RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	PAU6	P0CE90	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PAU18	P0CE91	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PAU8	P0CE92	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PAU11	P0CE93	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	MRPL39	P36533	70 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PAU13	P38725	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	RSM18	P40033	138 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	YFL015C	P43578	164 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	BRP1	P53194	125 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PAU10	Q03050	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PIR3	Q03180	325 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PAU20	Q08322	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	PAU9	Q3E770	120 aa		2.68	□□□□□ -1.98
PEX1	YKL197C	YMR181C	Q03231	154 aa		2.67	□□□□□ -1.98
PEX1	YKL197C	EMI1	Q04406	187 aa		2.67	□□□□□ -1.98
PEX1	YKL197C	YDR524C-B	Q3E6R4	66 aa		2.67	□□□□□ -1.98
PEX1	YKL197C	SOD1	P00445	154 aa	Known RBP	2.67	□□□□□ -1.98
PEX1	YKL197C	PIS1	P06197	220 aa	Known RBP	2.67	□□□□□ -1.98
PEX1	YKL197C	PAU24	P38155	120 aa		2.67	□□□□□ -1.98
PEX1	YKL197C	PAU4	P53427	120 aa		2.67	□□□□□ -1.98
PEX1	YKL197C	YPL261C	Q08976	102 aa		2.67	□□□□□ -1.98
PEX1	YKL197C	RPL26A	P05743	127 aa	Known RBP	2.66	□□□□□ -1.98
PEX1	YKL197C	PFY1	P07274	126 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	AGA1	P32323	725 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	EDC2	P40023	145 aa	Predicted RBP	2.66	□□□□□ -1.98
PEX1	YKL197C	MIX17	Q03667	156 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	YOL014W	Q08110	124 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	YKL023C-A	Q2V2P3	75 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	ATP15	P21306	62 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	FYV5	P25585	152 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	TVP23	P38962	199 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	PBA1	Q05778	276 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	YOR192C-C	Q3E736	78 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	YOR381W-A	Q3E804	55 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	YHR214C-D	P0CX93	97 aa		2.66	□□□□□ -1.98
PEX1	YKL197C	HUR1	P45820	110 aa		2.65	□□□□□ -1.98
PEX1	YKL197C	CRC1	Q12289	327 aa		2.65	□□□□□ -1.98
PEX1	YKL197C	TIM22	Q12328	207 aa		2.65	□□□□□ -1.98
PEX1	YKL197C	RPS22B	Q3E7Y3	130 aa	Known RBP	2.65	□□□□□ -1.98
PEX1	YKL197C	RPS14B	P39516	138 aa	Known RBP	2.65	□□□□□ -1.99
PEX1	YKL197C	NCA3	P46955	337 aa		2.65	□□□□□ -1.99
PEX1	YKL197C	IMP2	P46972	177 aa		2.64	□□□□□ -1.99
PEX1	YKL197C	STT4	P37297	1900 aa		2.64	□□□□□ -1.99
PEX1	YKL197C	ERI1	P62651	68 aa	Known RBP	2.64	□□□□□ -1.99
PEX1	YKL197C	ATP20	Q12233	115 aa		2.64	□□□□□ -1.99
PEX1	YKL197C	RPS22A	P0C0W1	130 aa	Known RBP	2.64	□□□□□ -1.99
PEX1	YKL197C	YHP1	Q04116	353 aa		2.64	□□□□□ -1.99
PEX1	YKL197C	IRC23	Q08416	157 aa		2.64	□□□□□ -1.99
PEX1	YKL197C	YSY6	P38374	65 aa		2.63	□□□□□ -1.99
PEX1	YKL197C	YHR173C	P38864	112 aa		2.63	□□□□□ -1.99
PEX1	YKL197C	TRS23	Q03784	219 aa		2.63	□□□□□ -1.99
PEX1	YKL197C	YPR011C	Q12251	326 aa		2.63	□□□□□ -1.99
PEX1	YKL197C	HHF1	P02309	103 aa	Known RBP	2.63	□□□□□ -1.99
PEX1	YKL197C	YDR034W-B	Q6Q5X2	51 aa		2.63	□□□□□ -1.99
PEX1	YKL197C	YER145C-A	A0A023PYF4	145 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	SPG1	P50088	95 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	YDR246W-A	Q3E763	66 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	QCR10	P37299	77 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	RPR2	P40571	144 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	SPG3	Q04398	127 aa	Predicted RBP	2.62	□□□□□ -1.99
PEX1	YKL197C	PPT2	Q12036	173 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	YAR023C	D6VPM8	179 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	YIL163C	P40448	117 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	YGL118C	P53132	145 aa		2.62	□□□□□ -1.99
PEX1	YKL197C	YHR180W	P38868	163 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	EDC1	P53080	175 aa	Predicted RBP	2.61	□□□□□ -1.99
PEX1	YKL197C	SED1	Q01589	338 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	SRL1	Q08673	210 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	BSC1	Q12140	328 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	YBL008W-A	Q3E821	79 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	ROX3	P25046	220 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	YCR041W	P37265	110 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	YFL051C	P43552	160 aa		2.61	□□□□□ -1.99
PEX1	YKL197C	YLR156W	P0CE96	114 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	YLR159W	P0CE97	114 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	YLR161W	P0CE98	114 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	RPL23A	P0CX41	137 aa	Known RBP	2.6	□□□□□ -1.99
PEX1	YKL197C	RPL23B	P0CX42	137 aa	Known RBP	2.6	□□□□□ -1.99
PEX1	YKL197C	YML122C	Q03207	126 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	YOR343C	Q12484	108 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	CDC39	P25655	2108 aa	Known RBP	2.6	□□□□□ -1.99
PEX1	YKL197C	MSA2	P36157	363 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	AIM4	P38305	123 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX1	YKL197C	YEL067C	P39978	195 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	MPC3	P53311	146 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	YGR121W-A	Q3E816	71 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	COA2	Q3E823	68 aa		2.6	□□□□□ -1.99
PEX1	YKL197C	MRPL27	P36526	146 aa	Predicted RBP	2.59	□□□□□ -1.99
PEX1	YKL197C	SOM1	Q05676	74 aa		2.59	□□□□□ -1.99
PEX1	YKL197C	SPC1	P46965	94 aa		2.59	□□□□□ -1.99
PEX1	YKL197C	UTH1	P36135	365 aa		2.59	□□□□□ -2
PEX1	YKL197C	RRT1	P38192	103 aa		2.59	□□□□□ -2
PEX1	YKL197C	CRH1	P53301	507 aa		2.59	□□□□□ -2
PEX1	YKL197C	RGM1	Q00453	211 aa		2.59	□□□□□ -2
PEX1	YKL197C	IRC19	Q07843	230 aa		2.59	□□□□□ -2
PEX1	YKL197C	YBL071C	P38185	102 aa		2.58	□□□□□ -2
PEX1	YKL197C	YEL073C	P39974	107 aa		2.58	□□□□□ -2
PEX1	YKL197C	MET31	Q03081	177 aa		2.58	□□□□□ -2
PEX1	YKL197C	YDL241W	Q07738	123 aa		2.58	□□□□□ -2
PEX1	YKL197C	YPL278C	Q08990	100 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms