RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	YBR126W-A	Q8TGU7	68 aa		4.14	□□□□□ -1.75
DBF4	YDR052C	YHR213W	P0CI67	198 aa		4.13	□□□□□ -1.75
DBF4	YDR052C	RPL30	P14120	105 aa	Known RBP	4.13	□□□□□ -1.75
DBF4	YDR052C	EAF6	P47128	113 aa		4.13	□□□□□ -1.75
DBF4	YDR052C	RSM19	P53733	91 aa	Predicted RBP	4.13	□□□□□ -1.75
DBF4	YDR052C	BEM2	P39960	2167 aa	Known RBP	4.13	□□□□□ -1.75
DBF4	YDR052C	SPT4	P32914	102 aa	Predicted RBP	4.13	□□□□□ -1.75
DBF4	YDR052C	YMR141C	P40211	102 aa		4.13	□□□□□ -1.75
DBF4	YDR052C	ATP23	P53722	227 aa		4.13	□□□□□ -1.75
DBF4	YDR052C	SMD1	Q02260	146 aa	Predicted RBP	4.13	□□□□□ -1.75
DBF4	YDR052C	MGR2	Q02889	113 aa		4.13	□□□□□ -1.75
DBF4	YDR052C	COA3	Q3E7B2	85 aa		4.13	□□□□□ -1.75
DBF4	YDR052C	YOR376W-A	Q3E805	51 aa		4.13	□□□□□ -1.75
DBF4	YDR052C	AGA1	P32323	725 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	KEG1	P43614	200 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	YGL034C	P53186	121 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	RPL15B	P54780	204 aa	Predicted RBP	4.12	□□□□□ -1.75
DBF4	YDR052C	ICY1	Q04329	127 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	YLR111W	Q12528	110 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	DIF1	O13577	133 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	RPL16A	P26784	199 aa	Known RBP	4.12	□□□□□ -1.75
DBF4	YDR052C	ECO1	P43605	281 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	SUT1	P53032	299 aa	Known RBP	4.12	□□□□□ -1.75
DBF4	YDR052C	YNL234W	P53857	426 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	DAD4	P69851	72 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	PRM7	Q12459	698 aa		4.12	□□□□□ -1.75
DBF4	YDR052C	YML122C	Q03207	126 aa		4.11	□□□□□ -1.75
DBF4	YDR052C	YLR194C	Q05777	254 aa		4.11	□□□□□ -1.75
DBF4	YDR052C	PBP4	Q07362	185 aa	Known RBP	4.11	□□□□□ -1.75
DBF4	YDR052C	PPT2	Q12036	173 aa		4.11	□□□□□ -1.75
DBF4	YDR052C	SPO24	Q3E752	67 aa		4.11	□□□□□ -1.75
DBF4	YDR052C	NAG1	Q8TGN9	163 aa		4.11	□□□□□ -1.75
DBF4	YDR052C	MED6	P38782	295 aa		4.1	□□□□□ -1.75
DBF4	YDR052C	YNL190W	P53872	204 aa		4.1	□□□□□ -1.75
DBF4	YDR052C	NCE101	Q02820	53 aa		4.1	□□□□□ -1.75
DBF4	YDR052C	MPC2	P38857	129 aa		4.1	□□□□□ -1.75
DBF4	YDR052C	ICS3	P47034	131 aa		4.1	□□□□□ -1.75
DBF4	YDR052C	ERI1	P62651	68 aa	Known RBP	4.1	□□□□□ -1.75
DBF4	YDR052C	MTC6	P38849	526 aa		4.09	□□□□□ -1.75
DBF4	YDR052C	SEC16	P48415	2195 aa	Known RBP	4.09	□□□□□ -1.76
DBF4	YDR052C	AIM4	P38305	123 aa	Predicted RBP	4.09	□□□□□ -1.76
DBF4	YDR052C	CTR2	P38865	189 aa		4.09	□□□□□ -1.76
DBF4	YDR052C	PGU1	P47180	361 aa		4.09	□□□□□ -1.76
DBF4	YDR052C	YMR181C	Q03231	154 aa		4.09	□□□□□ -1.76
DBF4	YDR052C	YGL258W-A	Q3E740	77 aa		4.09	□□□□□ -1.76
DBF4	YDR052C	YLR285C-A	Q3E771	56 aa		4.09	□□□□□ -1.76
DBF4	YDR052C	YHR214C-E	Q8TGK0	99 aa		4.09	□□□□□ -1.76
DBF4	YDR052C	YHR214C-D	P0CX93	97 aa		4.08	□□□□□ -1.76
DBF4	YDR052C	SPS100	P13130	326 aa		4.08	□□□□□ -1.76
DBF4	YDR052C	LDB16	P25587	256 aa		4.08	□□□□□ -1.76
DBF4	YDR052C	FHN1	P53279	174 aa		4.08	□□□□□ -1.76
DBF4	YDR052C	FAS1	P07149	2051 aa	Known RBP	4.08	□□□□□ -1.76
DBF4	YDR052C	ACC1	Q00955	2233 aa	Known RBP	4.07	□□□□□ -1.76
DBF4	YDR052C	MSA2	P36157	363 aa		4.07	□□□□□ -1.76
DBF4	YDR052C	PEX17	P40155	199 aa		4.07	□□□□□ -1.76
DBF4	YDR052C	GLO1	P50107	326 aa		4.07	□□□□□ -1.76
DBF4	YDR052C	YDR274C	P87283	123 aa		4.07	□□□□□ -1.76
DBF4	YDR052C	YHR022C	P38763	256 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	MIG3	P39943	394 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	DCV1	P43595	202 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	TOS6	P48560	102 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	YMR295C	Q03559	197 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	IRC19	Q07843	230 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	VPS68	Q12016	184 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	YLR156W	P0CE96	114 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	YLR159W	P0CE97	114 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	YLR161W	P0CE98	114 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	RPB9	P27999	122 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	YKR045C	P36138	183 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	SPI1	P40092	148 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	EDC1	P53080	175 aa	Predicted RBP	4.06	□□□□□ -1.76
DBF4	YDR052C	MRPS12	P53732	153 aa		4.06	□□□□□ -1.76
DBF4	YDR052C	NCE102	Q12207	173 aa	RIP-Chip data	4.06	□□□□□ -1.76	not detected
DBF4	YDR052C	RPC11	Q04307	110 aa	Predicted RBP	4.05	□□□□□ -1.76
DBF4	YDR052C	YDL009C	Q12210	107 aa		4.05	□□□□□ -1.76
DBF4	YDR052C	BPH1	P25356	2167 aa		4.05	□□□□□ -1.76
DBF4	YDR052C	RSM18	P40033	138 aa		4.04	□□□□□ -1.76
DBF4	YDR052C	YFR035C	P43608	114 aa		4.04	□□□□□ -1.76
DBF4	YDR052C	YMR254C	Q04838	102 aa		4.04	□□□□□ -1.76
DBF4	YDR052C	ATP20	Q12233	115 aa		4.04	□□□□□ -1.76
DBF4	YDR052C	YOR381W-A	Q3E804	55 aa		4.04	□□□□□ -1.76
DBF4	YDR052C	RPL26A	P05743	127 aa	Known RBP	4.04	□□□□□ -1.76
DBF4	YDR052C	ATP15	P21306	62 aa		4.04	□□□□□ -1.76
DBF4	YDR052C	YCR022C	P25620	114 aa		4.04	□□□□□ -1.76
DBF4	YDR052C	YAL065C	O13511	128 aa		4.03	□□□□□ -1.76
DBF4	YDR052C	HHF1	P02309	103 aa	Known RBP	4.03	□□□□□ -1.76
DBF4	YDR052C	HUR1	P45820	110 aa		4.03	□□□□□ -1.76
DBF4	YDR052C	PCP1	P53259	346 aa		4.03	□□□□□ -1.76
DBF4	YDR052C	YGR121W-A	Q3E816	71 aa		4.03	□□□□□ -1.76
DBF4	YDR052C	RPS14B	P39516	138 aa	Known RBP	4.03	□□□□□ -1.76
DBF4	YDR052C	YIL029C	P40538	142 aa		4.03	□□□□□ -1.76
DBF4	YDR052C	IMP2	P46972	177 aa		4.03	□□□□□ -1.76
DBF4	YDR052C	YGR018C	P53211	109 aa		4.03	□□□□□ -1.76
DBF4	YDR052C	SEN1	Q00416	2231 aa	Known RBP	4.02	□□□□□ -1.77
DBF4	YDR052C	YEL045C	P32616	141 aa		4.01	□□□□□ -1.77
DBF4	YDR052C	KRE9	P39005	276 aa		4.01	□□□□□ -1.77
DBF4	YDR052C	TOS8	P53147	276 aa		4.01	□□□□□ -1.77
DBF4	YDR052C	YLR162W	Q06235	118 aa		4.01	□□□□□ -1.77
DBF4	YDR052C	BRR2	P32639	2163 aa	Known RBP	4.01	□□□□□ -1.77
DBF4	YDR052C	YAL064W-B	O13512	126 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms