RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C YAR068WP39564 161 aa1.24□□□□□ -2.21
MSH6YDR097C YGR017WP53210 297 aa1.24□□□□□ -2.21
MSH6YDR097C APS2Q00381 147 aa1.24□□□□□ -2.21
MSH6YDR097C NCE101Q02820 53 aa1.24□□□□□ -2.21
MSH6YDR097C YOR192C-CQ3E736 78 aa1.24□□□□□ -2.21
MSH6YDR097C SLO1Q3E784 85 aa1.24□□□□□ -2.21
MSH6YDR097C YLR365WQ7LIF2 110 aa1.24□□□□□ -2.21
MSH6YDR097C SRP21P32342 167 aa1.24□□□□□ -2.21
MSH6YDR097C SRX1P36077 127 aa1.24□□□□□ -2.21
MSH6YDR097C HUA1P40325 198 aa1.24□□□□□ -2.21
MSH6YDR097C GPI2P46961 280 aa1.24□□□□□ -2.21
MSH6YDR097C BRP1P53194 125 aa1.24□□□□□ -2.21
MSH6YDR097C YPR108W-AQ3E7B3 70 aa1.24□□□□□ -2.21
MSH6YDR097C YOS1Q3E834 85 aa1.24□□□□□ -2.21
MSH6YDR097C Q0144Q9ZZW2 109 aa1.24□□□□□ -2.21
MSH6YDR097C YKR070WP36151 352 aaKnown RBP1.24□□□□□ -2.21
MSH6YDR097C YJR015WP47090 510 aa1.24□□□□□ -2.21
MSH6YDR097C DSK2P48510 373 aa1.24□□□□□ -2.21
MSH6YDR097C YPR174CQ06616 221 aaPredicted RBP1.24□□□□□ -2.21
MSH6YDR097C YOR105WQ08504 108 aa1.24□□□□□ -2.21
MSH6YDR097C FIT3Q08907 204 aa1.24□□□□□ -2.21
MSH6YDR097C POC4Q12245 148 aaPredicted RBP1.24□□□□□ -2.21
MSH6YDR097C VMA11P32842 164 aa1.23□□□□□ -2.21
MSH6YDR097C RPB11P38902 120 aa1.23□□□□□ -2.21
MSH6YDR097C SNU13P39990 126 aaKnown RBP1.23□□□□□ -2.21
MSH6YDR097C GLE2P40066 365 aa1.23□□□□□ -2.21
MSH6YDR097C MSL1P40567 111 aaPredicted RBP1.23□□□□□ -2.21
MSH6YDR097C YDR391CQ04170 232 aa1.23□□□□□ -2.21
MSH6YDR097C YOL014WQ08110 124 aa1.23□□□□□ -2.21
MSH6YDR097C PRM3Q08931 133 aa1.23□□□□□ -2.21
MSH6YDR097C YCR075W-AQ3E830 75 aa1.23□□□□□ -2.21
MSH6YDR097C PAI3P01094 68 aa1.23□□□□□ -2.21
MSH6YDR097C RPS22AP0C0W1 130 aaKnown RBP1.23□□□□□ -2.21
MSH6YDR097C PRP11Q07350 266 aaPredicted RBP1.23□□□□□ -2.21
MSH6YDR097C ATG40Q99325 256 aa1.23□□□□□ -2.21
MSH6YDR097C QCR9P22289 66 aa1.23□□□□□ -2.21
MSH6YDR097C MRP49P32388 137 aa1.23□□□□□ -2.21
MSH6YDR097C HSP150P32478 413 aa1.23□□□□□ -2.21
MSH6YDR097C SNF11P38956 169 aa1.23□□□□□ -2.21
MSH6YDR097C MRPS8Q03799 155 aa1.23□□□□□ -2.21
MSH6YDR097C YHP1Q04116 353 aa1.23□□□□□ -2.21
MSH6YDR097C CNL1Q06333 122 aa1.23□□□□□ -2.21
MSH6YDR097C FLO9P39712 1322 aa1.23□□□□□ -2.21
MSH6YDR097C FZF1P32805 299 aa1.22□□□□□ -2.21
MSH6YDR097C SBH1P52870 82 aa1.22□□□□□ -2.21
MSH6YDR097C VPS71Q03433 280 aa1.22□□□□□ -2.21
MSH6YDR097C AIM34Q03673 198 aa1.22□□□□□ -2.21
MSH6YDR097C YLR363W-AQ3E747 85 aa1.22□□□□□ -2.21
MSH6YDR097C ANB1P19211 157 aa1.22□□□□□ -2.21
MSH6YDR097C HYP2P23301 157 aaKnown RBP1.22□□□□□ -2.21
MSH6YDR097C RPS27AP35997 82 aaKnown RBP1.22□□□□□ -2.21
MSH6YDR097C SFT2P38166 215 aa1.22□□□□□ -2.21
MSH6YDR097C RRT1P38192 103 aa1.22□□□□□ -2.21
MSH6YDR097C RPS27BP38711 82 aa1.22□□□□□ -2.21
MSH6YDR097C GEP7P53171 287 aa1.22□□□□□ -2.21
MSH6YDR097C RPL30P14120 105 aaKnown RBP1.22□□□□□ -2.21
MSH6YDR097C CCS1P40202 249 aaKnown RBP1.22□□□□□ -2.21
MSH6YDR097C CYB5P40312 120 aa1.22□□□□□ -2.21
MSH6YDR097C MOB1P40484 314 aa1.22□□□□□ -2.21
MSH6YDR097C DYN2Q02647 92 aa1.22□□□□□ -2.21
MSH6YDR097C MIX17Q03667 156 aa1.22□□□□□ -2.21
MSH6YDR097C YIL102C-AQ2V2P5 75 aa1.22□□□□□ -2.21
MSH6YDR097C RPS22BQ3E7Y3 130 aaKnown RBP1.22□□□□□ -2.21
MSH6YDR097C YBR209WP38311 105 aa1.21□□□□□ -2.22
MSH6YDR097C YGL193CP53097 103 aa1.21□□□□□ -2.22
MSH6YDR097C RAV2Q03956 351 aa1.21□□□□□ -2.22
MSH6YDR097C RIM9Q04734 239 aa1.21□□□□□ -2.22
MSH6YDR097C YDL022C-AP0C5L6 82 aa1.21□□□□□ -2.22
MSH6YDR097C YHR032W-AP0C5N6 59 aa1.21□□□□□ -2.22
MSH6YDR097C YHR138CP38841 114 aaPredicted RBP1.21□□□□□ -2.22
MSH6YDR097C YEL067CP39978 195 aa1.21□□□□□ -2.22
MSH6YDR097C LST8P41318 303 aa1.21□□□□□ -2.22
MSH6YDR097C FIP1P45976 327 aa1.21□□□□□ -2.22
MSH6YDR097C TOM7P53507 60 aa1.21□□□□□ -2.22
MSH6YDR097C ELC1Q03071 99 aa1.21□□□□□ -2.22
MSH6YDR097C RDS3Q06835 107 aaPredicted RBP1.21□□□□□ -2.22
MSH6YDR097C IRC19Q07843 230 aa1.21□□□□□ -2.22
MSH6YDR097C BOL1Q3E793 110 aa1.21□□□□□ -2.22
MSH6YDR097C HMRA1P0CY11 126 aa1.2□□□□□ -2.22
MSH6YDR097C FPR1P20081 114 aaKnown RBP1.2□□□□□ -2.22
MSH6YDR097C YFL065CP43539 102 aa1.2□□□□□ -2.22
MSH6YDR097C MIC27P50945 234 aa1.2□□□□□ -2.22
MSH6YDR097C YIL014C-AQ02598 104 aa1.2□□□□□ -2.22
MSH6YDR097C YPR195CQ06594 109 aa1.2□□□□□ -2.22
MSH6YDR097C YPR203WQ08994 102 aa1.2□□□□□ -2.22
MSH6YDR097C YLR236CA0A023PZG4 107 aa1.2□□□□□ -2.22
MSH6YDR097C YOR304C-AO14468 76 aa1.2□□□□□ -2.22
MSH6YDR097C YPL073CP40323 161 aa1.2□□□□□ -2.22
MSH6YDR097C YGL149WP53116 101 aa1.2□□□□□ -2.22
MSH6YDR097C YGR219WP53307 113 aa1.2□□□□□ -2.22
MSH6YDR097C YNR077CP53758 84 aa1.2□□□□□ -2.22
MSH6YDR097C GIS2P53849 153 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
MSH6YDR097C YLR296WQ05898 108 aa1.2□□□□□ -2.22
MSH6YDR097C FCY1Q12178 158 aa1.2□□□□□ -2.22
MSH6YDR097C YSF3P0C074 85 aaPredicted RBP1.2□□□□□ -2.22
MSH6YDR097C MRPL31P14063 131 aaPredicted RBP1.2□□□□□ -2.22
MSH6YDR097C UGX2P32772 223 aa1.2□□□□□ -2.22
MSH6YDR097C YKR032WP36127 104 aa1.2□□□□□ -2.22
MSH6YDR097C YIL059CP40520 121 aa1.2□□□□□ -2.22
MSH6YDR097C ATP19P81451 68 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms