -1.68
SSK1YLR006C YNR064CP53750 290 aa4.56□□□□□ -1.68
SSK1YLR006C MRPL31P14063 131 aaPredicted RBP4.55□□□□□ -1.68
SSK1YLR006C SMP1P38128 452 aa4.55□□□□□ -1.68
SSK1YLR006C PAU7P39545 55 aa4.55□□□□□ -1.68
SSK1YLR006C YFL019CP43576 117 aa4.55□□□□□ -1.68
SSK1YLR006C CTR2P38865 189 aa4.55□□□□□ -1.68
SSK1YLR006C YGL193CP53097 103 aa4.55□□□□□ -1.68
SSK1YLR006C POP3P53833 195 aaPredicted RBP4.55□□□□□ -1.68
SSK1YLR006C SWT21P53873 357 aaPredicted RBP4.55□□□□□ -1.68
SSK1YLR006C DAD4P69851 72 aa4.55□□□□□ -1.68
SSK1YLR006C YMR141CP40211 102 aa4.54□□□□□ -1.68
SSK1YLR006C CWP2P43497 92 aa4.54□□□□□ -1.68
SSK1YLR006C SED1Q01589 338 aa4.54□□□□□ -1.68
SSK1YLR006C AYT1Q12226 474 aa4.54□□□□□ -1.68
SSK1YLR006C KSH1Q8TGJ3 72 aa4.54□□□□□ -1.68
SSK1YLR006C DDR48P18899 430 aaKnown RBP4.54□□□□□ -1.68
SSK1YLR006C YCR050CP25630 102 aa4.54□□□□□ -1.68
SSK1YLR006C YFL065CP43539 102 aa4.54□□□□□ -1.68
SSK1YLR006C YPI1P43587 155 aa4.54□□□□□ -1.68
SSK1YLR006C BRP1P53194 125 aa4.54□□□□□ -1.68
SSK1YLR006C YLR281CQ05863 155 aa4.54□□□□□ -1.68
SSK1YLR006C IRC25Q07951 179 aa4.54□□□□□ -1.68
SSK1YLR006C YPR203WQ08994 102 aa4.54□□□□□ -1.68
SSK1YLR006C DAD1Q12248 94 aa4.54□□□□□ -1.68
SSK1YLR006C VMA11P32842 164 aa4.53□□□□□ -1.68
SSK1YLR006C RRT1P38192 103 aa4.52□□□□□ -1.69
SSK1YLR006C JID1Q12350 301 aa4.52□□□□□ -1.69
SSK1YLR006C YPR170W-BP0C5R9 85 aa4.52□□□□□ -1.69
SSK1YLR006C YLR363W-AQ3E747 85 aa4.52□□□□□ -1.69
SSK1YLR006C YKR045CP36138 183 aa4.51□□□□□ -1.69
SSK1YLR006C YIL012WP40551 113 aa4.51□□□□□ -1.69
SSK1YLR006C YAL063C-AQ3E791 96 aa4.51□□□□□ -1.69
SSK1YLR006C YBL008W-AQ3E821 79 aa4.51□□□□□ -1.69
SSK1YLR006C YAL064WP39711 94 aa4.51□□□□□ -1.69
SSK1YLR006C VTC1P40046 129 aaRIP-Chip data4.51□□□□□ -1.69not detected
SSK1YLR006C YLR112WQ12130 139 aa4.51□□□□□ -1.69
SSK1YLR006C IRC23Q08416 157 aa4.5□□□□□ -1.69
SSK1YLR006C TIM22Q12328 207 aa4.5□□□□□ -1.69
SSK1YLR006C ECM12O13529 151 aa4.49□□□□□ -1.69
SSK1YLR006C TRP1P00912 224 aa4.49□□□□□ -1.69
SSK1YLR006C YHR213WP0CI67 198 aa4.49□□□□□ -1.69
SSK1YLR006C YOL014WQ08110 124 aa4.49□□□□□ -1.69
SSK1YLR006C FYV12Q08559 129 aa4.49□□□□□ -1.69
SSK1YLR006C YML100W-AQ8TGT0 57 aa4.49□□□□□ -1.69
SSK1YLR006C RAD6P06104 172 aa4.49□□□□□ -1.69
SSK1YLR006C ATP15P21306 62 aa4.49□□□□□ -1.69
SSK1YLR006C YGL260WP53056 76 aa4.49□□□□□ -1.69
SSK1YLR006C YGR164WP53291 111 aa4.49□□□□□ -1.69
SSK1YLR006C MIX17Q03667 156 aa4.49□□□□□ -1.69
SSK1YLR006C YCL048W-AQ2V2Q2 79 aa4.49□□□□□ -1.69
SSK1YLR006C YKR032WP36127 104 aa4.48□□□□□ -1.69
SSK1YLR006C YER135CP40082 130 aa4.48□□□□□ -1.69
SSK1YLR006C YIL014C-AQ02598 104 aa4.48□□□□□ -1.69
SSK1YLR006C YMR181CQ03231 154 aa4.48□□□□□ -1.69
SSK1YLR006C YML079WQ03629 201 aa4.48□□□□□ -1.69
SSK1YLR006C GPI19Q04082 140 aa4.48□□□□□ -1.69
SSK1YLR006C YPL278CQ08990 100 aa4.48□□□□□ -1.69
SSK1YLR006C RRT15Q3E811 62 aa4.48□□□□□ -1.69
SSK1YLR006C MIC10Q96VH5 97 aa4.48□□□□□ -1.69
SSK1YLR006C YHL037CP38733 133 aa4.48□□□□□ -1.69
SSK1YLR006C IMP2P46972 177 aa4.48□□□□□ -1.69
SSK1YLR006C PAI3P01094 68 aa4.47□□□□□ -1.69
SSK1YLR006C NCA3P46955 337 aa4.47□□□□□ -1.69
SSK1YLR006C MRPL38P35996 138 aaPredicted RBP4.46□□□□□ -1.69
SSK1YLR006C MSA2P36157 363 aa4.46□□□□□ -1.69
SSK1YLR006C YNL198CP40166 100 aa4.46□□□□□ -1.69
SSK1YLR006C KNH1P50112 268 aa4.46□□□□□ -1.7
SSK1YLR006C UBC4P15731 148 aa4.45□□□□□ -1.7
SSK1YLR006C YJL027CP47063 138 aaPredicted RBP4.45□□□□□ -1.7
SSK1YLR006C YLR342W-AQ3E810 57 aa4.45□□□□□ -1.7
SSK1YLR006C YHL042WP38729 150 aa4.45□□□□□ -1.7
SSK1YLR006C YFR035CP43608 114 aa4.45□□□□□ -1.7
SSK1YLR006C PRM3Q08931 133 aa4.45□□□□□ -1.7
SSK1YLR006C TRA1P38811 3744 aa4.44□□□□□ -1.7
SSK1YLR006C YDR042CQ03205 200 aa4.44□□□□□ -1.7
SSK1YLR006C TOR2P32600 2474 aaKnown RBP4.44□□□□□ -1.7
SSK1YLR006C YKL044WP36092 106 aa4.43□□□□□ -1.7
SSK1YLR006C GPI18P38211 433 aa4.43□□□□□ -1.7
SSK1YLR006C YLR156WP0CE96 114 aa4.43□□□□□ -1.7
SSK1YLR006C YLR159WP0CE97 114 aa4.43□□□□□ -1.7
SSK1YLR006C YLR161WP0CE98 114 aa4.43□□□□□ -1.7
SSK1YLR006C BET1P22804 142 aa4.43□□□□□ -1.7
SSK1YLR006C SNF11P38956 169 aa4.43□□□□□ -1.7
SSK1YLR006C YIL102C-AQ2V2P5 75 aa4.43□□□□□ -1.7
SSK1YLR006C HMRA2P0CY13 119 aa4.42□□□□□ -1.7
SSK1YLR006C COX14P39103 70 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms