RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	TIM9	O74700	87 aa		4.24	□□□□□ -1.73
VAM7	YGL212W	RPB9	P27999	122 aa		4.24	□□□□□ -1.73
VAM7	YGL212W	QCR10	P37299	77 aa		4.24	□□□□□ -1.73
VAM7	YGL212W	YHP1	Q04116	353 aa		4.24	□□□□□ -1.73
VAM7	YGL212W	RRT1	P38192	103 aa		4.23	□□□□□ -1.73
VAM7	YGL212W	SRL1	Q08673	210 aa		4.23	□□□□□ -1.73
VAM7	YGL212W	YIL102C-A	Q2V2P5	75 aa		4.23	□□□□□ -1.73
VAM7	YGL212W	YFL041W-A	Q3E817	63 aa		4.23	□□□□□ -1.73
VAM7	YGL212W	YCR022C	P25620	114 aa		4.22	□□□□□ -1.73
VAM7	YGL212W	MRP17	P28778	131 aa		4.22	□□□□□ -1.73
VAM7	YGL212W	ASP1	P38986	381 aa	Predicted RBP	4.22	□□□□□ -1.73
VAM7	YGL212W	YER187W	P40102	141 aa		4.22	□□□□□ -1.73
VAM7	YGL212W	YNL208W	P40159	199 aa	Known RBP	4.22	□□□□□ -1.73
VAM7	YGL212W	NCA3	P46955	337 aa		4.22	□□□□□ -1.73
VAM7	YGL212W	YOR015W	Q12169	119 aa		4.22	□□□□□ -1.73
VAM7	YGL212W	YPL247C	Q12523	523 aa		4.22	□□□□□ -1.73
VAM7	YGL212W	YCL021W-A	Q96VH3	125 aa		4.22	□□□□□ -1.73
VAM7	YGL212W	MDM35	O60200	86 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	YCR043C	P25361	127 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	NHP2	P32495	156 aa	Predicted RBP	4.21	□□□□□ -1.74
VAM7	YGL212W	RPB7	P34087	171 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	RSM18	P40033	138 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	YDR274C	P87283	123 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	YML079W	Q03629	201 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	SOM1	Q05676	74 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	YLR111W	Q12528	110 aa		4.21	□□□□□ -1.74
VAM7	YGL212W	YHR213W	P0CI67	198 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	CTR2	P38865	189 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	RRT13	P40042	185 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	PAU15	P40585	124 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	MIC27	P50945	234 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	MRPS16	Q02608	121 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	YML122C	Q03207	126 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	YDL157C	Q12082	118 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	YOR381W-A	Q3E804	55 aa		4.2	□□□□□ -1.74
VAM7	YGL212W	PAU2	P32612	120 aa		4.19	□□□□□ -1.74
VAM7	YGL212W	GCV3	P39726	170 aa	Predicted RBP	4.19	□□□□□ -1.74
VAM7	YGL212W	YIL086C	P40503	102 aa		4.19	□□□□□ -1.74
VAM7	YGL212W	TVP15	Q03860	143 aa		4.19	□□□□□ -1.74
VAM7	YGL212W	ICY1	Q04329	127 aa		4.19	□□□□□ -1.74
VAM7	YGL212W	YDR381C-A	Q3E6R5	114 aa		4.19	□□□□□ -1.74
VAM7	YGL212W	FZF1	P32805	299 aa		4.18	□□□□□ -1.74
VAM7	YGL212W	YHL005C	P38752	130 aa		4.18	□□□□□ -1.74
VAM7	YGL212W	YJR085C	P47131	105 aa	Known RBP	4.18	□□□□□ -1.74
VAM7	YGL212W	MPC3	P53311	146 aa		4.18	□□□□□ -1.74
VAM7	YGL212W	YPL261C	Q08976	102 aa		4.18	□□□□□ -1.74
VAM7	YGL212W	RPL21B	Q12672	160 aa	Known RBP	4.17	□□□□□ -1.74
VAM7	YGL212W	YPL038W-A	Q3E7B4	63 aa		4.17	□□□□□ -1.74
VAM7	YGL212W	MHF2	Q3E829	80 aa		4.17	□□□□□ -1.74
VAM7	YGL212W	PAU19	P0CE85	124 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	PAU3	P25610	124 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	HSP10	P38910	106 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	ICS3	P47034	131 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	BNS1	P50084	137 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	BOL2	P53082	120 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	PAU12	P53343	120 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	RPL22B	P56628	122 aa	Known RBP	4.16	□□□□□ -1.74
VAM7	YGL212W	PBA1	Q05778	276 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	ATG41	Q12048	136 aa		4.16	□□□□□ -1.74
VAM7	YGL212W	PDX3	P38075	228 aa	Known RBP	4.15	□□□□□ -1.75
VAM7	YGL212W	MET31	Q03081	177 aa		4.15	□□□□□ -1.75
VAM7	YGL212W	YOL029C	Q08187	201 aa		4.15	□□□□□ -1.75
VAM7	YGL212W	YOR105W	Q08504	108 aa		4.15	□□□□□ -1.75
VAM7	YGL212W	MRPS9	P38120	278 aa		4.14	□□□□□ -1.75
VAM7	YGL212W	YHR125W	P38831	101 aa		4.14	□□□□□ -1.75
VAM7	YGL212W	YGL118C	P53132	145 aa		4.14	□□□□□ -1.75
VAM7	YGL212W	CRH1	P53301	507 aa		4.14	□□□□□ -1.75
VAM7	YGL212W	RPL21A	Q02753	160 aa	Known RBP	4.14	□□□□□ -1.75
VAM7	YGL212W	YMR244W	Q04018	355 aa		4.14	□□□□□ -1.75
VAM7	YGL212W	IRC19	Q07843	230 aa		4.14	□□□□□ -1.75
VAM7	YGL212W	YLR122C	Q12312	125 aa		4.14	□□□□□ -1.75
VAM7	YGL212W	CDC39	P25655	2108 aa	Known RBP	4.13	□□□□□ -1.75
VAM7	YGL212W	PAU16	P35994	123 aa		4.13	□□□□□ -1.75
VAM7	YGL212W	PAU24	P38155	120 aa		4.13	□□□□□ -1.75
VAM7	YGL212W	YIL054W	P40524	105 aa		4.13	□□□□□ -1.75
VAM7	YGL212W	ECO1	P43605	281 aa		4.13	□□□□□ -1.75
VAM7	YGL212W	COX12	Q01519	83 aa		4.13	□□□□□ -1.75
VAM7	YGL212W	TMC1	Q08422	150 aa	Predicted RBP	4.13	□□□□□ -1.75
VAM7	YGL212W	OST5	Q92316	86 aa		4.13	□□□□□ -1.75
VAM7	YGL212W	API2	Q04413	109 aa		4.12	□□□□□ -1.75
VAM7	YGL212W	YOR268C	Q08734	132 aa		4.12	□□□□□ -1.75
VAM7	YGL212W	UBR1	P19812	1950 aa		4.12	□□□□□ -1.75
VAM7	YGL212W	RPL26A	P05743	127 aa	Known RBP	4.11	□□□□□ -1.75
VAM7	YGL212W	PTH1	P38876	190 aa	Known RBP	4.11	□□□□□ -1.75
VAM7	YGL212W	LSM6	Q06406	86 aa	Known RBP	4.11	□□□□□ -1.75
VAM7	YGL212W	HPA2	Q06592	156 aa		4.11	□□□□□ -1.75
VAM7	YGL212W	YOL118C	Q08259	102 aa		4.11	□□□□□ -1.75
VAM7	YGL212W	CRC1	Q12289	327 aa		4.11	□□□□□ -1.75
VAM7	YGL212W	CYR1	P08678	2026 aa	Known RBP	4.11	□□□□□ -1.75
VAM7	YGL212W	YHR214C-D	P0CX93	97 aa		4.1	□□□□□ -1.75
VAM7	YGL212W	SDH3	P33421	198 aa		4.1	□□□□□ -1.75
VAM7	YGL212W	IMP2	P46972	177 aa		4.1	□□□□□ -1.75
VAM7	YGL212W	YGL149W	P53116	101 aa		4.1	□□□□□ -1.75
VAM7	YGL212W	YDR115W	Q04598	105 aa		4.1	□□□□□ -1.75
VAM7	YGL212W	ASK1	P35734	292 aa		4.09	□□□□□ -1.75
VAM7	YGL212W	YFL067W	P43537	175 aa		4.09	□□□□□ -1.75
VAM7	YGL212W	YMR254C	Q04838	102 aa		4.09	□□□□□ -1.75
VAM7	YGL212W	AYT1	Q12226	474 aa		4.09	□□□□□ -1.75
VAM7	YGL212W	Q0297	Q9ZZV8	51 aa		4.09	□□□□□ -1.75
VAM7	YGL212W	BLM10	P43583	2143 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms