RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C MPC2P38857 129 aa2.47□□□□□ -2.01
RPN1YHR027C AIM19P40502 157 aa2.47□□□□□ -2.01
RPN1YHR027C PPT2Q12036 173 aa2.47□□□□□ -2.01
RPN1YHR027C RPL11BQ3E757 174 aaPredicted RBP2.47□□□□□ -2.01
RPN1YHR027C YDL009CQ12210 107 aa2.47□□□□□ -2.01
RPN1YHR027C HHF1P02309 103 aaKnown RBP2.46□□□□□ -2.01
RPN1YHR027C RPS14AP06367 137 aaKnown RBP2.46□□□□□ -2.01
RPN1YHR027C RTG1P32607 177 aa2.46□□□□□ -2.01
RPN1YHR027C MSA2P36157 363 aa2.46□□□□□ -2.01
RPN1YHR027C NCE101Q02820 53 aa2.46□□□□□ -2.01
RPN1YHR027C YLR194CQ05777 254 aa2.46□□□□□ -2.01
RPN1YHR027C YLR111WQ12528 110 aa2.46□□□□□ -2.01
RPN1YHR027C YGL258W-AQ3E740 77 aa2.46□□□□□ -2.01
RPN1YHR027C HMRA2P0CY13 119 aa2.46□□□□□ -2.02
RPN1YHR027C SPS100P13130 326 aa2.46□□□□□ -2.02
RPN1YHR027C MXR2P25566 168 aa2.46□□□□□ -2.02
RPN1YHR027C LDB16P25587 256 aa2.46□□□□□ -2.02
RPN1YHR027C RPL16AP26784 199 aaKnown RBP2.46□□□□□ -2.02
RPN1YHR027C MTC6P38849 526 aa2.46□□□□□ -2.02
RPN1YHR027C PBA1Q05778 276 aa2.46□□□□□ -2.02
RPN1YHR027C YOR268CQ08734 132 aa2.46□□□□□ -2.02
RPN1YHR027C YHR214C-EQ8TGK0 99 aa2.46□□□□□ -2.02
RPN1YHR027C YHR214C-DP0CX93 97 aa2.46□□□□□ -2.02
RPN1YHR027C YBR209WP38311 105 aa2.46□□□□□ -2.02
RPN1YHR027C PEX17P40155 199 aa2.46□□□□□ -2.02
RPN1YHR027C MRPS12P53732 153 aa2.46□□□□□ -2.02
RPN1YHR027C ICY1Q04329 127 aa2.46□□□□□ -2.02
RPN1YHR027C PBP4Q07362 185 aaKnown RBP2.46□□□□□ -2.02
RPN1YHR027C RPL11AP0C0W9 174 aaKnown RBP2.45□□□□□ -2.02
RPN1YHR027C YMR141CP40211 102 aa2.45□□□□□ -2.02
RPN1YHR027C VHS2P40463 436 aa2.45□□□□□ -2.02
RPN1YHR027C ICS3P47034 131 aa2.45□□□□□ -2.02
RPN1YHR027C TOS6P48560 102 aa2.45□□□□□ -2.02
RPN1YHR027C YNL234WP53857 426 aa2.45□□□□□ -2.02
RPN1YHR027C YML122CQ03207 126 aa2.45□□□□□ -2.02
RPN1YHR027C YKR045CP36138 183 aa2.45□□□□□ -2.02
RPN1YHR027C AIM4P38305 123 aaPredicted RBP2.45□□□□□ -2.02
RPN1YHR027C YHR022CP38763 256 aa2.45□□□□□ -2.02
RPN1YHR027C YFR035CP43608 114 aa2.45□□□□□ -2.02
RPN1YHR027C SUT1P53032 299 aaKnown RBP2.45□□□□□ -2.02
RPN1YHR027C ERI1P62651 68 aaKnown RBP2.45□□□□□ -2.02
RPN1YHR027C YMR181CQ03231 154 aa2.45□□□□□ -2.02
RPN1YHR027C DCV1P43595 202 aa2.44□□□□□ -2.02
RPN1YHR027C KEG1P43614 200 aa2.44□□□□□ -2.02
RPN1YHR027C YGL034CP53186 121 aa2.44□□□□□ -2.02
RPN1YHR027C DAD4P69851 72 aa2.44□□□□□ -2.02
RPN1YHR027C NAG1Q8TGN9 163 aa2.44□□□□□ -2.02
RPN1YHR027C YAL065CO13511 128 aa2.44□□□□□ -2.02
RPN1YHR027C ARF2P19146 181 aaKnown RBP2.44□□□□□ -2.02
RPN1YHR027C RPB9P27999 122 aa2.44□□□□□ -2.02
RPN1YHR027C MED6P38782 295 aa2.44□□□□□ -2.02
RPN1YHR027C YDR274CP87283 123 aa2.44□□□□□ -2.02
RPN1YHR027C YGR121W-AQ3E816 71 aa2.44□□□□□ -2.02
RPN1YHR027C DIF1O13577 133 aa2.43□□□□□ -2.02
RPN1YHR027C YGR018CP53211 109 aa2.43□□□□□ -2.02
RPN1YHR027C FHN1P53279 174 aa2.43□□□□□ -2.02
RPN1YHR027C ATP23P53722 227 aa2.43□□□□□ -2.02
RPN1YHR027C YLR162WQ06235 118 aa2.43□□□□□ -2.02
RPN1YHR027C PRM7Q12459 698 aa2.43□□□□□ -2.02
RPN1YHR027C YOR376W-AQ3E805 51 aa2.43□□□□□ -2.02
RPN1YHR027C GLO1P50107 326 aa2.43□□□□□ -2.02
RPN1YHR027C YNL190WP53872 204 aa2.43□□□□□ -2.02
RPN1YHR027C RPL15BP54780 204 aaPredicted RBP2.43□□□□□ -2.02
RPN1YHR027C YCR022CP25620 114 aa2.43□□□□□ -2.02
RPN1YHR027C YEL045CP32616 141 aa2.43□□□□□ -2.02
RPN1YHR027C YMR254CQ04838 102 aa2.43□□□□□ -2.02
RPN1YHR027C YLR156WP0CE96 114 aa2.42□□□□□ -2.02
RPN1YHR027C YLR159WP0CE97 114 aa2.42□□□□□ -2.02
RPN1YHR027C YLR161WP0CE98 114 aa2.42□□□□□ -2.02
RPN1YHR027C RSM18P40033 138 aa2.42□□□□□ -2.02
RPN1YHR027C PCP1P53259 346 aa2.42□□□□□ -2.02
RPN1YHR027C VPS68Q12016 184 aa2.42□□□□□ -2.02
RPN1YHR027C ATP20Q12233 115 aa2.42□□□□□ -2.02
RPN1YHR027C RPS14BP39516 138 aaKnown RBP2.42□□□□□ -2.02
RPN1YHR027C EDC1P53080 175 aaPredicted RBP2.42□□□□□ -2.02
RPN1YHR027C IRC19Q07843 230 aa2.42□□□□□ -2.02
RPN1YHR027C SRL1Q08673 210 aa2.42□□□□□ -2.02
RPN1YHR027C YOR314WQ12506 109 aa2.42□□□□□ -2.02
RPN1YHR027C YLR285C-AQ3E771 56 aa2.42□□□□□ -2.02
RPN1YHR027C CCW14O13547 238 aa2.41□□□□□ -2.02
RPN1YHR027C RPL26AP05743 127 aaKnown RBP2.41□□□□□ -2.02
RPN1YHR027C SHU1P38751 150 aa2.41□□□□□ -2.02
RPN1YHR027C IMP2P46972 177 aa2.41□□□□□ -2.02
RPN1YHR027C YMR295CQ03559 197 aa2.41□□□□□ -2.02
RPN1YHR027C AIR2Q12476 344 aaKnown RBP2.41□□□□□ -2.02
RPN1YHR027C YLR342W-AQ3E810 57 aa2.41□□□□□ -2.02
RPN1YHR027C SAP30P38429 201 aa2.41□□□□□ -2.02
RPN1YHR027C YIL029CP40538 142 aa2.41□□□□□ -2.02
RPN1YHR027C EAF6P47128 113 aa2.41□□□□□ -2.02
RPN1YHR027C YGL193CP53097 103 aa2.41□□□□□ -2.02
RPN1YHR027C NCE102Q12207 173 aaRIP-Chip data2.41□□□□□ -2.02not detected
RPN1YHR027C YBR144CP34215 104 aa2.4□□□□□ -2.02
RPN1YHR027C YHL005CP38752 130 aa2.4□□□□□ -2.02
RPN1YHR027C HUR1P45820 110 aa2.4□□□□□ -2.02
RPN1YHR027C TOS8P53147 276 aa2.4□□□□□ -2.02
RPN1YHR027C TRS23Q03784 219 aa2.4□□□□□ -2.02
RPN1YHR027C RPC11Q04307 110 aaPredicted RBP2.4□□□□□ -2.02
RPN1YHR027C YOR381W-AQ3E804 55 aa2.4□□□□□ -2.02
RPN1YHR027C YFL015CP43578 164 aa2.4□□□□□ -2.03
RPN1YHR027C COX17Q12287 69 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms