RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W YOR289WQ12012 251 aaPredicted RBP0.4□□□□□ -2.35
HIT1YJR055W UBI4P0CG63 381 aaKnown RBP0.39□□□□□ -2.35
HIT1YJR055W RGI1P40043 161 aaPredicted RBP0.39□□□□□ -2.35
HIT1YJR055W RPS29BP41058 56 aaKnown RBP0.39□□□□□ -2.35
HIT1YJR055W YJL009WP47078 108 aa0.39□□□□□ -2.35
HIT1YJR055W MGR2Q02889 113 aa0.39□□□□□ -2.35
HIT1YJR055W YKL018C-AQ3E7A7 99 aa0.39□□□□□ -2.35
HIT1YJR055W MHF2Q3E829 80 aa0.39□□□□□ -2.35
HIT1YJR055W YLL066W-BQ8TGJ7 56 aa0.39□□□□□ -2.35
HIT1YJR055W RPS22AP0C0W1 130 aaKnown RBP0.38□□□□□ -2.35
HIT1YJR055W YOL013W-AP0C272 63 aaPredicted RBP0.38□□□□□ -2.35
HIT1YJR055W INO4P13902 151 aa0.38□□□□□ -2.35
HIT1YJR055W PHO13P19881 312 aa0.38□□□□□ -2.35
HIT1YJR055W RPS1BP23248 255 aaKnown RBP0.38□□□□□ -2.35
HIT1YJR055W ARC19P33204 171 aaKnown RBP0.38□□□□□ -2.35
HIT1YJR055W MRPL38P35996 138 aaPredicted RBP0.38□□□□□ -2.35
HIT1YJR055W AME1P38313 324 aa0.38□□□□□ -2.35
HIT1YJR055W DLS1P40366 167 aa0.38□□□□□ -2.35
HIT1YJR055W MPC1P53157 130 aaKnown RBP0.38□□□□□ -2.35
HIT1YJR055W YPD1Q07688 167 aa0.38□□□□□ -2.35
HIT1YJR055W YOL131WQ08270 108 aa0.38□□□□□ -2.35
HIT1YJR055W RPS22BQ3E7Y3 130 aaKnown RBP0.38□□□□□ -2.35
HIT1YJR055W RIB3Q99258 208 aa0.38□□□□□ -2.35
HIT1YJR055W IPT1P38954 527 aa0.37□□□□□ -2.35
HIT1YJR055W SPC1P46965 94 aa0.37□□□□□ -2.35
HIT1YJR055W ORM1P53224 222 aa0.37□□□□□ -2.35
HIT1YJR055W COA4Q05809 96 aa0.37□□□□□ -2.35
HIT1YJR055W YPR153WQ06537 140 aa0.37□□□□□ -2.35
HIT1YJR055W HUT1Q12520 339 aa0.37□□□□□ -2.35
HIT1YJR055W RRT15Q3E811 62 aa0.37□□□□□ -2.35
HIT1YJR055W RTC6O14464 93 aa0.36□□□□□ -2.35
HIT1YJR055W RPS11AP0CX47 156 aaKnown RBP0.36□□□□□ -2.35
HIT1YJR055W RPS11BP0CX48 156 aaKnown RBP0.36□□□□□ -2.35
HIT1YJR055W TLG1Q03322 224 aa0.36□□□□□ -2.35
HIT1YJR055W IRC21Q04772 201 aa0.36□□□□□ -2.35
HIT1YJR055W YOR011W-AQ3E807 68 aa0.36□□□□□ -2.35
HIT1YJR055W YOS1Q3E834 85 aa0.36□□□□□ -2.35
HIT1YJR055W ADK1P07170 222 aaKnown RBP0.35□□□□□ -2.35
HIT1YJR055W SNU13P39990 126 aaKnown RBP0.35□□□□□ -2.35
HIT1YJR055W AIM19P40502 157 aa0.35□□□□□ -2.35
HIT1YJR055W YGR201CP42936 225 aa0.35□□□□□ -2.35
HIT1YJR055W GPI2P46961 280 aa0.35□□□□□ -2.35
HIT1YJR055W YGR025WP53216 100 aa0.35□□□□□ -2.35
HIT1YJR055W RPL22BP56628 122 aaKnown RBP0.35□□□□□ -2.35
HIT1YJR055W SPC3Q12133 184 aa0.35□□□□□ -2.35
HIT1YJR055W YOR192C-CQ3E736 78 aa0.35□□□□□ -2.35
HIT1YJR055W RPL33AP05744 107 aaKnown RBP0.34□□□□□ -2.36
HIT1YJR055W NHP6AP11632 93 aaKnown RBP0.34□□□□□ -2.36
HIT1YJR055W DER1P38307 211 aa0.34□□□□□ -2.36
HIT1YJR055W POR2P40478 281 aa0.34□□□□□ -2.36
HIT1YJR055W LST8P41318 303 aa0.34□□□□□ -2.36
HIT1YJR055W YGL149WP53116 101 aa0.34□□□□□ -2.36
HIT1YJR055W EST3Q03096 181 aa0.34□□□□□ -2.36
HIT1YJR055W GPI11Q06636 219 aa0.34□□□□□ -2.36
HIT1YJR055W YOL118CQ08259 102 aa0.34□□□□□ -2.36
HIT1YJR055W YDR029WQ12111 104 aa0.34□□□□□ -2.36
HIT1YJR055W YCR075W-AQ3E830 75 aa0.34□□□□□ -2.36
HIT1YJR055W HHY1P39982 102 aa0.33□□□□□ -2.36
HIT1YJR055W RAV2Q03956 351 aa0.33□□□□□ -2.36
HIT1YJR055W UBC4P15731 148 aa0.32□□□□□ -2.36
HIT1YJR055W BUD23P25627 275 aaPredicted RBP0.32□□□□□ -2.36
HIT1YJR055W MRPL24P36525 258 aaPredicted RBP0.32□□□□□ -2.36
HIT1YJR055W SLM6P38343 150 aa0.32□□□□□ -2.36
HIT1YJR055W SNF11P38956 169 aa0.32□□□□□ -2.36
HIT1YJR055W YER181CP40097 107 aa0.32□□□□□ -2.36
HIT1YJR055W EMC5P40540 141 aa0.32□□□□□ -2.36
HIT1YJR055W GLC8P41818 229 aa0.32□□□□□ -2.36
HIT1YJR055W YGR240C-AQ3E786 66 aa0.32□□□□□ -2.36
HIT1YJR055W COA6Q3E846 104 aa0.32□□□□□ -2.36
HIT1YJR055W YCR101CP25607 182 aa0.31□□□□□ -2.36
HIT1YJR055W SRP21P32342 167 aa0.31□□□□□ -2.36
HIT1YJR055W YBR013CP38215 129 aa0.31□□□□□ -2.36
HIT1YJR055W RPS20P38701 121 aaKnown RBP0.31□□□□□ -2.36
HIT1YJR055W YMR141CP40211 102 aa0.31□□□□□ -2.36
HIT1YJR055W YLR194CQ05777 254 aa0.31□□□□□ -2.36
HIT1YJR055W NSL1Q12143 216 aa0.31□□□□□ -2.36
HIT1YJR055W RPL14AP36105 138 aaKnown RBP0.3□□□□□ -2.36
HIT1YJR055W RPL14BP38754 138 aaKnown RBP0.3□□□□□ -2.36
HIT1YJR055W DIE2P50076 525 aa0.3□□□□□ -2.36
HIT1YJR055W YDR210WQ03482 75 aa0.3□□□□□ -2.36
HIT1YJR055W YMR122CQ03879 124 aa0.3□□□□□ -2.36
HIT1YJR055W KTI11Q3E840 82 aa0.3□□□□□ -2.36
HIT1YJR055W PET20Q99373 253 aa0.3□□□□□ -2.36
HIT1YJR055W YPR010C-AA5Z2X5 72 aa0.29□□□□□ -2.36
HIT1YJR055W PFY1P07274 126 aa0.29□□□□□ -2.36
HIT1YJR055W YGL014C-AP0C5N1 53 aa0.29□□□□□ -2.36
HIT1YJR055W PET54P10834 293 aa0.29□□□□□ -2.36
HIT1YJR055W HSP12P22943 109 aaKnown RBP0.29□□□□□ -2.36
HIT1YJR055W ATG8P38182 117 aaRIP-Chip data0.29□□□□□ -2.36not detected
HIT1YJR055W IMP2P46972 177 aa0.29□□□□□ -2.36
HIT1YJR055W VMA10P48836 114 aaKnown RBP0.29□□□□□ -2.36
HIT1YJR055W SPG1P50088 95 aa0.29□□□□□ -2.36
HIT1YJR055W SNA2P56508 79 aa0.29□□□□□ -2.36
HIT1YJR055W YMR320WQ04897 101 aa0.29□□□□□ -2.36
HIT1YJR055W YLR042CQ07990 161 aa0.29□□□□□ -2.36
HIT1YJR055W SCS22Q6Q595 175 aa0.29□□□□□ -2.36
HIT1YJR055W YHR213WP0CI67 198 aa0.28□□□□□ -2.36
HIT1YJR055W YBL071CP38185 102 aa0.28□□□□□ -2.36
HIT1YJR055W YHR138CP38841 114 aaPredicted RBP0.28□□□□□ -2.36
HIT1YJR055W YHR140WP38842 239 aa0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms