RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W YMR175W-AQ3E766 64 aa1.4□□□□□ -2.19
RTT107YHR154W YPR096CO13587 100 aa1.4□□□□□ -2.19
RTT107YHR154W YHR180WP38868 163 aa1.4□□□□□ -2.19
RTT107YHR154W YNL217WP40152 326 aa1.4□□□□□ -2.19
RTT107YHR154W MPC3P53311 146 aa1.4□□□□□ -2.19
RTT107YHR154W YKL023C-AQ2V2P3 75 aa1.4□□□□□ -2.19
RTT107YHR154W CLB6P32943 380 aa1.39□□□□□ -2.19
RTT107YHR154W RPL14AP36105 138 aaKnown RBP1.39□□□□□ -2.19
RTT107YHR154W YPR013CQ12145 317 aa1.39□□□□□ -2.19
RTT107YHR154W TOM6P33448 61 aa1.39□□□□□ -2.19
RTT107YHR154W ATP19P81451 68 aa1.39□□□□□ -2.19
RTT107YHR154W RAD28Q12021 506 aa1.39□□□□□ -2.19
RTT107YHR154W RPB7P34087 171 aa1.38□□□□□ -2.19
RTT107YHR154W MSL1P40567 111 aaPredicted RBP1.38□□□□□ -2.19
RTT107YHR154W IRC19Q07843 230 aa1.38□□□□□ -2.19
RTT107YHR154W YOR268CQ08734 132 aa1.38□□□□□ -2.19
RTT107YHR154W YRA2P36036 203 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
RTT107YHR154W NRG2P38082 220 aa1.38□□□□□ -2.19
RTT107YHR154W FLX1P40464 311 aa1.38□□□□□ -2.19
RTT107YHR154W YDL157CQ12082 118 aa1.38□□□□□ -2.19
RTT107YHR154W YCL048W-AQ2V2Q2 79 aa1.38□□□□□ -2.19
RTT107YHR154W YCR075W-AQ3E830 75 aa1.38□□□□□ -2.19
RTT107YHR154W YLR236CA0A023PZG4 107 aa1.38□□□□□ -2.19
RTT107YHR154W YFR035CP43608 114 aa1.38□□□□□ -2.19
RTT107YHR154W SNN1P48232 102 aa1.38□□□□□ -2.19
RTT107YHR154W FCF2Q12035 217 aaPredicted RBP1.38□□□□□ -2.19
RTT107YHR154W SUS1Q6WNK7 96 aa1.38□□□□□ -2.19
RTT107YHR154W YBR013CP38215 129 aa1.37□□□□□ -2.19
RTT107YHR154W SNU13P39990 126 aaKnown RBP1.37□□□□□ -2.19
RTT107YHR154W AIM19P40502 157 aa1.37□□□□□ -2.19
RTT107YHR154W SMD3P43321 101 aaKnown RBP1.37□□□□□ -2.19
RTT107YHR154W HUR1P45820 110 aa1.37□□□□□ -2.19
RTT107YHR154W FIT3Q08907 204 aa1.37□□□□□ -2.19
RTT107YHR154W DDR48P18899 430 aaKnown RBP1.37□□□□□ -2.19
RTT107YHR154W YMR030W-AQ3E760 96 aa1.37□□□□□ -2.19
RTT107YHR154W ANB1P19211 157 aa1.36□□□□□ -2.19
RTT107YHR154W AUA1P32450 94 aa1.36□□□□□ -2.19
RTT107YHR154W RPB11P38902 120 aa1.36□□□□□ -2.19
RTT107YHR154W MET31Q03081 177 aa1.36□□□□□ -2.19
RTT107YHR154W YML079WQ03629 201 aa1.36□□□□□ -2.19
RTT107YHR154W YDR102CQ03864 110 aa1.36□□□□□ -2.19
RTT107YHR154W CUE4Q04201 117 aaPredicted RBP1.36□□□□□ -2.19
RTT107YHR154W YOR015WQ12169 119 aa1.36□□□□□ -2.19
RTT107YHR154W YCR050CP25630 102 aa1.36□□□□□ -2.19
RTT107YHR154W TIR3P40552 269 aa1.36□□□□□ -2.19
RTT107YHR154W YPR153WQ06537 140 aa1.36□□□□□ -2.19
RTT107YHR154W PRM3Q08931 133 aa1.36□□□□□ -2.19
RTT107YHR154W ATG41Q12048 136 aa1.36□□□□□ -2.19
RTT107YHR154W INO4P13902 151 aa1.36□□□□□ -2.19
RTT107YHR154W MPM1P40364 252 aa1.36□□□□□ -2.19
RTT107YHR154W SOM1Q05676 74 aa1.36□□□□□ -2.19
RTT107YHR154W FMT1P32785 401 aa1.35□□□□□ -2.19
RTT107YHR154W YBR209WP38311 105 aa1.35□□□□□ -2.19
RTT107YHR154W DAN1P47178 298 aa1.35□□□□□ -2.19
RTT107YHR154W ERG25P53045 309 aa1.35□□□□□ -2.19
RTT107YHR154W YMR252CQ04814 134 aa1.35□□□□□ -2.19
RTT107YHR154W YLR296WQ05898 108 aa1.35□□□□□ -2.19
RTT107YHR154W YHL018WP38744 120 aaPredicted RBP1.35□□□□□ -2.19
RTT107YHR154W YDR029WQ12111 104 aa1.35□□□□□ -2.19
RTT107YHR154W YDL241WQ07738 123 aa1.34□□□□□ -2.19
RTT107YHR154W YLR042CQ07990 161 aa1.34□□□□□ -2.19
RTT107YHR154W YOR343CQ12484 108 aa1.34□□□□□ -2.19
RTT107YHR154W COX8P04039 78 aa1.34□□□□□ -2.19
RTT107YHR154W YOL162WP0CF19 215 aa1.34□□□□□ -2.19
RTT107YHR154W TMA19P35691 167 aaKnown RBP1.34□□□□□ -2.19
RTT107YHR154W QCR10P37299 77 aa1.34□□□□□ -2.19
RTT107YHR154W YGR269WP40326 108 aa1.34□□□□□ -2.19
RTT107YHR154W CYT2Q00873 224 aa1.34□□□□□ -2.19
RTT107YHR154W YMR103CQ04436 120 aa1.34□□□□□ -2.19
RTT107YHR154W KSH1Q8TGJ3 72 aa1.34□□□□□ -2.19
RTT107YHR154W UTR5P32630 166 aa1.34□□□□□ -2.2
RTT107YHR154W PAU15P40585 124 aa1.34□□□□□ -2.2
RTT107YHR154W BAT2P47176 376 aaKnown RBP1.34□□□□□ -2.2
RTT107YHR154W KNH1P50112 268 aa1.34□□□□□ -2.2
RTT107YHR154W THG1P53215 237 aaKnown RBP1.34□□□□□ -2.2
RTT107YHR154W FIT2Q08906 153 aa1.34□□□□□ -2.2
RTT107YHR154W YGL010WP25338 174 aa1.33□□□□□ -2.2
RTT107YHR154W SPI1P40092 148 aa1.33□□□□□ -2.2
RTT107YHR154W VMA21P41806 77 aa1.33□□□□□ -2.2
RTT107YHR154W YJL144WP47009 104 aa1.33□□□□□ -2.2
RTT107YHR154W BRP1P53194 125 aa1.33□□□□□ -2.2
RTT107YHR154W YIL014C-AQ02598 104 aa1.33□□□□□ -2.2
RTT107YHR154W YOL118CQ08259 102 aa1.33□□□□□ -2.2
RTT107YHR154W YKL065W-AQ2V2P2 73 aa1.33□□□□□ -2.2
RTT107YHR154W YOR381W-AQ3E804 55 aa1.33□□□□□ -2.2
RTT107YHR154W ECM12O13529 151 aa1.32□□□□□ -2.2
RTT107YHR154W RPL39P04650 51 aa1.32□□□□□ -2.2
RTT107YHR154W ROX3P25046 220 aa1.32□□□□□ -2.2
RTT107YHR154W EMP24P32803 203 aaKnown RBP1.32□□□□□ -2.2
RTT107YHR154W YAR029WP39549 74 aa1.32□□□□□ -2.2
RTT107YHR154W PAM16P42949 149 aa1.32□□□□□ -2.2
RTT107YHR154W RPL26AP05743 127 aaKnown RBP1.32□□□□□ -2.2
RTT107YHR154W RPS25BP0C0T4 108 aaKnown RBP1.32□□□□□ -2.2
RTT107YHR154W YKR045CP36138 183 aa1.32□□□□□ -2.2
RTT107YHR154W YAL064WP39711 94 aa1.32□□□□□ -2.2
RTT107YHR154W PEP8P40335 379 aa1.32□□□□□ -2.2
RTT107YHR154W RPL26BP53221 127 aaKnown RBP1.32□□□□□ -2.2
RTT107YHR154W POP3P53833 195 aaPredicted RBP1.32□□□□□ -2.2
RTT107YHR154W SCS22Q6Q595 175 aa1.32□□□□□ -2.2
RTT107YHR154W YHR212W-AP0CX91 67 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms