RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 RXFP2Q8WXD0 754 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 NCLNQ969V3 563 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 FBXL21Q9UKT6 434 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 A0A087X0T9 212 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 TMEM247A6NEH6 219 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 RNASEH1O60930 286 aaKnown RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 FAM228BP0C875 321 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 PPTC7Q8NI37 304 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 RBM15Q96T37 977 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 PPARGC1AQ9UBK2 798 aaKnown RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 UMODL1Q5DID0 1318 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 LZTS3O60299 673 aaPredicted RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 ACADMP11310 421 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 PTGER2P43116 358 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 ITGA7Q13683 1181 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 USP10Q14694 798 aaKnown RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 LRRC14Q15048 493 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 CLEC16AQ2KHT3 1053 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 REM2Q8IYK8 340 aaPredicted RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 AP4E1Q9UPM8 1137 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 F9P00740 461 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 LAMB3Q13751 1172 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 C1orf186Q6ZWK4 172 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 MTMR14Q8NCE2 650 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 PPP1R2P1Q96PQ5 205 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 FBXO44Q9H4M3 255 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 CYP3A7-CYP3A51PA0A087WV96 503 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 TLL1O43897 1013 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 CYP3A7P24462 503 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 YWHAQP27348 245 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 CAPRIN1Q14444 709 aaKnown RBP18.04■□□□□ 0.48
PTPN21-208ENST00000556564 FIBCD1Q8N539 461 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 ELAC2Q9BQ52 826 aaKnown RBP18.04■□□□□ 0.48
PTPN21-208ENST00000556564 RASSF4Q9H2L5 321 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 TMEM134Q9H6X4 195 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 CRLS1Q9UJA2 301 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 USP18Q9UMW8 372 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 MAP3K13O43283 966 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 DIAPH2O60879 1101 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 AOC2O75106 756 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 SETSIPP0DME0 302 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 PSTPIP1O43586 416 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 BRAFP15056 766 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 RRM1P23921 792 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 KCNA10Q16322 511 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTPN21-208ENST00000556564 ADAM32Q8TC27 787 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 SENP8Q96LD8 212 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 HIPK3Q9H422 1215 aa18.04■□□□□ 0.48
PTPN21-208ENST00000556564 APOBEC2Q9Y235 224 aaKnown RBP18.04■□□□□ 0.48
PTPN21-208ENST00000556564 FARP2O94887 1054 aaPredicted RBP18.04■□□□□ 0.48
PTPN21-208ENST00000556564 MYO1DO94832 1006 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 ITGB5P18084 799 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 NOMO2Q5JPE7 1267 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 CDK5RAP1Q96SZ6 601 aaKnown RBP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 TRIM55Q9BYV6 548 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 RBM12Q9NTZ6 932 aaKnown RBP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 DDHD2O94830 711 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 ZNF518BQ9C0D4 1074 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 TBX4P57082 545 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 CAPSQ13938 189 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 PHLDB3Q6NSJ2 640 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 SPATS2Q86XZ4 545 aaKnown RBP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 HAUS8Q9BT25 410 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 PLA2G6O60733 806 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 SP100P23497 879 aaPredicted RBP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 TFAP2DQ7Z6R9 452 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 SMYD3Q9H7B4 428 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 DMAP1Q9NPF5 467 aaPredicted RBP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 NFICP08651 508 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 USP17L7P0C7H9 530 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 ESRRAP11474 423 aaPredicted RBP18.03■□□□□ 0.48
PTPN21-208ENST00000556564 SNX31Q8N9S9 440 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 PLA2G4CQ9UP65 541 aa18.03■□□□□ 0.48
PTPN21-208ENST00000556564 BAZ2BQ9UIF8 2168 aaKnown RBP18.02■□□□□ 0.48
PTPN21-208ENST00000556564 SYNDIG1LA6NDD5 238 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 ZNF197O14709 1029 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 MYBPC2Q14324 1141 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 C9orf72Q96LT7 481 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 A0A0G2JLL6 359 aaPredicted RBP18.02■□□□□ 0.48
PTPN21-208ENST00000556564 SUPT3HB4E1H0 165 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 SUPT3HO75486 399 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 HSPA8P11142 646 aaKnown RBP18.02■□□□□ 0.48
PTPN21-208ENST00000556564 KCNA2P16389 499 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 TNFSF9P41273 254 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 CRYBB1P53674 252 aaPredicted RBP18.02■□□□□ 0.48
PTPN21-208ENST00000556564 RHOAP61586 193 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 WSCD1Q658N2 575 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 PRRT2Q7Z6L0 340 aaPredicted RBP18.02■□□□□ 0.48
PTPN21-208ENST00000556564 UNC45BQ8IWX7 931 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 SCUBE3Q8IX30 993 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 CD274Q9NZQ7 290 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.48
PTPN21-208ENST00000556564 TTC36A6NLP5 189 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 CHRM3P20309 590 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 GYS2P54840 703 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 DLG4P78352 724 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 CENPCQ03188 943 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms