RNA–Protein interactions for RNA: YIR042C

YIR042C, Transcript of Putative protein of unknown function, yeast

Gene YIR042C, Length 711 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR042C	YIR042C	RRT13	P40042	185 aa		4.65	□□□□□ -1.67
YIR042C	YIR042C	SIM1	P40472	476 aa		4.65	□□□□□ -1.67
YIR042C	YIR042C	MRPS12	P53732	153 aa		4.65	□□□□□ -1.67
YIR042C	YIR042C	RPL16A	P26784	199 aa	Known RBP	4.64	□□□□□ -1.67
YIR042C	YIR042C	YCR041W	P37265	110 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	OXA1	P39952	402 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	CIN5	P40917	295 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	DCV1	P43595	202 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	YML079W	Q03629	201 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	AIM34	Q03673	198 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	MRPS8	Q03799	155 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	YOR008C-A	Q3E7B9	74 aa		4.64	□□□□□ -1.67
YIR042C	YIR042C	HYP2	P23301	157 aa	Known RBP	4.63	□□□□□ -1.67
YIR042C	YIR042C	AIM11	P87275	137 aa		4.63	□□□□□ -1.67
YIR042C	YIR042C	ELC1	Q03071	99 aa		4.63	□□□□□ -1.67
YIR042C	YIR042C	SRL1	Q08673	210 aa		4.63	□□□□□ -1.67
YIR042C	YIR042C	PAI3	P01094	68 aa		4.62	□□□□□ -1.67
YIR042C	YIR042C	YOR097C	Q12274	175 aa	Predicted RBP	4.62	□□□□□ -1.67
YIR042C	YIR042C	CDC43	P18898	376 aa		4.61	□□□□□ -1.67
YIR042C	YIR042C	RPL32	P38061	130 aa	Known RBP	4.61	□□□□□ -1.67
YIR042C	YIR042C	YLR042C	Q07990	161 aa		4.61	□□□□□ -1.67
YIR042C	YIR042C	PRM3	Q08931	133 aa		4.61	□□□□□ -1.67
YIR042C	YIR042C	Q0255	P03881	472 aa		4.6	□□□□□ -1.67
YIR042C	YIR042C	ATP15	P21306	62 aa		4.6	□□□□□ -1.67
YIR042C	YIR042C	RPB9	P27999	122 aa		4.6	□□□□□ -1.67
YIR042C	YIR042C	VHS2	P40463	436 aa		4.6	□□□□□ -1.67
YIR042C	YIR042C	AGE2	P40529	298 aa		4.6	□□□□□ -1.67
YIR042C	YIR042C	KEG1	P43614	200 aa		4.6	□□□□□ -1.67
YIR042C	YIR042C	IGO2	Q9P305	131 aa		4.6	□□□□□ -1.67
YIR042C	YIR042C	CYC7	P00045	113 aa		4.59	□□□□□ -1.67
YIR042C	YIR042C	ADH1	P00330	348 aa	Known RBP	4.59	□□□□□ -1.67
YIR042C	YIR042C	ANB1	P19211	157 aa		4.59	□□□□□ -1.67
YIR042C	YIR042C	URM1	P40554	99 aa	Predicted RBP	4.59	□□□□□ -1.67
YIR042C	YIR042C	RUB1	Q03919	77 aa		4.59	□□□□□ -1.67
YIR042C	YIR042C	YLR194C	Q05777	254 aa		4.59	□□□□□ -1.67
YIR042C	YIR042C	TRP1	P00912	224 aa		4.58	□□□□□ -1.68
YIR042C	YIR042C	YPT53	P36019	220 aa		4.58	□□□□□ -1.68
YIR042C	YIR042C	YER181C	P40097	107 aa		4.58	□□□□□ -1.68
YIR042C	YIR042C	YNL217W	P40152	326 aa		4.58	□□□□□ -1.68
YIR042C	YIR042C	CCW14	O13547	238 aa		4.57	□□□□□ -1.68
YIR042C	YIR042C	RPL15A	P05748	204 aa	Known RBP	4.57	□□□□□ -1.68
YIR042C	YIR042C	YHR212W-A	P0CX91	67 aa		4.57	□□□□□ -1.68
YIR042C	YIR042C	UBC5	P15732	148 aa		4.57	□□□□□ -1.68
YIR042C	YIR042C	ARO2	P28777	376 aa	Known RBP	4.57	□□□□□ -1.68
YIR042C	YIR042C	YEL008W	P40001	126 aa		4.57	□□□□□ -1.68
YIR042C	YIR042C	YER085C	P40058	173 aa		4.57	□□□□□ -1.68
YIR042C	YIR042C	YNL190W	P53872	204 aa		4.57	□□□□□ -1.68
YIR042C	YIR042C	YLR122C	Q12312	125 aa		4.57	□□□□□ -1.68
YIR042C	YIR042C	UGX2	P32772	223 aa		4.56	□□□□□ -1.68
YIR042C	YIR042C	AIM29	P36154	155 aa		4.56	□□□□□ -1.68
YIR042C	YIR042C	YIL002W-A	Q3E7Z5	69 aa		4.56	□□□□□ -1.68
YIR042C	YIR042C	YCH1	P42937	148 aa		4.55	□□□□□ -1.68
YIR042C	YIR042C	UTP20	P35194	2493 aa	Known RBP	4.54	□□□□□ -1.68
YIR042C	YIR042C	RPL28	P02406	149 aa	Known RBP	4.54	□□□□□ -1.68
YIR042C	YIR042C	RPS11A	P0CX47	156 aa	Known RBP	4.54	□□□□□ -1.68
YIR042C	YIR042C	RPS11B	P0CX48	156 aa	Known RBP	4.54	□□□□□ -1.68
YIR042C	YIR042C	POP7	P38291	140 aa		4.54	□□□□□ -1.68
YIR042C	YIR042C	KRE9	P39005	276 aa		4.54	□□□□□ -1.68
YIR042C	YIR042C	YGL088W	P53151	121 aa		4.54	□□□□□ -1.68
YIR042C	YIR042C	LSM6	Q06406	86 aa	Known RBP	4.54	□□□□□ -1.68
YIR042C	YIR042C	MID2	P36027	376 aa		4.53	□□□□□ -1.68
YIR042C	YIR042C	YBR219C	P38317	127 aa		4.53	□□□□□ -1.68
YIR042C	YIR042C	MPC2	P38857	129 aa		4.53	□□□□□ -1.68
YIR042C	YIR042C	PEX17	P40155	199 aa		4.53	□□□□□ -1.68
YIR042C	YIR042C	RRG8	Q06109	277 aa		4.53	□□□□□ -1.68
YIR042C	YIR042C	RPL2A	P0CX45	254 aa	Known RBP	4.52	□□□□□ -1.69
YIR042C	YIR042C	RPL2B	P0CX46	254 aa	Known RBP	4.52	□□□□□ -1.69
YIR042C	YIR042C	SHU1	P38751	150 aa		4.52	□□□□□ -1.69
YIR042C	YIR042C	ALG13	P53178	202 aa		4.52	□□□□□ -1.69
YIR042C	YIR042C	RPL18A	P0CX49	186 aa	Known RBP	4.51	□□□□□ -1.69
YIR042C	YIR042C	RPL18B	P0CX50	186 aa	Known RBP	4.51	□□□□□ -1.69
YIR042C	YIR042C	YPS5	P53057	165 aa		4.51	□□□□□ -1.69
YIR042C	YIR042C	SLO1	Q3E784	85 aa		4.51	□□□□□ -1.69
YIR042C	YIR042C	DUT1	P33317	147 aa		4.5	□□□□□ -1.69
YIR042C	YIR042C	YBR209W	P38311	105 aa		4.5	□□□□□ -1.69
YIR042C	YIR042C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
YIR042C	YIR042C	YPL257W	Q08974	193 aa		4.5	□□□□□ -1.69
YIR042C	YIR042C	OST2	P46964	130 aa		4.49	□□□□□ -1.69
YIR042C	YIR042C	COX10	P21592	462 aa		4.48	□□□□□ -1.69
YIR042C	YIR042C	YCL042W	P25572	119 aa		4.48	□□□□□ -1.69
YIR042C	YIR042C	NHP2	P32495	156 aa	Predicted RBP	4.48	□□□□□ -1.69
YIR042C	YIR042C	YIA6	P40556	373 aa		4.48	□□□□□ -1.69
YIR042C	YIR042C	YMR295C	Q03559	197 aa		4.48	□□□□□ -1.69
YIR042C	YIR042C	QCR8	P08525	94 aa		4.47	□□□□□ -1.69
YIR042C	YIR042C	YDR274C	P87283	123 aa		4.47	□□□□□ -1.69
YIR042C	YIR042C	PMP3	P87284	55 aa		4.47	□□□□□ -1.69
YIR042C	YIR042C	HPA2	Q06592	156 aa		4.47	□□□□□ -1.69
YIR042C	YIR042C	RPA12	P32529	125 aa	Known RBP	4.46	□□□□□ -1.7
YIR042C	YIR042C	NRG2	P38082	220 aa		4.46	□□□□□ -1.7
YIR042C	YIR042C	COX14	P39103	70 aa		4.46	□□□□□ -1.7
YIR042C	YIR042C	YCL021W-A	Q96VH3	125 aa		4.46	□□□□□ -1.7
YIR042C	YIR042C	YBR144C	P34215	104 aa		4.45	□□□□□ -1.7
YIR042C	YIR042C	ARC15	P40518	154 aa	RIP-Chip data	4.45	□□□□□ -1.7	not detected
YIR042C	YIR042C	YIL059C	P40520	121 aa		4.45	□□□□□ -1.7
YIR042C	YIR042C	UBC11	P52492	156 aa		4.45	□□□□□ -1.7
YIR042C	YIR042C	YMR122W-A	Q3E842	84 aa		4.45	□□□□□ -1.7
YIR042C	YIR042C	TOA2	P32774	122 aa		4.44	□□□□□ -1.7
YIR042C	YIR042C	EOS1	P53938	366 aa		4.44	□□□□□ -1.7
YIR042C	YIR042C	RGM1	Q00453	211 aa		4.44	□□□□□ -1.7
YIR042C	YIR042C	VAM10	Q08474	114 aa		4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms