RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C HRT1Q08273 121 aa0.69□□□□□ -2.3
SEC3YER008C YJL197C-AP0C5P0 93 aa0.69□□□□□ -2.3
SEC3YER008C PAU21P0CE86 164 aa0.69□□□□□ -2.3
SEC3YER008C PAU22P0CE87 164 aa0.69□□□□□ -2.3
SEC3YER008C PAU2P32612 120 aa0.69□□□□□ -2.3
SEC3YER008C SCP1Q08873 200 aa0.69□□□□□ -2.3
SEC3YER008C RTR2Q12378 196 aa0.69□□□□□ -2.3
SEC3YER008C PAU24P38155 120 aa0.69□□□□□ -2.3
SEC3YER008C YBR219CP38317 127 aa0.69□□□□□ -2.3
SEC3YER008C FYV7Q12247 151 aa0.69□□□□□ -2.3
SEC3YER008C ATP14Q12349 124 aa0.69□□□□□ -2.3
SEC3YER008C TOR1P35169 2470 aa0.69□□□□□ -2.3
SEC3YER008C YGL041W-AP0C5N3 154 aa0.68□□□□□ -2.3
SEC3YER008C YCR099CP25657 155 aa0.68□□□□□ -2.3
SEC3YER008C YHR130CP38834 111 aa0.68□□□□□ -2.3
SEC3YER008C YER187WP40102 141 aa0.68□□□□□ -2.3
SEC3YER008C RPL13AQ12690 199 aaPredicted RBP0.68□□□□□ -2.3
SEC3YER008C MED11Q99278 115 aa0.68□□□□□ -2.3
SEC3YER008C GNA1P43577 159 aaPredicted RBP0.68□□□□□ -2.3
SEC3YER008C CUE4Q04201 117 aaPredicted RBP0.68□□□□□ -2.3
SEC3YER008C YGL194C-AQ2V2P6 80 aa0.68□□□□□ -2.3
SEC3YER008C KTI11Q3E840 82 aa0.68□□□□□ -2.3
SEC3YER008C YCL001W-BQ96VH2 84 aa0.68□□□□□ -2.3
SEC3YER008C SEC59P20048 519 aa0.68□□□□□ -2.3
SEC3YER008C CWC27Q02770 301 aa0.68□□□□□ -2.3
SEC3YER008C GPI19Q04082 140 aa0.68□□□□□ -2.3
SEC3YER008C RPC19P28000 142 aaKnown RBP0.67□□□□□ -2.3
SEC3YER008C HPA3P39979 161 aa0.67□□□□□ -2.3
SEC3YER008C PEP8P40335 379 aa0.67□□□□□ -2.3
SEC3YER008C YAE1P47118 141 aaPredicted RBP0.67□□□□□ -2.3
SEC3YER008C YLR296WQ05898 108 aa0.67□□□□□ -2.3
SEC3YER008C NMA1Q06178 401 aaKnown RBP0.67□□□□□ -2.3
SEC3YER008C RAF1Q06891 181 aa0.67□□□□□ -2.3
SEC3YER008C YLR365WQ7LIF2 110 aa0.67□□□□□ -2.3
SEC3YER008C YBR027CP38220 110 aa0.67□□□□□ -2.3
SEC3YER008C AIM4P38305 123 aaPredicted RBP0.67□□□□□ -2.3
SEC3YER008C SNF11P38956 169 aa0.67□□□□□ -2.3
SEC3YER008C SPG1P50088 95 aa0.67□□□□□ -2.3
SEC3YER008C RPL22BP56628 122 aaKnown RBP0.67□□□□□ -2.3
SEC3YER008C RGM1Q00453 211 aa0.67□□□□□ -2.3
SEC3YER008C YIL014C-AQ02598 104 aa0.67□□□□□ -2.3
SEC3YER008C YPL225WQ08971 146 aaKnown RBP0.67□□□□□ -2.3
SEC3YER008C QCR8P08525 94 aa0.67□□□□□ -2.3
SEC3YER008C MET31Q03081 177 aa0.67□□□□□ -2.3
SEC3YER008C YMR082CQ04276 118 aa0.67□□□□□ -2.3
SEC3YER008C YKL068W-AQ3E826 78 aa0.67□□□□□ -2.3
SEC3YER008C TAR1Q8TGM6 124 aa0.67□□□□□ -2.3
SEC3YER008C ECM31P38122 312 aa0.67□□□□□ -2.3
SEC3YER008C YML079WQ03629 201 aa0.67□□□□□ -2.3
SEC3YER008C LSM8P47093 109 aaKnown RBP0.66□□□□□ -2.3
SEC3YER008C DAD4P69851 72 aa0.66□□□□□ -2.3
SEC3YER008C SWC7Q06707 132 aa0.66□□□□□ -2.3
SEC3YER008C POL2P21951 2222 aaKnown RBP0.66□□□□□ -2.3
SEC3YER008C YBR209WP38311 105 aa0.66□□□□□ -2.3
SEC3YER008C YKL018C-AQ3E7A7 99 aa0.66□□□□□ -2.3
SEC3YER008C HFA1P32874 2273 aa0.66□□□□□ -2.3
SEC3YER008C FUN14P18411 198 aa0.66□□□□□ -2.3
SEC3YER008C ANB1P19211 157 aa0.66□□□□□ -2.3
SEC3YER008C HYP2P23301 157 aaKnown RBP0.66□□□□□ -2.3
SEC3YER008C GPI11Q06636 219 aa0.66□□□□□ -2.3
SEC3YER008C Q0297Q9ZZV8 51 aa0.66□□□□□ -2.3
SEC3YER008C RPB7P34087 171 aa0.65□□□□□ -2.3
SEC3YER008C TMA19P35691 167 aaKnown RBP0.65□□□□□ -2.3
SEC3YER008C COX23P38824 151 aa0.65□□□□□ -2.3
SEC3YER008C FCF2Q12035 217 aaPredicted RBP0.65□□□□□ -2.3
SEC3YER008C YGL014C-AP0C5N1 53 aa0.65□□□□□ -2.31
SEC3YER008C YHR213WP0CI67 198 aa0.65□□□□□ -2.31
SEC3YER008C ERV14P53173 138 aa0.65□□□□□ -2.31
SEC3YER008C YLR162WQ06235 118 aa0.65□□□□□ -2.31
SEC3YER008C MRPL15P36523 253 aa0.65□□□□□ -2.31
SEC3YER008C DSE2P38844 325 aa0.64□□□□□ -2.31
SEC3YER008C MRPS12P53732 153 aa0.64□□□□□ -2.31
SEC3YER008C YLR194CQ05777 254 aa0.64□□□□□ -2.31
SEC3YER008C EMC6Q12431 108 aa0.64□□□□□ -2.31
SEC3YER008C YMR175W-AQ3E766 64 aa0.64□□□□□ -2.31
SEC3YER008C YLR255CO13574 117 aa0.64□□□□□ -2.31
SEC3YER008C RPS27AP35997 82 aaKnown RBP0.64□□□□□ -2.31
SEC3YER008C RPS27BP38711 82 aa0.64□□□□□ -2.31
SEC3YER008C YPL067CQ02754 198 aa0.64□□□□□ -2.31
SEC3YER008C YDR210WQ03482 75 aa0.64□□□□□ -2.31
SEC3YER008C SEN15Q04675 128 aa0.64□□□□□ -2.31
SEC3YER008C VAM10Q08474 114 aa0.64□□□□□ -2.31
SEC3YER008C PRM3Q08931 133 aa0.64□□□□□ -2.31
SEC3YER008C YPL261CQ08976 102 aa0.64□□□□□ -2.31
SEC3YER008C YOR032W-AQ8TGS1 66 aa0.64□□□□□ -2.31
SEC3YER008C OST5Q92316 86 aa0.64□□□□□ -2.31
SEC3YER008C TAO3P40468 2376 aa0.64□□□□□ -2.31
SEC3YER008C LST8P41318 303 aa0.64□□□□□ -2.31
SEC3YER008C RSM19P53733 91 aaPredicted RBP0.64□□□□□ -2.31
SEC3YER008C SED1Q01589 338 aa0.64□□□□□ -2.31
SEC3YER008C AQY2P0CD90 149 aa0.63□□□□□ -2.31
SEC3YER008C YHR212W-AP0CX91 67 aa0.63□□□□□ -2.31
SEC3YER008C NRG2P38082 220 aa0.63□□□□□ -2.31
SEC3YER008C YHR007C-AQ07074 71 aa0.63□□□□□ -2.31
SEC3YER008C YOS1Q3E834 85 aa0.63□□□□□ -2.31
SEC3YER008C PRP8P33334 2413 aaKnown RBP0.63□□□□□ -2.31
SEC3YER008C RPS25BP0C0T4 108 aaKnown RBP0.63□□□□□ -2.31
SEC3YER008C HUR1P45820 110 aa0.63□□□□□ -2.31
SEC3YER008C RPS25AQ3E792 108 aaPredicted RBP0.63□□□□□ -2.31
SEC3YER008C SEC16P48415 2195 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms