RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C YLR307C-AQ3E825 87 aa1.22□□□□□ -2.21
LSM6YDR378C MED11Q99278 115 aa1.22□□□□□ -2.21
LSM6YDR378C GSP1P32835 219 aaKnown RBP1.21□□□□□ -2.22
LSM6YDR378C YDR278CQ05612 105 aa1.21□□□□□ -2.22
LSM6YDR378C GSC2P40989 1895 aa1.2□□□□□ -2.22
LSM6YDR378C YBR056W-AI2HB52 66 aa1.2□□□□□ -2.22
LSM6YDR378C YOR034C-AQ3E735 80 aa1.2□□□□□ -2.22
LSM6YDR378C URB1P34241 1764 aaKnown RBP1.19□□□□□ -2.22
LSM6YDR378C IRA2P19158 3079 aa1.19□□□□□ -2.22
LSM6YDR378C SUA7P29055 345 aaPredicted RBP1.19□□□□□ -2.22
LSM6YDR378C LAA1P39526 2014 aa1.19□□□□□ -2.22
LSM6YDR378C YMR321CQ04898 105 aa1.19□□□□□ -2.22
LSM6YDR378C TAO3P40468 2376 aa1.19□□□□□ -2.22
LSM6YDR378C RRP5Q05022 1729 aaKnown RBP1.18□□□□□ -2.22
LSM6YDR378C RPL36BO14455 100 aaKnown RBP1.18□□□□□ -2.22
LSM6YDR378C RPL36AP05745 100 aaPredicted RBP1.18□□□□□ -2.22
LSM6YDR378C RPS20P38701 121 aaKnown RBP1.18□□□□□ -2.22
LSM6YDR378C YGL204CP53089 101 aa1.18□□□□□ -2.22
LSM6YDR378C FMP27Q06179 2628 aa1.18□□□□□ -2.22
LSM6YDR378C YLR157W-EP0CF00 54 aa1.17□□□□□ -2.22
LSM6YDR378C GCN1P33892 2672 aaKnown RBP1.16□□□□□ -2.22
LSM6YDR378C SNF2P22082 1703 aa1.16□□□□□ -2.22
LSM6YDR378C TRS20P38334 175 aa1.16□□□□□ -2.22
LSM6YDR378C Q0144Q9ZZW2 109 aa1.16□□□□□ -2.22
LSM6YDR378C MRPL31P14063 131 aaPredicted RBP1.15□□□□□ -2.23
LSM6YDR378C YGR042WP53227 271 aa1.15□□□□□ -2.23
LSM6YDR378C FCF2Q12035 217 aaPredicted RBP1.15□□□□□ -2.23
LSM6YDR378C FAS2P19097 1887 aaKnown RBP1.14□□□□□ -2.23
LSM6YDR378C FKS3Q04952 1785 aa1.14□□□□□ -2.23
LSM6YDR378C RPO41P13433 1351 aaKnown RBP1.14□□□□□ -2.23
LSM6YDR378C YLR361C-AQ3E795 98 aa1.14□□□□□ -2.23
LSM6YDR378C TOR2P32600 2474 aaKnown RBP1.14□□□□□ -2.23
LSM6YDR378C TRA1P38811 3744 aa1.14□□□□□ -2.23
LSM6YDR378C YRF1-3P0CX14 1859 aa1.14□□□□□ -2.23
LSM6YDR378C YRF1-7P0CX15 1859 aa1.14□□□□□ -2.23
LSM6YDR378C YRF1-6P53819 1859 aa1.14□□□□□ -2.23
LSM6YDR378C TY4B-JP47024 1803 aa1.13□□□□□ -2.23
LSM6YDR378C HYM1P32464 399 aa1.13□□□□□ -2.23
LSM6YDR378C CNL1Q06333 122 aa1.13□□□□□ -2.23
LSM6YDR378C MDN1Q12019 4910 aaKnown RBP1.12□□□□□ -2.23
LSM6YDR378C SFT1P43682 97 aa1.12□□□□□ -2.23
LSM6YDR378C YDR524C-BQ3E6R4 66 aa1.12□□□□□ -2.23
LSM6YDR378C CSF1Q12150 2958 aa1.11□□□□□ -2.23
LSM6YDR378C ERV14P53173 138 aa1.11□□□□□ -2.23
LSM6YDR378C YLR194CQ05777 254 aa1.11□□□□□ -2.23
LSM6YDR378C RIM15P43565 1770 aa1.11□□□□□ -2.23
LSM6YDR378C URA2P07259 2214 aaKnown RBP1.11□□□□□ -2.23
LSM6YDR378C NUP192P47054 1683 aa1.1□□□□□ -2.23
LSM6YDR378C YIL163CP40448 117 aa1.1□□□□□ -2.23
LSM6YDR378C PMD1P32634 1753 aa1.1□□□□□ -2.23
LSM6YDR378C FIG2P25653 1609 aa1.09□□□□□ -2.23
LSM6YDR378C SEC59P20048 519 aa1.09□□□□□ -2.23
LSM6YDR378C TIM8P57744 87 aa1.09□□□□□ -2.23
LSM6YDR378C HPA2Q06592 156 aa1.09□□□□□ -2.23
LSM6YDR378C LYS2P07702 1392 aa1.08□□□□□ -2.24
LSM6YDR378C GAT4P40569 121 aa1.08□□□□□ -2.24
LSM6YDR378C APC1P53886 1748 aa1.08□□□□□ -2.24
LSM6YDR378C EMP24P32803 203 aaKnown RBP1.07□□□□□ -2.24
LSM6YDR378C YLR419WQ06698 1435 aaKnown RBP1.06□□□□□ -2.24
LSM6YDR378C DYN1P36022 4092 aa1.06□□□□□ -2.24
LSM6YDR378C TY4B-HP0C2J7 1802 aa1.06□□□□□ -2.24
LSM6YDR378C SPC2Q04969 178 aa1.06□□□□□ -2.24
LSM6YDR378C SRX1P36077 127 aa1.05□□□□□ -2.24
LSM6YDR378C POR2P40478 281 aa1.05□□□□□ -2.24
LSM6YDR378C NKP2Q06162 153 aa1.05□□□□□ -2.24
LSM6YDR378C UTP20P35194 2493 aaKnown RBP1.05□□□□□ -2.24
LSM6YDR378C FLO1P32768 1537 aa1.05□□□□□ -2.24
LSM6YDR378C ICS3P47034 131 aa1.04□□□□□ -2.24
LSM6YDR378C SEN1Q00416 2231 aaKnown RBP1.04□□□□□ -2.24
LSM6YDR378C YJR128WP47162 119 aa1.03□□□□□ -2.24
LSM6YDR378C SAE3P89114 91 aa1.03□□□□□ -2.24
LSM6YDR378C YKL044WP36092 106 aa1.02□□□□□ -2.25
LSM6YDR378C POP7P38291 140 aa1.02□□□□□ -2.25
LSM6YDR378C DYN2Q02647 92 aa1.02□□□□□ -2.25
LSM6YDR378C SEC16P48415 2195 aaKnown RBP1□□□□□ -2.25
LSM6YDR378C RPL22AP05749 121 aaKnown RBP1□□□□□ -2.25
LSM6YDR378C YJL197C-AP0C5P0 93 aa1□□□□□ -2.25
LSM6YDR378C OCA6Q12454 224 aa1□□□□□ -2.25
LSM6YDR378C ENV10Q99382 181 aa1□□□□□ -2.25
LSM6YDR378C GPI19Q04082 140 aa0.99□□□□□ -2.25
LSM6YDR378C YGR240C-AQ3E786 66 aa0.98□□□□□ -2.25
LSM6YDR378C YIL014C-AQ02598 104 aa0.96□□□□□ -2.26
LSM6YDR378C YGL041C-BQ3E750 60 aa0.96□□□□□ -2.26
LSM6YDR378C SLO1Q3E784 85 aa0.96□□□□□ -2.26
LSM6YDR378C YOR376W-AQ3E805 51 aa0.96□□□□□ -2.26
LSM6YDR378C RAD50P12753 1312 aa0.95□□□□□ -2.26
LSM6YDR378C MRP49P32388 137 aa0.95□□□□□ -2.26
LSM6YDR378C ACP1P32463 125 aa0.95□□□□□ -2.26
LSM6YDR378C SNF11P38956 169 aa0.95□□□□□ -2.26
LSM6YDR378C UTP10P42945 1769 aaKnown RBP0.95□□□□□ -2.26
LSM6YDR378C YIL046W-AQ3E7Z4 54 aa0.94□□□□□ -2.26
LSM6YDR378C HKR1P41809 1802 aa0.93□□□□□ -2.26
LSM6YDR378C LCL1Q02786 101 aa0.92□□□□□ -2.26
LSM6YDR378C ARL3Q02804 198 aa0.92□□□□□ -2.26
LSM6YDR378C AIM11P87275 137 aa0.91□□□□□ -2.26
LSM6YDR378C BLM10P43583 2143 aa0.9□□□□□ -2.27
LSM6YDR378C YFR035CP43608 114 aa0.9□□□□□ -2.27
LSM6YDR378C OST5Q92316 86 aa0.9□□□□□ -2.27
LSM6YDR378C ECM29P38737 1868 aa0.89□□□□□ -2.27
LSM6YDR378C VMA7P39111 118 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms