RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	RPL15A	P05748	204 aa	Known RBP	3.12	□□□□□ -1.91
SPT23	YKL020C	RPL42A	P0CX27	106 aa	Known RBP	3.12	□□□□□ -1.91
SPT23	YKL020C	RPL42B	P0CX28	106 aa	Known RBP	3.12	□□□□□ -1.91
SPT23	YKL020C	YHR173C	P38864	112 aa		3.12	□□□□□ -1.91
SPT23	YKL020C	PET8	P38921	284 aa		3.12	□□□□□ -1.91
SPT23	YKL020C	YNL217W	P40152	326 aa		3.12	□□□□□ -1.91
SPT23	YKL020C	KEG1	P43614	200 aa		3.12	□□□□□ -1.91
SPT23	YKL020C	RPL15B	P54780	204 aa	Predicted RBP	3.12	□□□□□ -1.91
SPT23	YKL020C	RPS8A	P0CX39	200 aa	Known RBP	3.11	□□□□□ -1.91
SPT23	YKL020C	RPS8B	P0CX40	200 aa	Known RBP	3.11	□□□□□ -1.91
SPT23	YKL020C	FPR2	P32472	135 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	MRPL39	P36533	70 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	PAU7	P39545	55 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	YOR268C	Q08734	132 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	HHF1	P02309	103 aa	Known RBP	3.11	□□□□□ -1.91
SPT23	YKL020C	SIM1	P40472	476 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	ICS3	P47034	131 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	SPG1	P50088	95 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	API2	Q04413	109 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	MET32	Q12041	191 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	YPR053C	Q6Q5F3	151 aa		3.11	□□□□□ -1.91
SPT23	YKL020C	RPL11A	P0C0W9	174 aa	Known RBP	3.1	□□□□□ -1.91
SPT23	YKL020C	DSE2	P38844	325 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	HUR1	P45820	110 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	RPL11B	Q3E757	174 aa	Predicted RBP	3.1	□□□□□ -1.91
SPT23	YKL020C	LDB16	P25587	256 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	RSM18	P40033	138 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	PCP1	P53259	346 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	YMR181C	Q03231	154 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	IRC23	Q08416	157 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	YDL022C-A	P0C5L6	82 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	YKL097C	P34245	136 aa		3.1	□□□□□ -1.91
SPT23	YKL020C	WWM1	P43582	211 aa	Known RBP	3.1	□□□□□ -1.91
SPT23	YKL020C	YHR214C-D	P0CX93	97 aa		3.09	□□□□□ -1.91
SPT23	YKL020C	RPL32	P38061	130 aa	Known RBP	3.09	□□□□□ -1.91
SPT23	YKL020C	YSY6	P38374	65 aa		3.09	□□□□□ -1.91
SPT23	YKL020C	YDR274C	P87283	123 aa		3.09	□□□□□ -1.91
SPT23	YKL020C	YOL118C	Q08259	102 aa		3.09	□□□□□ -1.91
SPT23	YKL020C	YDR246W-A	Q3E763	66 aa		3.09	□□□□□ -1.91
SPT23	YKL020C	YKR032W	P36127	104 aa		3.09	□□□□□ -1.92
SPT23	YKL020C	ECO1	P43605	281 aa		3.09	□□□□□ -1.92
SPT23	YKL020C	TDA2	P40045	126 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YFL051C	P43552	160 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	TOM7	P53507	60 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YMR295C	Q03559	197 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	FIT2	Q08906	153 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YPL261C	Q08976	102 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YOR343C	Q12484	108 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YAL064W	P39711	94 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	VTC1	P40046	129 aa	RIP-Chip data	3.08	□□□□□ -1.92	not detected
SPT23	YKL020C	HUA1	P40325	198 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	NRM1	P53718	249 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	MGR2	Q02889	113 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YHP1	Q04116	353 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	AIR2	Q12476	344 aa	Known RBP	3.08	□□□□□ -1.92
SPT23	YKL020C	MDM35	O60200	86 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YHL005C	P38752	130 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	TIM22	Q12328	207 aa		3.08	□□□□□ -1.92
SPT23	YKL020C	YAL064W-B	O13512	126 aa		3.07	□□□□□ -1.92
SPT23	YKL020C	YNL208W	P40159	199 aa	Known RBP	3.07	□□□□□ -1.92
SPT23	YKL020C	NCA3	P46955	337 aa		3.07	□□□□□ -1.92
SPT23	YKL020C	PPT2	Q12036	173 aa		3.07	□□□□□ -1.92
SPT23	YKL020C	PFY1	P07274	126 aa		3.07	□□□□□ -1.92
SPT23	YKL020C	PBA1	Q05778	276 aa		3.07	□□□□□ -1.92
SPT23	YKL020C	YOR192C-C	Q3E736	78 aa		3.07	□□□□□ -1.92
SPT23	YKL020C	CDC39	P25655	2108 aa	Known RBP	3.07	□□□□□ -1.92
SPT23	YKL020C	SPI1	P40092	148 aa		3.06	□□□□□ -1.92
SPT23	YKL020C	YAL065C	O13511	128 aa		3.06	□□□□□ -1.92
SPT23	YKL020C	RPL26A	P05743	127 aa	Known RBP	3.06	□□□□□ -1.92
SPT23	YKL020C	DDR48	P18899	430 aa	Known RBP	3.06	□□□□□ -1.92
SPT23	YKL020C	CYR1	P08678	2026 aa	Known RBP	3.06	□□□□□ -1.92
SPT23	YKL020C	CTR2	P38865	189 aa		3.06	□□□□□ -1.92
SPT23	YKL020C	AIM19	P40502	157 aa		3.06	□□□□□ -1.92
SPT23	YKL020C	COA3	Q3E7B2	85 aa		3.06	□□□□□ -1.92
SPT23	YKL020C	YER135C	P40082	130 aa		3.05	□□□□□ -1.92
SPT23	YKL020C	YFR032C-B	Q8TGU2	87 aa		3.05	□□□□□ -1.92
SPT23	YKL020C	SAP30	P38429	201 aa		3.05	□□□□□ -1.92
SPT23	YKL020C	YOL014W	Q08110	124 aa		3.05	□□□□□ -1.92
SPT23	YKL020C	CRC1	Q12289	327 aa		3.05	□□□□□ -1.92
SPT23	YKL020C	NCE101	Q02820	53 aa		3.04	□□□□□ -1.92
SPT23	YKL020C	YOR314W	Q12506	109 aa		3.04	□□□□□ -1.92
SPT23	YKL020C	YLR111W	Q12528	110 aa		3.04	□□□□□ -1.92
SPT23	YKL020C	YGL258W-A	Q3E740	77 aa		3.04	□□□□□ -1.92
SPT23	YKL020C	YGR121W-A	Q3E816	71 aa		3.04	□□□□□ -1.92
SPT23	YKL020C	IMP2	P46972	177 aa		3.04	□□□□□ -1.92
SPT23	YKL020C	YGR045C	P53229	120 aa		3.04	□□□□□ -1.92
SPT23	YKL020C	FYV5	P25585	152 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	MIG3	P39943	394 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	YLR162W	Q06235	118 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	HMRA2	P0CY13	119 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	AGA1	P32323	725 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	MTC6	P38849	526 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	MPC2	P38857	129 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	ERI1	P62651	68 aa	Known RBP	3.03	□□□□□ -1.92
SPT23	YKL020C	YOR381W-A	Q3E804	55 aa		3.03	□□□□□ -1.92
SPT23	YKL020C	TOS6	P48560	102 aa		3.02	□□□□□ -1.93
SPT23	YKL020C	YLR194C	Q05777	254 aa		3.02	□□□□□ -1.93
SPT23	YKL020C	AIM4	P38305	123 aa	Predicted RBP	3.02	□□□□□ -1.93
SPT23	YKL020C	YML122C	Q03207	126 aa		3.02	□□□□□ -1.93
SPT23	YKL020C	YBR209W	P38311	105 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms