RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W CNL1Q06333 122 aa0.68□□□□□ -2.3
SHS1YDL225W SPC3Q12133 184 aa0.68□□□□□ -2.3
SHS1YDL225W FYV7Q12247 151 aa0.68□□□□□ -2.3
SHS1YDL225W USO1P25386 1790 aa0.67□□□□□ -2.3
SHS1YDL225W URB1P34241 1764 aaKnown RBP0.67□□□□□ -2.3
SHS1YDL225W RPL40AP0CH08 128 aaKnown RBP0.67□□□□□ -2.3
SHS1YDL225W RPL40BP0CH09 128 aaKnown RBP0.67□□□□□ -2.3
SHS1YDL225W RPC19P28000 142 aaKnown RBP0.67□□□□□ -2.3
SHS1YDL225W SMX2P40204 77 aaKnown RBP0.67□□□□□ -2.3
SHS1YDL225W RPS12P48589 143 aaKnown RBP0.67□□□□□ -2.3
SHS1YDL225W BRP1P53194 125 aa0.67□□□□□ -2.3
SHS1YDL225W TIM8P57744 87 aa0.67□□□□□ -2.3
SHS1YDL225W YLR118CQ12354 227 aa0.67□□□□□ -2.3
SHS1YDL225W TY4B-HP0C2J7 1802 aa0.66□□□□□ -2.3
SHS1YDL225W TY4B-JP47024 1803 aa0.66□□□□□ -2.3
SHS1YDL225W GSC2P40989 1895 aa0.66□□□□□ -2.3
SHS1YDL225W MRPL44P19956 98 aa0.66□□□□□ -2.3
SHS1YDL225W LHP1P33399 275 aaKnown RBP0.66□□□□□ -2.3
SHS1YDL225W YBR090CP38253 122 aa0.66□□□□□ -2.3
SHS1YDL225W MVB12P42939 101 aa0.66□□□□□ -2.3
SHS1YDL225W SFT1P43682 97 aa0.66□□□□□ -2.3
SHS1YDL225W EMC4P53073 190 aa0.66□□□□□ -2.3
SHS1YDL225W MPC1P53157 130 aaKnown RBP0.66□□□□□ -2.3
SHS1YDL225W YGR164WP53291 111 aa0.66□□□□□ -2.3
SHS1YDL225W RPL22BP56628 122 aaKnown RBP0.66□□□□□ -2.3
SHS1YDL225W COA6Q3E846 104 aa0.66□□□□□ -2.3
SHS1YDL225W YCL001W-BQ96VH2 84 aa0.66□□□□□ -2.3
SHS1YDL225W RRP5Q05022 1729 aaKnown RBP0.66□□□□□ -2.3
SHS1YDL225W UBC5P15732 148 aa0.65□□□□□ -2.3
SHS1YDL225W SEC59P20048 519 aa0.65□□□□□ -2.3
SHS1YDL225W MRP49P32388 137 aa0.65□□□□□ -2.3
SHS1YDL225W HYM1P32464 399 aa0.65□□□□□ -2.3
SHS1YDL225W YBR032WP38223 100 aa0.65□□□□□ -2.3
SHS1YDL225W AIM18P38884 321 aa0.65□□□□□ -2.3
SHS1YDL225W RUB1Q03919 77 aa0.65□□□□□ -2.3
SHS1YDL225W ZEO1Q08245 113 aa0.65□□□□□ -2.3
SHS1YDL225W FIT3Q08907 204 aa0.65□□□□□ -2.3
SHS1YDL225W OCA6Q12454 224 aa0.65□□□□□ -2.3
SHS1YDL225W YLR307C-AQ3E825 87 aa0.65□□□□□ -2.3
SHS1YDL225W HUG1Q6Q5K6 68 aa0.65□□□□□ -2.3
SHS1YDL225W TY1B-NL2Q99337 1749 aaKnown RBP0.65□□□□□ -2.3
SHS1YDL225W UTP10P42945 1769 aaKnown RBP0.65□□□□□ -2.31
SHS1YDL225W YER039C-AP0CD97 72 aa0.65□□□□□ -2.31
SHS1YDL225W RPL43AP0CX25 92 aaKnown RBP0.65□□□□□ -2.31
SHS1YDL225W RPL43BP0CX26 92 aa0.65□□□□□ -2.31
SHS1YDL225W HAP3P13434 144 aa0.65□□□□□ -2.31
SHS1YDL225W YEA6P39953 335 aa0.65□□□□□ -2.31
SHS1YDL225W GAT4P40569 121 aa0.65□□□□□ -2.31
SHS1YDL225W YGL149WP53116 101 aa0.65□□□□□ -2.31
SHS1YDL225W FCF2Q12035 217 aaPredicted RBP0.65□□□□□ -2.31
SHS1YDL225W YLR099W-AQ3E798 87 aa0.65□□□□□ -2.31
SHS1YDL225W IRA2P19158 3079 aa0.64□□□□□ -2.31
SHS1YDL225W PFY1P07274 126 aa0.64□□□□□ -2.31
SHS1YDL225W PHS1P40857 217 aa0.64□□□□□ -2.31
SHS1YDL225W NHP10Q03435 203 aa0.64□□□□□ -2.31
SHS1YDL225W YOR097CQ12274 175 aaPredicted RBP0.64□□□□□ -2.31
SHS1YDL225W BRR2P32639 2163 aaKnown RBP0.64□□□□□ -2.31
SHS1YDL225W FKS3Q04952 1785 aa0.63□□□□□ -2.31
SHS1YDL225W YCR099CP25657 155 aa0.63□□□□□ -2.31
SHS1YDL225W QCR10P37299 77 aa0.63□□□□□ -2.31
SHS1YDL225W AIM4P38305 123 aaPredicted RBP0.63□□□□□ -2.31
SHS1YDL225W RPB11P38902 120 aa0.63□□□□□ -2.31
SHS1YDL225W GNA1P43577 159 aaPredicted RBP0.63□□□□□ -2.31
SHS1YDL225W YLR296WQ05898 108 aa0.63□□□□□ -2.31
SHS1YDL225W SWC7Q06707 132 aa0.63□□□□□ -2.31
SHS1YDL225W FAS2P19097 1887 aaKnown RBP0.63□□□□□ -2.31
SHS1YDL225W TRA1P38811 3744 aa0.63□□□□□ -2.31
SHS1YDL225W YCR050CP25630 102 aa0.62□□□□□ -2.31
SHS1YDL225W MRPL11P36521 249 aaPredicted RBP0.62□□□□□ -2.31
SHS1YDL225W PDX3P38075 228 aaKnown RBP0.62□□□□□ -2.31
SHS1YDL225W YBR013CP38215 129 aa0.62□□□□□ -2.31
SHS1YDL225W MIC27P50945 234 aa0.62□□□□□ -2.31
SHS1YDL225W ELC1Q03071 99 aa0.62□□□□□ -2.31
SHS1YDL225W YMR090WQ04304 227 aaKnown RBP0.62□□□□□ -2.31
SHS1YDL225W TVP18Q04767 167 aa0.62□□□□□ -2.31
SHS1YDL225W GTT2Q12390 233 aa0.62□□□□□ -2.31
SHS1YDL225W FLO1P32768 1537 aa0.62□□□□□ -2.31
SHS1YDL225W FIG2P25653 1609 aa0.62□□□□□ -2.31
SHS1YDL225W IRA1P18963 3092 aa0.62□□□□□ -2.31
SHS1YDL225W RTC6O14464 93 aa0.62□□□□□ -2.31
SHS1YDL225W RPL14AP36105 138 aaKnown RBP0.62□□□□□ -2.31
SHS1YDL225W RPL14BP38754 138 aaKnown RBP0.62□□□□□ -2.31
SHS1YDL225W YAL064WP39711 94 aa0.62□□□□□ -2.31
SHS1YDL225W YMR103CQ04436 120 aa0.62□□□□□ -2.31
SHS1YDL225W YCR075W-AQ3E830 75 aa0.62□□□□□ -2.31
SHS1YDL225W ADK1P07170 222 aaKnown RBP0.61□□□□□ -2.31
SHS1YDL225W YLR157W-EP0CF00 54 aa0.61□□□□□ -2.31
SHS1YDL225W UBC4P15731 148 aa0.61□□□□□ -2.31
SHS1YDL225W PAM16P42949 149 aa0.61□□□□□ -2.31
SHS1YDL225W MIX14Q04341 121 aa0.61□□□□□ -2.31
SHS1YDL225W YLR042CQ07990 161 aa0.61□□□□□ -2.31
SHS1YDL225W YOR034C-AQ3E735 80 aa0.61□□□□□ -2.31
SHS1YDL225W YKL018C-AQ3E7A7 99 aa0.61□□□□□ -2.31
SHS1YDL225W YOS1Q3E834 85 aa0.61□□□□□ -2.31
SHS1YDL225W YLR365WQ7LIF2 110 aa0.61□□□□□ -2.31
SHS1YDL225W BPH1P25356 2167 aa0.61□□□□□ -2.31
SHS1YDL225W STT4P37297 1900 aa0.61□□□□□ -2.31
SHS1YDL225W RIM15P43565 1770 aa0.6□□□□□ -2.31
SHS1YDL225W YSF3P0C074 85 aaPredicted RBP0.6□□□□□ -2.31
SHS1YDL225W SNF11P38956 169 aa0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms