RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C YBR209WP38311 105 aa2.24□□□□□ -2.05
TRM1YDR120C YBR219CP38317 127 aa2.24□□□□□ -2.05
TRM1YDR120C YNL200CP40165 246 aaKnown RBP2.24□□□□□ -2.05
TRM1YDR120C GLC8P41818 229 aa2.24□□□□□ -2.05
TRM1YDR120C JAC1P53193 184 aa2.24□□□□□ -2.05
TRM1YDR120C POP3P53833 195 aaPredicted RBP2.24□□□□□ -2.05
TRM1YDR120C RPS25AQ3E792 108 aaPredicted RBP2.24□□□□□ -2.05
TRM1YDR120C ANB1P19211 157 aa2.23□□□□□ -2.05
TRM1YDR120C PRE1P22141 198 aaKnown RBP2.23□□□□□ -2.05
TRM1YDR120C YEA4P40004 342 aa2.23□□□□□ -2.05
TRM1YDR120C NSE4P43124 402 aa2.23□□□□□ -2.05
TRM1YDR120C MIC27P50945 234 aa2.23□□□□□ -2.05
TRM1YDR120C CUE4Q04201 117 aaPredicted RBP2.23□□□□□ -2.05
TRM1YDR120C DGA1Q08650 418 aa2.23□□□□□ -2.05
TRM1YDR120C VMA9Q3E7B6 73 aa2.23□□□□□ -2.05
TRM1YDR120C YLR236CA0A023PZG4 107 aa2.22□□□□□ -2.05
TRM1YDR120C MPC3P53311 146 aa2.22□□□□□ -2.05
TRM1YDR120C YMR253CQ04835 414 aa2.22□□□□□ -2.05
TRM1YDR120C ANT1Q06497 328 aa2.22□□□□□ -2.05
TRM1YDR120C YPR145C-AQ2V2P0 78 aa2.22□□□□□ -2.05
TRM1YDR120C COA2Q3E823 68 aa2.22□□□□□ -2.05
TRM1YDR120C HAP3P13434 144 aa2.22□□□□□ -2.05
TRM1YDR120C FUN14P18411 198 aa2.22□□□□□ -2.05
TRM1YDR120C SHB17P36136 271 aaKnown RBP2.22□□□□□ -2.05
TRM1YDR120C GCV3P39726 170 aaPredicted RBP2.22□□□□□ -2.05
TRM1YDR120C YJR111CP47148 283 aaKnown RBP2.22□□□□□ -2.05
TRM1YDR120C SHH3Q04487 196 aa2.22□□□□□ -2.05
TRM1YDR120C YLR146W-AQ2V2P1 62 aa2.22□□□□□ -2.05
TRM1YDR120C POR1P04840 283 aaKnown RBP2.21□□□□□ -2.06
TRM1YDR120C EMP24P32803 203 aaKnown RBP2.21□□□□□ -2.06
TRM1YDR120C ATG8P38182 117 aaRIP-Chip data2.21□□□□□ -2.06not detected
TRM1YDR120C LSM2P38203 95 aaKnown RBP2.21□□□□□ -2.06
TRM1YDR120C AME1P38313 324 aa2.21□□□□□ -2.06
TRM1YDR120C SLM6P38343 150 aa2.21□□□□□ -2.06
TRM1YDR120C PAU15P40585 124 aa2.21□□□□□ -2.06
TRM1YDR120C KNH1P50112 268 aa2.21□□□□□ -2.06
TRM1YDR120C SNO1Q03144 224 aa2.21□□□□□ -2.06
TRM1YDR120C YLR162WQ06235 118 aa2.21□□□□□ -2.06
TRM1YDR120C RRT7Q07829 113 aa2.21□□□□□ -2.06
TRM1YDR120C LCL2Q08045 131 aa2.21□□□□□ -2.06
TRM1YDR120C CCW12Q12127 133 aa2.21□□□□□ -2.06
TRM1YDR120C SPC1P46965 94 aa2.2□□□□□ -2.06
TRM1YDR120C PKR1Q03880 122 aaKnown RBP2.2□□□□□ -2.06
TRM1YDR120C GIM5Q04493 163 aa2.2□□□□□ -2.06
TRM1YDR120C SPO13P23624 291 aa2.2□□□□□ -2.06
TRM1YDR120C DER1P38307 211 aa2.2□□□□□ -2.06
TRM1YDR120C TRS20P38334 175 aa2.2□□□□□ -2.06
TRM1YDR120C YEA6P39953 335 aa2.2□□□□□ -2.06
TRM1YDR120C YER134CP40081 178 aa2.2□□□□□ -2.06
TRM1YDR120C YGR269WP40326 108 aa2.2□□□□□ -2.06
TRM1YDR120C TOM7P53507 60 aa2.2□□□□□ -2.06
TRM1YDR120C YDR366CP87287 132 aa2.2□□□□□ -2.06
TRM1YDR120C TMA23Q03525 211 aa2.2□□□□□ -2.06
TRM1YDR120C YLR118CQ12354 227 aa2.2□□□□□ -2.06
TRM1YDR120C YGL194C-AQ2V2P6 80 aa2.2□□□□□ -2.06
TRM1YDR120C YAR023CD6VPM8 179 aa2.19□□□□□ -2.06
TRM1YDR120C PAU19P0CE85 124 aa2.19□□□□□ -2.06
TRM1YDR120C PAU21P0CE86 164 aa2.19□□□□□ -2.06
TRM1YDR120C PAU22P0CE87 164 aa2.19□□□□□ -2.06
TRM1YDR120C HSP12P22943 109 aaKnown RBP2.19□□□□□ -2.06
TRM1YDR120C PAU3P25610 124 aa2.19□□□□□ -2.06
TRM1YDR120C SEC72P39742 193 aaKnown RBP2.19□□□□□ -2.06
TRM1YDR120C YMR082CQ04276 118 aa2.19□□□□□ -2.06
TRM1YDR120C YOL014WQ08110 124 aa2.19□□□□□ -2.06
TRM1YDR120C YIR021W-AQ3E739 70 aa2.19□□□□□ -2.06
TRM1YDR120C YGR240C-AQ3E786 66 aa2.19□□□□□ -2.06
TRM1YDR120C YPR014CQ6B0W2 109 aa2.19□□□□□ -2.06
TRM1YDR120C QCR9P22289 66 aa2.18□□□□□ -2.06
TRM1YDR120C YBR013CP38215 129 aa2.18□□□□□ -2.06
TRM1YDR120C VMA21P41806 77 aa2.18□□□□□ -2.06
TRM1YDR120C ELC1Q03071 99 aa2.18□□□□□ -2.06
TRM1YDR120C YMR007WQ03675 126 aa2.18□□□□□ -2.06
TRM1YDR120C AVO2Q04749 426 aa2.18□□□□□ -2.06
TRM1YDR120C CNL1Q06333 122 aa2.18□□□□□ -2.06
TRM1YDR120C PAU23Q07987 124 aa2.18□□□□□ -2.06
TRM1YDR120C PAU17Q12370 124 aa2.18□□□□□ -2.06
TRM1YDR120C YML100W-AQ8TGT0 57 aa2.18□□□□□ -2.06
TRM1YDR120C YOR304C-AO14468 76 aa2.17□□□□□ -2.06
TRM1YDR120C UBI4P0CG63 381 aaKnown RBP2.17□□□□□ -2.06
TRM1YDR120C SEC11P15367 167 aa2.17□□□□□ -2.06
TRM1YDR120C MRPL11P36521 249 aaPredicted RBP2.17□□□□□ -2.06
TRM1YDR120C SPC25P40014 221 aa2.17□□□□□ -2.06
TRM1YDR120C FCF2Q12035 217 aaPredicted RBP2.17□□□□□ -2.06
TRM1YDR120C WIP1Q2V2P8 89 aa2.17□□□□□ -2.06
TRM1YDR120C SLO1Q3E784 85 aa2.17□□□□□ -2.06
TRM1YDR120C YNR034W-AQ3E841 98 aa2.17□□□□□ -2.06
TRM1YDR120C VAR1P02381 398 aa2.17□□□□□ -2.06
TRM1YDR120C TIR1P10863 254 aa2.17□□□□□ -2.06
TRM1YDR120C YGL010WP25338 174 aa2.17□□□□□ -2.06
TRM1YDR120C MRP49P32388 137 aa2.17□□□□□ -2.06
TRM1YDR120C YKR041WP36134 250 aa2.17□□□□□ -2.06
TRM1YDR120C NAT3Q06504 195 aa2.17□□□□□ -2.06
TRM1YDR120C FIT2Q08906 153 aa2.17□□□□□ -2.06
TRM1YDR120C RTC6O14464 93 aa2.16□□□□□ -2.06
TRM1YDR120C HSP10P38910 106 aa2.16□□□□□ -2.06
TRM1YDR120C EMC5P40540 141 aa2.16□□□□□ -2.06
TRM1YDR120C AIM34Q03673 198 aa2.16□□□□□ -2.06
TRM1YDR120C YIL134C-AQ45U18 67 aa2.16□□□□□ -2.06
TRM1YDR120C RAD6P06104 172 aa2.15□□□□□ -2.07
TRM1YDR120C YJL197C-AP0C5P0 93 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms