RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W PAU2P32612 120 aa3.34□□□□□ -1.87
KIN28YDL108W MIG3P39943 394 aa3.34□□□□□ -1.87
KIN28YDL108W YPL038W-AQ3E7B4 63 aa3.34□□□□□ -1.87
KIN28YDL108W YAL067W-AQ8TGK6 75 aa3.34□□□□□ -1.87
KIN28YDL108W YLR419WQ06698 1435 aaKnown RBP3.34□□□□□ -1.88
KIN28YDL108W TY4B-HP0C2J7 1802 aa3.33□□□□□ -1.88
KIN28YDL108W YBR292CP38357 123 aa3.33□□□□□ -1.88
KIN28YDL108W HSP10P38910 106 aa3.33□□□□□ -1.88
KIN28YDL108W GCV3P39726 170 aaPredicted RBP3.33□□□□□ -1.88
KIN28YDL108W ATG41Q12048 136 aa3.33□□□□□ -1.88
KIN28YDL108W YPR145C-AQ2V2P0 78 aa3.33□□□□□ -1.88
KIN28YDL108W YIR020CP40575 100 aa3.32□□□□□ -1.88
KIN28YDL108W ICS3P47034 131 aa3.32□□□□□ -1.88
KIN28YDL108W BOL2P53082 120 aa3.32□□□□□ -1.88
KIN28YDL108W RGM1Q00453 211 aa3.32□□□□□ -1.88
KIN28YDL108W YPR153WQ06537 140 aa3.32□□□□□ -1.88
KIN28YDL108W YDR381C-AQ3E6R5 114 aa3.32□□□□□ -1.88
KIN28YDL108W FKS3Q04952 1785 aa3.32□□□□□ -1.88
KIN28YDL108W FKS1P38631 1876 aaKnown RBP3.32□□□□□ -1.88
KIN28YDL108W RPL40AP0CH08 128 aaKnown RBP3.31□□□□□ -1.88
KIN28YDL108W RPL40BP0CH09 128 aaKnown RBP3.31□□□□□ -1.88
KIN28YDL108W YKR032WP36127 104 aa3.31□□□□□ -1.88
KIN28YDL108W YGR269WP40326 108 aa3.31□□□□□ -1.88
KIN28YDL108W DCV1P43595 202 aa3.31□□□□□ -1.88
KIN28YDL108W PAU12P53343 120 aa3.31□□□□□ -1.88
KIN28YDL108W YOL118CQ08259 102 aa3.31□□□□□ -1.88
KIN28YDL108W YPR013CQ12145 317 aa3.31□□□□□ -1.88
KIN28YDL108W CHC1P22137 1653 aaKnown RBP3.3□□□□□ -1.88
KIN28YDL108W CDC25P04821 1589 aa3.3□□□□□ -1.88
KIN28YDL108W UFD4P33202 1483 aa3.3□□□□□ -1.88
KIN28YDL108W FLO9P39712 1322 aa3.3□□□□□ -1.88
KIN28YDL108W UTH1P36135 365 aa3.3□□□□□ -1.88
KIN28YDL108W YDL157CQ12082 118 aa3.3□□□□□ -1.88
KIN28YDL108W YIL102C-AQ2V2P5 75 aa3.3□□□□□ -1.88
KIN28YDL108W PAU19P0CE85 124 aa3.29□□□□□ -1.88
KIN28YDL108W PAU3P25610 124 aa3.29□□□□□ -1.88
KIN28YDL108W IMP2P46972 177 aa3.29□□□□□ -1.88
KIN28YDL108W RTC6O14464 93 aa3.28□□□□□ -1.88
KIN28YDL108W PAU24P38155 120 aa3.28□□□□□ -1.88
KIN28YDL108W YHR180WP38868 163 aa3.28□□□□□ -1.88
KIN28YDL108W YIL014C-AQ02598 104 aa3.28□□□□□ -1.88
KIN28YDL108W RKR1Q04781 1562 aa3.27□□□□□ -1.89
KIN28YDL108W MRP17P28778 131 aa3.27□□□□□ -1.89
KIN28YDL108W YNR077CP53758 84 aa3.27□□□□□ -1.89
KIN28YDL108W MRPS16Q02608 121 aa3.27□□□□□ -1.89
KIN28YDL108W YOR343CQ12484 108 aa3.27□□□□□ -1.89
KIN28YDL108W UBR2Q07963 1872 aa3.26□□□□□ -1.89
KIN28YDL108W RPL26AP05743 127 aaKnown RBP3.26□□□□□ -1.89
KIN28YDL108W YHR214C-DP0CX93 97 aa3.26□□□□□ -1.89
KIN28YDL108W PAU16P35994 123 aa3.26□□□□□ -1.89
KIN28YDL108W PAU15P40585 124 aa3.26□□□□□ -1.89
KIN28YDL108W YFL051CP43552 160 aa3.26□□□□□ -1.89
KIN28YDL108W CIS3P47001 227 aa3.26□□□□□ -1.89
KIN28YDL108W YOR105WQ08504 108 aa3.26□□□□□ -1.89
KIN28YDL108W YOR268CQ08734 132 aa3.26□□□□□ -1.89
KIN28YDL108W NHP2P32495 156 aaPredicted RBP3.25□□□□□ -1.89
KIN28YDL108W MRPS9P38120 278 aa3.25□□□□□ -1.89
KIN28YDL108W YBR209WP38311 105 aa3.25□□□□□ -1.89
KIN28YDL108W YHL037CP38733 133 aa3.25□□□□□ -1.89
KIN28YDL108W YGL149WP53116 101 aa3.25□□□□□ -1.89
KIN28YDL108W TY4B-JP47024 1803 aa3.25□□□□□ -1.89
KIN28YDL108W THO2P53552 1597 aaKnown RBP3.25□□□□□ -1.89
KIN28YDL108W NTE1Q04958 1679 aa3.24□□□□□ -1.89
KIN28YDL108W RPL36BO14455 100 aaKnown RBP3.24□□□□□ -1.89
KIN28YDL108W RPL36AP05745 100 aaPredicted RBP3.24□□□□□ -1.89
KIN28YDL108W ROX3P25046 220 aa3.24□□□□□ -1.89
KIN28YDL108W RPL33BP41056 107 aaKnown RBP3.24□□□□□ -1.89
KIN28YDL108W LSM6Q06406 86 aaKnown RBP3.24□□□□□ -1.89
KIN28YDL108W YPR195CQ06594 109 aa3.24□□□□□ -1.89
KIN28YDL108W YBT1P32386 1661 aa3.24□□□□□ -1.89
KIN28YDL108W PMD1P32634 1753 aa3.23□□□□□ -1.89
KIN28YDL108W YLR236CA0A023PZG4 107 aa3.23□□□□□ -1.89
KIN28YDL108W SRX1P36077 127 aa3.23□□□□□ -1.89
KIN28YDL108W MHF2Q3E829 80 aa3.23□□□□□ -1.89
KIN28YDL108W MOT1P32333 1867 aa3.22□□□□□ -1.89
KIN28YDL108W YAL065CO13511 128 aa3.22□□□□□ -1.89
KIN28YDL108W RPS23AP0CX29 145 aaKnown RBP3.22□□□□□ -1.89
KIN28YDL108W RPS23BP0CX30 145 aa3.22□□□□□ -1.89
KIN28YDL108W SMX2P40204 77 aaKnown RBP3.22□□□□□ -1.89
KIN28YDL108W PAU5P43575 122 aa3.22□□□□□ -1.89
KIN28YDL108W YOR314WQ12506 109 aa3.22□□□□□ -1.89
KIN28YDL108W RIM15P43565 1770 aa3.21□□□□□ -1.9
KIN28YDL108W COX23P38824 151 aa3.21□□□□□ -1.9
KIN28YDL108W YEL014CP39999 101 aa3.21□□□□□ -1.9
KIN28YDL108W YFL012WP43580 148 aa3.21□□□□□ -1.9
KIN28YDL108W QCR8P08525 94 aa3.2□□□□□ -1.9
KIN28YDL108W HSP150P32478 413 aa3.2□□□□□ -1.9
KIN28YDL108W YBR027CP38220 110 aa3.2□□□□□ -1.9
KIN28YDL108W YJL027CP47063 138 aaPredicted RBP3.2□□□□□ -1.9
KIN28YDL108W YLR194CQ05777 254 aa3.2□□□□□ -1.9
KIN28YDL108W YKL065W-AQ2V2P2 73 aa3.2□□□□□ -1.9
KIN28YDL108W APC1P53886 1748 aa3.19□□□□□ -1.9
KIN28YDL108W MRPL31P14063 131 aaPredicted RBP3.19□□□□□ -1.9
KIN28YDL108W MRPL27P36526 146 aaPredicted RBP3.19□□□□□ -1.9
KIN28YDL108W POR2P40478 281 aa3.19□□□□□ -1.9
KIN28YDL108W LST8P41318 303 aa3.19□□□□□ -1.9
KIN28YDL108W YKL023C-AQ2V2P3 75 aa3.19□□□□□ -1.9
KIN28YDL108W FAS1P07149 2051 aaKnown RBP3.19□□□□□ -1.9
KIN28YDL108W YOR093CQ12275 1648 aa3.19□□□□□ -1.9
KIN28YDL108W COX8P04039 78 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms