RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 LCLAT1Q6UWP7 414 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 CLEC20AQ6ZU45 233 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 DENND5BQ6ZUT9 1274 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 HS6ST3Q8IZP7 471 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 ANKRD52Q8NB46 1076 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 TFAP2BQ92481 460 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 GCNAQ96QF7 691 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 SMOQ99835 787 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 XPO4Q9C0E2 1151 aaKnown RBP16.43■□□□□ 0.22
GHDC-209ENST00000588762 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
GHDC-209ENST00000588762 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 UXTQ9UBK9 157 aaPredicted RBP16.43■□□□□ 0.22
GHDC-209ENST00000588762 TSPAN16Q9UKR8 245 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 MRPS23Q9Y3D9 190 aaKnown RBP16.43■□□□□ 0.22
GHDC-209ENST00000588762 MYO16Q9Y6X6 1858 aa16.43■□□□□ 0.22
GHDC-209ENST00000588762 RTN3O95197 1032 aaPredicted RBP16.42■□□□□ 0.22
GHDC-209ENST00000588762 SLC34A2O95436 690 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 CALCAP01258 141 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 STAT1P42224 750 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 EPHA5P54756 1037 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 PTPN21Q16825 1174 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 NUP93Q8N1F7 819 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 STKLD1Q8NE28 680 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 ACSF2Q96CM8 615 aaPredicted RBP16.42■□□□□ 0.22
GHDC-209ENST00000588762 TRMT2BQ96GJ1 504 aaKnown RBP16.42■□□□□ 0.22
GHDC-209ENST00000588762 GPR88Q9GZN0 384 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
GHDC-209ENST00000588762 PRKAG3Q9UGI9 489 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.42■□□□□ 0.22
GHDC-209ENST00000588762 NR2E1Q9Y466 385 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 DOCK8Q8NF50 2099 aa16.42■□□□□ 0.22
GHDC-209ENST00000588762 BEST1O76090 585 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 PNMA6AP0CW24 399 aaPredicted RBP16.41■□□□□ 0.22
GHDC-209ENST00000588762 SETSIPP0DME0 302 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 BMP1P13497 986 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
GHDC-209ENST00000588762 CDC25CP30307 473 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 CLCN1P35523 988 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 SOX5P35711 763 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 JAM2P57087 298 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 BST2Q10589 180 aaKnown RBP16.41■□□□□ 0.22
GHDC-209ENST00000588762 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 GET4Q7L5D6 327 aaPredicted RBP16.41■□□□□ 0.22
GHDC-209ENST00000588762 OTOP3Q7RTS5 596 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 TMC8Q8IU68 726 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 ZNF606Q8WXB4 792 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 MYRFLQ96LU7 910 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 LRRC3Q9BY71 257 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 ZNF334Q9HCZ1 680 aaPredicted RBP16.41■□□□□ 0.22
GHDC-209ENST00000588762 PNPLA8Q9NP80 782 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 ANAPC1Q9H1A4 1944 aa16.41■□□□□ 0.22
GHDC-209ENST00000588762 M0QYV0 167 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 GFPT2O94808 682 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 MICAL2O94851 1124 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 GABRR2P28476 465 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 GBP2P32456 591 aaPredicted RBP16.4■□□□□ 0.22
GHDC-209ENST00000588762 KRT9P35527 623 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 PDE6CP51160 858 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 PDE4CQ08493 712 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 IFRD2Q12894 506 aaPredicted RBP16.4■□□□□ 0.22
GHDC-209ENST00000588762 SLC5A9Q2M3M2 681 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 ARHGAP15Q53QZ3 475 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 PRSS36Q5K4E3 855 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 SLC47A2Q86VL8 602 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 TTC30AQ86WT1 665 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 FMNL3Q8IVF7 1028 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 ADHFE1Q8IWW8 467 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 TDRD5Q8NAT2 981 aaKnown RBP16.4■□□□□ 0.22
GHDC-209ENST00000588762 ZMIZ2Q8NF64 920 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 ITFG1Q8TB96 612 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 UBA3Q8TBC4 463 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 RPGRIP1Q96KN7 1286 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 TTLL2Q9BWV7 592 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 EDEM3Q9BZQ6 932 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 UBXN6Q9BZV1 441 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 COMMD8Q9NX08 183 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 USTQ9Y2C2 406 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 UNC80Q8N2C7 3258 aa16.4■□□□□ 0.22
GHDC-209ENST00000588762 A0A1W2PRU2 124 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 TNFRSF10BO14763 440 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 XPO1O14980 1071 aaKnown RBP16.39■□□□□ 0.21
GHDC-209ENST00000588762 CCDC172P0C7W6 258 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
GHDC-209ENST00000588762 YWHAQP27348 245 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 SSTR3P32745 418 aaPredicted RBP16.39■□□□□ 0.21
GHDC-209ENST00000588762 PBX1P40424 430 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 CCR2P41597 374 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 SLC5A3P53794 718 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 MEA1Q16626 185 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 FIGNQ5HY92 759 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 SARM1Q6SZW1 724 aa16.39■□□□□ 0.21
GHDC-209ENST00000588762 TCEAL4Q96EI5 215 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms