RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 PPP3CCP48454 512 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 DHPSP49366 369 aaPredicted RBP16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 CASP5P51878 434 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 CCDC142Q17RM4 750 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 SPATA17Q96L03 361 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 CEP295NLQ96MC4 621 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 FNBP1Q96RU3 617 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 PKMYT1Q99640 499 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 LINC00597Q9H2U6 94 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 KIAA1586Q9HCI6 787 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 TMEM9BQ9NQ34 198 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
SBDSP1-201ENST00000415772 LEFTY2O00292 366 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 TM4SF5O14894 197 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 TNNI1P19237 187 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 TNNC1P63316 161 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 MDH1BQ5I0G3 518 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 TDRD10Q5VZ19 366 aaKnown RBP16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 FAM171BQ6P995 826 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 PGBD3Q8N328 593 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 CCDC33Q8N5R6 958 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 PDILTQ8N807 584 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 OR6B3Q8NGW1 331 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 FAM84AQ96KN4 292 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 POLMQ9NP87 494 aaPredicted RBP16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 SIX4Q9UIU6 781 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 MMP17Q9ULZ9 603 aa16.62■□□□□ 0.25
SBDSP1-201ENST00000415772 APODP05090 189 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 DLATP10515 647 aaKnown RBP16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 TCF3P15923 654 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 LMO2P25791 158 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 GNL1P36915 607 aaPredicted RBP16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 MRPS21P82921 87 aaKnown RBP16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 SHC2P98077 582 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 ZNF252P-AS1Q0IIN9 211 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 RESTQ13127 1097 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 UAP1L1Q3KQV9 507 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 PMS2CLQ68D20 193 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 FILIP1Q7Z7B0 1213 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 DDX42Q86XP3 938 aaKnown RBP eCLIP16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 USP33Q8TEY7 942 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 EZH1Q92800 747 aaPredicted RBP16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 PNKPQ96T60 521 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 SMPD4Q9NXE4 827 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 CPQQ9Y646 472 aa16.61■□□□□ 0.25
SBDSP1-201ENST00000415772 ADH1CP00326 375 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 MBL2P11226 248 aaPredicted RBP16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 SYT1P21579 422 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 WARSP23381 471 aaKnown RBP16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 AMPD3Q01432 767 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 FOXC1Q12948 553 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 TRPC3Q13507 836 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 BTBD8Q5XKL5 378 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 NUDT18Q6ZVK8 323 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 LPCAT2Q7L5N7 544 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 RDH13Q8NBN7 331 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 OR5B17Q8NGF7 314 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 MYCBPAPQ8TBZ2 947 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 KBTBD7Q8WVZ9 684 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 PIGKQ92643 395 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 PCED1BQ96HM7 432 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 NUSAP1Q9BXS6 441 aaKnown RBP16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 CRTAC1Q9NQ79 661 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 HSPBP1Q9NZL4 362 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 ATP8B3O60423 1300 aa16.6■□□□□ 0.25
SBDSP1-201ENST00000415772 LNP1A1A4G5 178 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 F8VP50 259 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 ZBTB24O43167 697 aaPredicted RBP16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 PHACTR2O75167 634 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 CYP17A1P05093 508 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 TIE1P35590 1138 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 OPRD1P41143 372 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 STK38Q15208 465 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 CRY1Q16526 586 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 EOGTQ5NDL2 527 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 SH3PXD2AQ5TCZ1 1133 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 FAM173BQ6P4H8 233 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 TRAPPC11Q7Z392 1133 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 CBWD2Q8IUF1 395 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 PDZD8Q8NEN9 1154 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 WHAMMQ8TF30 809 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 ELOVL4Q9GZR5 314 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 NACA2Q9H009 215 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 ZSCAN16Q9H4T2 348 aaPredicted RBP16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 ARHGEF4Q9NR80 690 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 CFAP97Q9P2B7 532 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 TBC1D14Q9P2M4 693 aa16.59■□□□□ 0.25
SBDSP1-201ENST00000415772 FRMD3A2A2Y4 597 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 ZNF840PA6NDX5 716 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 A8MXQ7 604 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 K7EQS6 105 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms