RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRDM2-213ENST00000503842 MRPL17Q9NRX2 175 aaKnown RBP14.09□□□□□ -0.15
PRDM2-213ENST00000503842 KCND1Q9NSA2 647 aa14.09□□□□□ -0.15
PRDM2-213ENST00000503842 KRT82Q9NSB4 513 aa14.09□□□□□ -0.15
PRDM2-213ENST00000503842 FNIP2Q9P278 1114 aa14.09□□□□□ -0.15
PRDM2-213ENST00000503842 INTUQ9ULD6 942 aa14.09□□□□□ -0.15
PRDM2-213ENST00000503842 SSX2IPQ9Y2D8 614 aa14.09□□□□□ -0.15
PRDM2-213ENST00000503842 PPP2R2CQ9Y2T4 447 aa14.09□□□□□ -0.15
PRDM2-213ENST00000503842 CDY1Q9Y6F8 540 aa14.09□□□□□ -0.15
PRDM2-213ENST00000503842 MTMR11A4FU01 709 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 TULP2O00295 520 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 C2CD2LO14523 706 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 FSCN2O14926 492 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 AP1G2O75843 785 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 VNN2O95498 520 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 H2AFZP0C0S5 128 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 FAM200BP0CF97 657 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 NPR3P17342 541 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 MMP8P22894 467 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 DNAJB1P25685 340 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 NSFP46459 744 aaKnown RBP14.08□□□□□ -0.16
PRDM2-213ENST00000503842 RPL34P49207 117 aaKnown RBP14.08□□□□□ -0.16
PRDM2-213ENST00000503842 GALCP54803 685 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 ROR1Q01973 937 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 CREMQ03060 361 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 MLLT1Q03111 559 aaPredicted RBP14.08□□□□□ -0.16
PRDM2-213ENST00000503842 PDE4CQ08493 712 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 PTP4A2Q12974 167 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 PDCLQ13371 301 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 CFAP221Q4G0U5 840 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 PTPN20Q4JDL3 420 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 ZNF662Q6ZS27 426 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 CLEC20AQ6ZU45 233 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 H2AFVQ71UI9 128 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 MON1BQ7L1V2 547 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 SPATA2LQ8IUW3 424 aaPredicted RBP14.08□□□□□ -0.16
PRDM2-213ENST00000503842 MCOLN2Q8IZK6 566 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 CCAR2Q8N163 923 aaKnown RBP14.08□□□□□ -0.16
PRDM2-213ENST00000503842 STK32AQ8WU08 396 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 POF1BQ8WVV4 589 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 AUTS2Q8WXX7 1259 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 SMARCD1Q96GM5 515 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 SMOQ99835 787 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 PACSIN1Q9BY11 444 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 CSNK1G1Q9HCP0 422 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 ABCB6Q9NP58 842 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 LUC7LQ9NQ29 371 aaKnown RBP14.08□□□□□ -0.16
PRDM2-213ENST00000503842 TMEM30AQ9NV96 361 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 MTUS1Q9ULD2 1270 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 IRAK3Q9Y616 596 aa14.08□□□□□ -0.16
PRDM2-213ENST00000503842 MYH10P35580 1976 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 A0A0U1RQJ8 604 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 WDR27A2RRH5 827 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ANKRD62A6NC57 917 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 H3BNC9 293 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 XPO1O14980 1071 aaKnown RBP14.07□□□□□ -0.16
PRDM2-213ENST00000503842 GRM6O15303 877 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 PJA2O43164 708 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 BEST1O76090 585 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 TMEM253P0C7T8 217 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 CPB1P15086 417 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 BDNFP23560 247 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 OR1D2P34982 312 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ARHGAP25P42331 645 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 MAGEA11P43364 429 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 CDR1P51861 262 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 CACNA2D1P54289 1103 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ARPP19P56211 112 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ERVFC1P60507 584 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
PRDM2-213ENST00000503842 CAMK1Q14012 370 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 RAB33AQ14088 237 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 PPP2R2DQ66LE6 453 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 PMF1Q6P1K2 205 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 KIAA1328Q86T90 577 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ZSCAN30Q86W11 494 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 REXO1L1PQ8IX06 675 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ZMIZ2Q8NF64 920 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 C2orf15Q8WU43 125 aaKnown RBP14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ATRIPQ8WXE1 791 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 RNF166Q96A37 237 aaPredicted RBP14.07□□□□□ -0.16
PRDM2-213ENST00000503842 VCPIP1Q96JH7 1222 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 NOX5Q96PH1 765 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 CPXM1Q96SM3 734 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 RHOBTB2Q9BYZ6 727 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 LACRTQ9GZZ8 138 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 CYLDQ9NQC7 956 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 TLR9Q9NR96 1032 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 ABI2Q9NYB9 513 aaPredicted RBP14.07□□□□□ -0.16
PRDM2-213ENST00000503842 TFR2Q9UP52 801 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
PRDM2-213ENST00000503842 MYO7AQ13402 2215 aa14.06□□□□□ -0.16
PRDM2-213ENST00000503842 FAM170AA1A519 330 aa14.06□□□□□ -0.16
PRDM2-213ENST00000503842 TEX28O15482 410 aa14.06□□□□□ -0.16
PRDM2-213ENST00000503842 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
PRDM2-213ENST00000503842 ABLIM3O94929 683 aa14.06□□□□□ -0.16
PRDM2-213ENST00000503842 CXCL14O95715 111 aa14.06□□□□□ -0.16
PRDM2-213ENST00000503842 CYP2F1P24903 491 aa14.06□□□□□ -0.16
PRDM2-213ENST00000503842 GABRB2P47870 512 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms