RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YCH1P42937 148 aa2.92□□□□□ -1.94
SPT6YGR116W SHH4Q06236 168 aa2.92□□□□□ -1.94
SPT6YGR116W YCL021W-AQ96VH3 125 aa2.92□□□□□ -1.94
SPT6YGR116W SMP1P38128 452 aa2.92□□□□□ -1.94
SPT6YGR116W DCV1P43595 202 aa2.92□□□□□ -1.94
SPT6YGR116W HUR1P45820 110 aa2.92□□□□□ -1.94
SPT6YGR116W SEC16P48415 2195 aaKnown RBP2.92□□□□□ -1.94
SPT6YGR116W ADH5P38113 351 aaKnown RBP2.92□□□□□ -1.94
SPT6YGR116W MPC2P38857 129 aa2.92□□□□□ -1.94
SPT6YGR116W GLE2P40066 365 aa2.92□□□□□ -1.94
SPT6YGR116W YJL027CP47063 138 aaPredicted RBP2.92□□□□□ -1.94
SPT6YGR116W VPS55P47111 140 aa2.92□□□□□ -1.94
SPT6YGR116W IRC23Q08416 157 aa2.92□□□□□ -1.94
SPT6YGR116W QCR8P08525 94 aa2.91□□□□□ -1.94
SPT6YGR116W YBR121C-AP0C5L4 52 aa2.91□□□□□ -1.94
SPT6YGR116W MOH1P38191 138 aa2.91□□□□□ -1.94
SPT6YGR116W YER121WP40076 114 aa2.91□□□□□ -1.94
SPT6YGR116W YGR045CP53229 120 aa2.91□□□□□ -1.94
SPT6YGR116W RPL16BP26785 198 aaKnown RBP2.91□□□□□ -1.94
SPT6YGR116W SGN1P40561 250 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SPT6YGR116W YFL015CP43578 164 aa2.91□□□□□ -1.94
SPT6YGR116W YPL038W-AQ3E7B4 63 aa2.91□□□□□ -1.94
SPT6YGR116W ACC1Q00955 2233 aaKnown RBP2.91□□□□□ -1.94
SPT6YGR116W GLT1Q12680 2145 aaKnown RBP2.91□□□□□ -1.94
SPT6YGR116W BRR2P32639 2163 aaKnown RBP2.91□□□□□ -1.94
SPT6YGR116W FAB1P34756 2278 aa2.9□□□□□ -1.94
SPT6YGR116W YDL022C-AP0C5L6 82 aa2.9□□□□□ -1.94
SPT6YGR116W YNL046WP53956 172 aa2.9□□□□□ -1.94
SPT6YGR116W IES6P32617 166 aa2.9□□□□□ -1.95
SPT6YGR116W SHU1P38751 150 aa2.9□□□□□ -1.95
SPT6YGR116W SIM1P40472 476 aa2.9□□□□□ -1.95
SPT6YGR116W YOL160WQ08321 113 aa2.9□□□□□ -1.95
SPT6YGR116W YDR381C-AQ3E6R5 114 aa2.9□□□□□ -1.95
SPT6YGR116W TRP1P00912 224 aa2.9□□□□□ -1.95
SPT6YGR116W YKR045CP36138 183 aa2.9□□□□□ -1.95
SPT6YGR116W YSY6P38374 65 aa2.9□□□□□ -1.95
SPT6YGR116W SBH1P52870 82 aa2.9□□□□□ -1.95
SPT6YGR116W PRM7Q12459 698 aa2.9□□□□□ -1.95
SPT6YGR116W YJR146WP47174 117 aa2.89□□□□□ -1.95
SPT6YGR116W YOR029WQ12243 111 aa2.89□□□□□ -1.95
SPT6YGR116W YER039C-AP0CD97 72 aa2.89□□□□□ -1.95
SPT6YGR116W UBC5P15732 148 aa2.89□□□□□ -1.95
SPT6YGR116W YMR317WQ04893 1140 aa2.89□□□□□ -1.95
SPT6YGR116W GAT3Q07928 141 aa2.89□□□□□ -1.95
SPT6YGR116W PPT2Q12036 173 aa2.89□□□□□ -1.95
SPT6YGR116W KTI11Q3E840 82 aa2.89□□□□□ -1.95
SPT6YGR116W YNL190WP53872 204 aa2.88□□□□□ -1.95
SPT6YGR116W YPR053CQ6Q5F3 151 aa2.88□□□□□ -1.95
SPT6YGR116W BEM2P39960 2167 aaKnown RBP2.88□□□□□ -1.95
SPT6YGR116W RPL2AP0CX45 254 aaKnown RBP2.88□□□□□ -1.95
SPT6YGR116W RPL2BP0CX46 254 aaKnown RBP2.88□□□□□ -1.95
SPT6YGR116W NCE103P53615 221 aa2.88□□□□□ -1.95
SPT6YGR116W MRPS12P53732 153 aa2.88□□□□□ -1.95
SPT6YGR116W YBR200W-AQ3E755 54 aa2.88□□□□□ -1.95
SPT6YGR116W YOR020W-AQ3E824 90 aa2.88□□□□□ -1.95
SPT6YGR116W SED1Q01589 338 aa2.87□□□□□ -1.95
SPT6YGR116W PBP4Q07362 185 aaKnown RBP2.87□□□□□ -1.95
SPT6YGR116W YLR042CQ07990 161 aa2.87□□□□□ -1.95
SPT6YGR116W RPL15AP05748 204 aaKnown RBP2.87□□□□□ -1.95
SPT6YGR116W YCR050CP25630 102 aa2.87□□□□□ -1.95
SPT6YGR116W RPL16AP26784 199 aaKnown RBP2.87□□□□□ -1.95
SPT6YGR116W YHR022CP38763 256 aa2.87□□□□□ -1.95
SPT6YGR116W CTR2P38865 189 aa2.87□□□□□ -1.95
SPT6YGR116W MSA2P36157 363 aa2.87□□□□□ -1.95
SPT6YGR116W UTH1P36135 365 aa2.86□□□□□ -1.95
SPT6YGR116W YBR209WP38311 105 aa2.86□□□□□ -1.95
SPT6YGR116W YHL018WP38744 120 aaPredicted RBP2.86□□□□□ -1.95
SPT6YGR116W NRM1P53718 249 aa2.86□□□□□ -1.95
SPT6YGR116W CCW12Q12127 133 aa2.86□□□□□ -1.95
SPT6YGR116W SVP26P38869 228 aa2.86□□□□□ -1.95
SPT6YGR116W RRT13P40042 185 aa2.86□□□□□ -1.95
SPT6YGR116W BNA1P47096 177 aa2.86□□□□□ -1.95
SPT6YGR116W RPS28BP0C0X0 67 aaKnown RBP2.86□□□□□ -1.95
SPT6YGR116W YNL234WP53857 426 aa2.86□□□□□ -1.95
SPT6YGR116W RPS28AQ3E7X9 67 aaPredicted RBP2.86□□□□□ -1.95
SPT6YGR116W YAR029WP39549 74 aa2.85□□□□□ -1.95
SPT6YGR116W DAP1Q12091 152 aa2.85□□□□□ -1.95
SPT6YGR116W SEN1Q00416 2231 aaKnown RBP2.85□□□□□ -1.95
SPT6YGR116W SUT1P53032 299 aaKnown RBP2.85□□□□□ -1.95
SPT6YGR116W RGM1Q00453 211 aa2.85□□□□□ -1.95
SPT6YGR116W COX17Q12287 69 aa2.85□□□□□ -1.95
SPT6YGR116W PMP3P87284 55 aa2.84□□□□□ -1.95
SPT6YGR116W BET1P22804 142 aa2.84□□□□□ -1.95
SPT6YGR116W YRA2P36036 203 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SPT6YGR116W YJR107C-AP0CT86 78 aa2.84□□□□□ -1.96
SPT6YGR116W YEL008WP40001 126 aa2.84□□□□□ -1.96
SPT6YGR116W IRC21Q04772 201 aa2.84□□□□□ -1.96
SPT6YGR116W YCL048W-AQ2V2Q2 79 aa2.84□□□□□ -1.96
SPT6YGR116W YLR285C-AQ3E771 56 aa2.84□□□□□ -1.96
SPT6YGR116W YNL146C-AQ3E7Z1 64 aa2.84□□□□□ -1.96
SPT6YGR116W YER187WP40102 141 aa2.84□□□□□ -1.96
SPT6YGR116W ARC15P40518 154 aaRIP-Chip data2.84□□□□□ -1.96not detected
SPT6YGR116W TSC3Q3E790 80 aa2.83□□□□□ -1.96
SPT6YGR116W YHL037CP38733 133 aa2.83□□□□□ -1.96
SPT6YGR116W YGL088WP53151 121 aa2.83□□□□□ -1.96
SPT6YGR116W YKL183C-AQ3E765 70 aa2.83□□□□□ -1.96
SPT6YGR116W YOL085CQ99345 113 aa2.83□□□□□ -1.96
SPT6YGR116W AIM4P38305 123 aaPredicted RBP2.83□□□□□ -1.96
SPT6YGR116W YNL194CP40169 301 aa2.83□□□□□ -1.96
SPT6YGR116W YOR011W-AQ3E807 68 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms