RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 TRAV19A0A0A6YYK7 116 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 CALUO43852 315 aaPredicted RBP19.67■□□□□ 0.74
NUP50-207ENST00000424634 KINO60870 393 aaKnown RBP19.67■□□□□ 0.74
NUP50-207ENST00000424634 LILRB5O75023 590 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 SATB1Q01826 763 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 FAM160A1Q05DH4 1040 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 KCNB1Q14721 858 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 ZNF667Q5HYK9 610 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 Q6ZS52 159 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 PAQR9Q6ZVX9 377 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 IER2Q9BTL4 223 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 TTLL2Q9BWV7 592 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 C2orf42Q9NWW7 574 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 DCHS1Q96JQ0 3298 aa19.67■□□□□ 0.74
NUP50-207ENST00000424634 IKBKBO14920 756 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 TRIM66O15016 1216 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 AKAP3O75969 853 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 CKMP06732 381 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 USP17L7P0C7H9 530 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 HDCP19113 662 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 ANXA13P27216 316 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 NOP14P78316 857 aaKnown RBP19.66■□□□□ 0.74
NUP50-207ENST00000424634 ZXDBP98169 803 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 CCINQ13939 588 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 ZNF77Q15935 545 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 NFIL3Q16649 462 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 SGSM1Q2NKQ1 1148 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 SCARA5Q6ZMJ2 495 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 GUF1Q8N442 669 aaKnown RBP19.66■□□□□ 0.74
NUP50-207ENST00000424634 ATRIPQ8WXE1 791 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 CCDC47Q96A33 483 aaKnown RBP19.66■□□□□ 0.74
NUP50-207ENST00000424634 FRMD4BQ9Y2L6 1034 aa19.66■□□□□ 0.74
NUP50-207ENST00000424634 HELZP42694 1942 aaKnown RBP19.66■□□□□ 0.74
NUP50-207ENST00000424634 ZNF840PA6NDX5 716 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 MAPK13O15264 365 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 NR2F2P24468 414 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 HOXC13P31276 330 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 CXCL12P48061 93 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 CCR3P51677 355 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 VAMP7P51809 220 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 LRRC32Q14392 662 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 MTF1Q14872 753 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 DGKKQ5KSL6 1271 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 SPOPLQ6IQ16 392 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 FMR1NBQ8N0W7 255 aaPredicted RBP19.65■□□□□ 0.74
NUP50-207ENST00000424634 SPEM1Q8N4L4 309 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 DCLK2Q8N568 766 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 KCNK16Q96T55 309 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 ELOVL4Q9GZR5 314 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 RNF38Q9H0F5 515 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 FBRSL1Q9HCM7 1045 aaKnown RBP19.65■□□□□ 0.74
NUP50-207ENST00000424634 TRPM5Q9NZQ8 1165 aa19.65■□□□□ 0.74
NUP50-207ENST00000424634 KIF20AO95235 890 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 ASS1P00966 412 aaKnown RBP19.64■□□□□ 0.73
NUP50-207ENST00000424634 HLA-DRAP01903 254 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 PPP3CAQ08209 521 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 TAF10Q12962 218 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 USP4Q13107 963 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 PNOCQ13519 176 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 ZCWPW2Q504Y3 356 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 NAIF1Q69YI7 327 aaPredicted RBP19.64■□□□□ 0.73
NUP50-207ENST00000424634 CC2D1AQ6P1N0 951 aaPredicted RBP19.64■□□□□ 0.73
NUP50-207ENST00000424634 SMYD4Q8IYR2 804 aaPredicted RBP19.64■□□□□ 0.73
NUP50-207ENST00000424634 TTC16Q8NEE8 873 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 SH3RF2Q8TEC5 729 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 OSCP1Q8WVF1 389 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 FAM126AQ9BYI3 521 aaPredicted RBP19.64■□□□□ 0.73
NUP50-207ENST00000424634 LINC00597Q9H2U6 94 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.64■□□□□ 0.73
NUP50-207ENST00000424634 DUS2Q9NX74 493 aaKnown RBP19.64■□□□□ 0.73
NUP50-207ENST00000424634 HMGXB4Q9UGU5 601 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 WNT6Q9Y6F9 365 aa19.64■□□□□ 0.73
NUP50-207ENST00000424634 TRDMT1O14717 391 aaKnown RBP19.63■□□□□ 0.73
NUP50-207ENST00000424634 TRIM49P0CI25 452 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 TRIM49CP0CI26 452 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 DMWDQ09019 674 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 ORC1Q13415 861 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 ADAM9Q13443 819 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 BECN1Q14457 450 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 PDGFRLQ15198 375 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 TMEM196Q5HYL7 178 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 FSTL4Q6MZW2 842 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 ACOT1Q86TX2 421 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 FUKQ8N0W3 1084 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 ENGASEQ8NFI3 743 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 TAF4BQ92750 862 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 ECT2Q9H8V3 914 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 ARHGAP26Q9UNA1 814 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 MYH10P35580 1976 aa19.63■□□□□ 0.73
NUP50-207ENST00000424634 K7ESF4 209 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 TNFRSF10BO14763 440 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 CLSTN1O94985 981 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 TCF3P15923 654 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 GJA4P35212 333 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 ASPAP45381 313 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 GCLMP48507 274 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 GALK1P51570 392 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 NDST1P52848 882 aa19.62■□□□□ 0.73
NUP50-207ENST00000424634 MCCD1P59942 119 aaPredicted RBP19.62■□□□□ 0.73
NUP50-207ENST00000424634 EML3Q32P44 896 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms