RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W RTR2Q12378 196 aa0.78□□□□□ -2.29
SNF5YBR289W SEC16P48415 2195 aaKnown RBP0.78□□□□□ -2.29
SNF5YBR289W KIN28P06242 306 aa0.77□□□□□ -2.29
SNF5YBR289W YER039C-AP0CD97 72 aa0.77□□□□□ -2.29
SNF5YBR289W MRPL15P36523 253 aa0.77□□□□□ -2.29
SNF5YBR289W RPB11P38902 120 aa0.77□□□□□ -2.29
SNF5YBR289W YLR042CQ07990 161 aa0.77□□□□□ -2.29
SNF5YBR289W GSP1P32835 219 aaKnown RBP0.77□□□□□ -2.29
SNF5YBR289W TOM1Q03280 3268 aa0.76□□□□□ -2.29
SNF5YBR289W ATG8P38182 117 aaRIP-Chip data0.76□□□□□ -2.29not detected
SNF5YBR289W YAR029WP39549 74 aa0.76□□□□□ -2.29
SNF5YBR289W DCV1P43595 202 aa0.76□□□□□ -2.29
SNF5YBR289W BRP1P53194 125 aa0.76□□□□□ -2.29
SNF5YBR289W GPI11Q06636 219 aa0.76□□□□□ -2.29
SNF5YBR289W YDR524C-BQ3E6R4 66 aa0.76□□□□□ -2.29
SNF5YBR289W MRPL44P19956 98 aa0.76□□□□□ -2.29
SNF5YBR289W GTT2Q12390 233 aa0.76□□□□□ -2.29
SNF5YBR289W KTI11Q3E840 82 aa0.76□□□□□ -2.29
SNF5YBR289W FUN14P18411 198 aa0.75□□□□□ -2.29
SNF5YBR289W ANB1P19211 157 aa0.75□□□□□ -2.29
SNF5YBR289W YKL044WP36092 106 aa0.75□□□□□ -2.29
SNF5YBR289W YFL051CP43552 160 aa0.75□□□□□ -2.29
SNF5YBR289W YFR035CP43608 114 aa0.75□□□□□ -2.29
SNF5YBR289W ECM29P38737 1868 aa0.75□□□□□ -2.29
SNF5YBR289W RTC6O14464 93 aa0.75□□□□□ -2.29
SNF5YBR289W PAU21P0CE86 164 aa0.75□□□□□ -2.29
SNF5YBR289W PAU22P0CE87 164 aa0.75□□□□□ -2.29
SNF5YBR289W NMT1P14743 455 aa0.75□□□□□ -2.29
SNF5YBR289W ECM31P38122 312 aa0.75□□□□□ -2.29
SNF5YBR289W RGI1P40043 161 aaPredicted RBP0.75□□□□□ -2.29
SNF5YBR289W YGL230CP53074 147 aa0.75□□□□□ -2.29
SNF5YBR289W YGL149WP53116 101 aa0.75□□□□□ -2.29
SNF5YBR289W YPL067CQ02754 198 aa0.75□□□□□ -2.29
SNF5YBR289W NAT5Q08689 176 aa0.75□□□□□ -2.29
SNF5YBR289W FCF2Q12035 217 aaPredicted RBP0.75□□□□□ -2.29
SNF5YBR289W YKL068W-AQ3E826 78 aa0.75□□□□□ -2.29
SNF5YBR289W SEC59P20048 519 aa0.74□□□□□ -2.29
SNF5YBR289W SNF11P38956 169 aa0.74□□□□□ -2.29
SNF5YBR289W PAM16P42949 149 aa0.74□□□□□ -2.29
SNF5YBR289W ERV14P53173 138 aa0.74□□□□□ -2.29
SNF5YBR289W YCR101CP25607 182 aa0.74□□□□□ -2.29
SNF5YBR289W YCR099CP25657 155 aa0.74□□□□□ -2.29
SNF5YBR289W EMP24P32803 203 aaKnown RBP0.74□□□□□ -2.29
SNF5YBR289W RPS12P48589 143 aaKnown RBP0.74□□□□□ -2.29
SNF5YBR289W GPI19Q04082 140 aa0.74□□□□□ -2.29
SNF5YBR289W YBR027CP38220 110 aa0.73□□□□□ -2.29
SNF5YBR289W HSP10P38910 106 aa0.73□□□□□ -2.29
SNF5YBR289W HUA1P40325 198 aa0.73□□□□□ -2.29
SNF5YBR289W OCA6Q12454 224 aa0.73□□□□□ -2.29
SNF5YBR289W YGL014C-AP0C5N1 53 aa0.73□□□□□ -2.29
SNF5YBR289W HYP2P23301 157 aaKnown RBP0.73□□□□□ -2.29
SNF5YBR289W RPL37AP49166 88 aaKnown RBP0.73□□□□□ -2.29
SNF5YBR289W FIT1Q04433 528 aa0.73□□□□□ -2.29
SNF5YBR289W FYV7Q12247 151 aa0.73□□□□□ -2.29
SNF5YBR289W MHF1Q3E835 90 aa0.73□□□□□ -2.29
SNF5YBR289W PRE1P22141 198 aaKnown RBP0.73□□□□□ -2.29
SNF5YBR289W UTP11P34247 250 aaPredicted RBP0.73□□□□□ -2.29
SNF5YBR289W SED1Q01589 338 aa0.73□□□□□ -2.29
SNF5YBR289W YLR296WQ05898 108 aa0.73□□□□□ -2.29
SNF5YBR289W VAM10Q08474 114 aa0.73□□□□□ -2.29
SNF5YBR289W CCW12Q12127 133 aa0.73□□□□□ -2.29
SNF5YBR289W MYO1P08964 1928 aa0.72□□□□□ -2.29
SNF5YBR289W HAP2P06774 265 aa0.72□□□□□ -2.29
SNF5YBR289W YHR213WP0CI67 198 aa0.72□□□□□ -2.29
SNF5YBR289W HAP3P13434 144 aa0.72□□□□□ -2.29
SNF5YBR289W MRPL11P36521 249 aaPredicted RBP0.72□□□□□ -2.29
SNF5YBR289W YHR130CP38834 111 aa0.72□□□□□ -2.29
SNF5YBR289W AIM18P38884 321 aa0.72□□□□□ -2.29
SNF5YBR289W TDA2P40045 126 aa0.72□□□□□ -2.29
SNF5YBR289W LST8P41318 303 aa0.72□□□□□ -2.29
SNF5YBR289W PAU12P53343 120 aa0.72□□□□□ -2.29
SNF5YBR289W RPL33AP05744 107 aaKnown RBP0.72□□□□□ -2.29
SNF5YBR289W AIM4P38305 123 aaPredicted RBP0.72□□□□□ -2.29
SNF5YBR289W YER187WP40102 141 aa0.72□□□□□ -2.29
SNF5YBR289W SWM2P40342 146 aa0.72□□□□□ -2.29
SNF5YBR289W GNA1P43577 159 aaPredicted RBP0.72□□□□□ -2.29
SNF5YBR289W YGR164WP53291 111 aa0.72□□□□□ -2.29
SNF5YBR289W SEN15Q04675 128 aa0.72□□□□□ -2.29
SNF5YBR289W MED11Q99278 115 aa0.72□□□□□ -2.29
SNF5YBR289W YEA6P39953 335 aa0.71□□□□□ -2.3
SNF5YBR289W YIL014C-AQ02598 104 aa0.71□□□□□ -2.3
SNF5YBR289W YMR122CQ03879 124 aa0.71□□□□□ -2.3
SNF5YBR289W YLR365WQ7LIF2 110 aa0.71□□□□□ -2.3
SNF5YBR289W STT4P37297 1900 aa0.71□□□□□ -2.3
SNF5YBR289W YJL197C-AP0C5P0 93 aa0.71□□□□□ -2.3
SNF5YBR289W UBC5P15732 148 aa0.71□□□□□ -2.3
SNF5YBR289W YBR090CP38253 122 aa0.71□□□□□ -2.3
SNF5YBR289W YMR103CQ04436 120 aa0.71□□□□□ -2.3
SNF5YBR289W YLR194CQ05777 254 aa0.71□□□□□ -2.3
SNF5YBR289W PRM3Q08931 133 aa0.71□□□□□ -2.3
SNF5YBR289W YPL225WQ08971 146 aaKnown RBP0.71□□□□□ -2.3
SNF5YBR289W YPL261CQ08976 102 aa0.71□□□□□ -2.3
SNF5YBR289W YOR289WQ12012 251 aaPredicted RBP0.71□□□□□ -2.3
SNF5YBR289W RPL36BO14455 100 aaKnown RBP0.7□□□□□ -2.3
SNF5YBR289W RPL36AP05745 100 aaPredicted RBP0.7□□□□□ -2.3
SNF5YBR289W YOL013W-AP0C272 63 aaPredicted RBP0.7□□□□□ -2.3
SNF5YBR289W PAU2P32612 120 aa0.7□□□□□ -2.3
SNF5YBR289W YIL102CP40488 101 aa0.7□□□□□ -2.3
SNF5YBR289W OST5Q92316 86 aa0.7□□□□□ -2.3
SNF5YBR289W BUD23P25627 275 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms