RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 HSD3B7Q9H2F3 369 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 LRRC4Q9HBW1 653 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 NLRC4Q9NPP4 1024 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 AVENQ9NQS1 362 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TRPM5Q9NZQ8 1165 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 HMGXB4Q9UGU5 601 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TSPAN16Q9UKR8 245 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 MYO6Q9UM54 1294 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 CNTN6Q9UQ52 1028 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 SLC38A8A6NNN8 435 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 F8VZ95 297 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CLDN5O00501 218 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 DPYSL4O14531 572 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 XPO1O14980 1071 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CYP26A1O43174 497 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SART1O43290 800 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SOAT2O75908 522 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 MICAL2O94851 1124 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 PAPLNO95428 1278 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ABL1P00519 1130 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 FERP16591 822 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ATF6P18850 670 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ACO1P21399 889 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 BRD2P25440 801 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 YWHAQP27348 245 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SSTR3P32745 418 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SOX5P35711 763 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ACADSBP45954 432 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 PSEN1P49768 467 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CDR1P51861 262 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 GOLGA8FQ08AF8 430 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 GOLGA8DPQ0D2H9 430 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 NR1I3Q14994 352 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CNGA2Q16280 664 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 MEA1Q16626 185 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 DDR2Q16832 855 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 FIGNQ5HY92 759 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 PPP1R2P3Q6NXS1 205 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 GJB7Q6PEY0 223 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 LCLAT1Q6UWP7 414 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CLEC20AQ6ZU45 233 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 APTXQ7Z2E3 356 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 VPS36Q86VN1 386 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ZNF677Q86XU0 584 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ADHFE1Q8IWW8 467 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ARHGAP18Q8N392 663 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 TTC9BQ8N6N2 239 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 UBR7Q8N806 425 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ZNF606Q8WXB4 792 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 OVCA2Q8WZ82 227 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SUSD6Q92537 303 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 KAT5Q92993 513 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 FBXO32Q969P5 355 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ZNF707Q96C28 371 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 RPGRIP1Q96KN7 1286 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 MYRFLQ96LU7 910 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CDK5RAP1Q96SZ6 601 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 LPIN3Q9BQK8 851 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 TRIM62Q9BVG3 475 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 UBXN6Q9BZV1 441 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 XPO4Q9C0E2 1151 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 NACA2Q9H009 215 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CRISPLD1Q9H336 500 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ATXN3LQ9H3M9 355 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 POMKQ9H5K3 350 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SYNCQ9H7C4 482 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 CSNK1G1Q9HCP0 422 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SIX2Q9NPC8 291 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 PRDM6Q9NQX0 595 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 TLR8Q9NR97 1041 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ST7Q9NRC1 585 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ZNHIT6Q9NWK9 470 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 GDE1Q9NZC3 331 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 DNMT3BQ9UBC3 853 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 SIK3Q9Y2K2 1263 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 LUC7L2Q9Y383 392 aaKnown RBP6.74□□□□□ -1.33
SF3B1-206ENST00000462613 NME7Q9Y5B8 376 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 ITIH6Q6UXX5 1313 aa6.74□□□□□ -1.33
SF3B1-206ENST00000462613 TRAV19A0A0A6YYK7 116 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 A0A1W2PRU2 124 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 SOBPA7XYQ1 873 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 O00370 1275 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 FOXN3O00409 490 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-206ENST00000462613 TEX33O43247 280 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 GFPT2O94808 682 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 NOL4O94818 638 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 VNN2O95498 520 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 RALAP11233 206 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 IL9P15248 144 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 CYP11B1P15538 503 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 PFKLP17858 780 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 AVPR1AP37288 418 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 PLA2G4AP47712 749 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 KCNQ1P51787 676 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 ZNF132P52740 706 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 SLC5A3P53794 718 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 EPHA5P54756 1037 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms