RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 YDR381C-AQ3E6R5 114 aa-2.86□□□□□ -2.87
snR56snR56 QCR10P37299 77 aa-2.87□□□□□ -2.87
snR56snR56 SDH7Q04401 133 aa-2.87□□□□□ -2.87
snR56snR56 YCL048W-AQ2V2Q2 79 aa-2.87□□□□□ -2.87
snR56snR56 TOP2P06786 1428 aaKnown RBP-2.87□□□□□ -2.87
snR56snR56 DYN1P36022 4092 aa-2.88□□□□□ -2.87
snR56snR56 CMD1P06787 147 aaKnown RBP-2.88□□□□□ -2.87
snR56snR56 HSP12P22943 109 aaKnown RBP-2.88□□□□□ -2.87
snR56snR56 MPC2P38857 129 aa-2.88□□□□□ -2.87
snR56snR56 YLR285C-AQ3E771 56 aa-2.88□□□□□ -2.87
snR56snR56 HSP10P38910 106 aa-2.89□□□□□ -2.87
snR56snR56 QCR2P07257 368 aa-2.9□□□□□ -2.87
snR56snR56 YKL044WP36092 106 aa-2.9□□□□□ -2.87
snR56snR56 LSM8P47093 109 aaKnown RBP-2.9□□□□□ -2.87
snR56snR56 YDR476CQ03362 224 aa-2.91□□□□□ -2.88
snR56snR56 YJL197C-AP0C5P0 93 aa-2.92□□□□□ -2.88
snR56snR56 CYB5P40312 120 aa-2.92□□□□□ -2.88
snR56snR56 YGR201CP42936 225 aa-2.92□□□□□ -2.88
snR56snR56 YPR202WQ08993 238 aa-2.92□□□□□ -2.88
snR56snR56 APQ12P40532 138 aa-2.93□□□□□ -2.88
snR56snR56 YGR025WP53216 100 aa-2.93□□□□□ -2.88
snR56snR56 YLR050CQ12155 161 aaKnown RBP-2.93□□□□□ -2.88
snR56snR56 YOR097CQ12274 175 aaPredicted RBP-2.94□□□□□ -2.88
snR56snR56 TRM732Q03496 1420 aa-2.94□□□□□ -2.88
snR56snR56 YJR107C-AP0CT86 78 aa-2.95□□□□□ -2.88
snR56snR56 RPC19P28000 142 aaKnown RBP-2.96□□□□□ -2.88
snR56snR56 EFG1Q3E705 233 aaKnown RBP-2.96□□□□□ -2.88
snR56snR56 GCN1P33892 2672 aaKnown RBP-2.96□□□□□ -2.88
snR56snR56 MRPL38P35996 138 aaPredicted RBP-2.97□□□□□ -2.88
snR56snR56 PAM16P42949 149 aa-2.97□□□□□ -2.88
snR56snR56 YIL014C-AQ02598 104 aa-2.97□□□□□ -2.88
snR56snR56 PET54P10834 293 aa-2.99□□□□□ -2.89
snR56snR56 YDR210WQ03482 75 aa-2.99□□□□□ -2.89
snR56snR56 NSL1Q12143 216 aa-2.99□□□□□ -2.89
snR56snR56 DNA2P38859 1522 aa-2.99□□□□□ -2.89
snR56snR56 RPL35AP0CX84 120 aaKnown RBP-3□□□□□ -2.89
snR56snR56 RPL35BP0CX85 120 aaKnown RBP-3□□□□□ -2.89
snR56snR56 RAD50P12753 1312 aa-3□□□□□ -2.89
snR56snR56 SUI1P32911 108 aaKnown RBP-3.01□□□□□ -2.89
snR56snR56 YIP3P53633 176 aa-3.01□□□□□ -2.89
snR56snR56 SEC59P20048 519 aa-3.02□□□□□ -2.89
snR56snR56 YLR118CQ12354 227 aa-3.02□□□□□ -2.89
snR56snR56 SLO1Q3E784 85 aa-3.02□□□□□ -2.89
snR56snR56 RPB4P20433 221 aaPredicted RBP-3.04□□□□□ -2.9
snR56snR56 IMP2P46972 177 aa-3.04□□□□□ -2.9
snR56snR56 YPL261CQ08976 102 aa-3.04□□□□□ -2.9
snR56snR56 RPL14AP36105 138 aaKnown RBP-3.05□□□□□ -2.9
snR56snR56 YGR042WP53227 271 aa-3.05□□□□□ -2.9
snR56snR56 MAK3Q03503 176 aa-3.05□□□□□ -2.9
snR56snR56 YCR101CP25607 182 aa-3.06□□□□□ -2.9
snR56snR56 YCR050CP25630 102 aa-3.06□□□□□ -2.9
snR56snR56 DER1P38307 211 aa-3.06□□□□□ -2.9
snR56snR56 YLR363W-AQ3E747 85 aa-3.06□□□□□ -2.9
snR56snR56 YRF1-1P0CX20 1796 aa-3.07□□□□□ -2.9
snR56snR56 YRF1-5P0CX21 1796 aa-3.07□□□□□ -2.9
snR56snR56 YRF1-8P0CX22 1796 aa-3.07□□□□□ -2.9
snR56snR56 AIM11P87275 137 aa-3.07□□□□□ -2.9
snR56snR56 PBI2P0CT04 75 aaKnown RBP-3.08□□□□□ -2.9
snR56snR56 RPL38P49167 78 aaKnown RBP-3.08□□□□□ -2.9
snR56snR56 YMR001C-AQ8TGS9 76 aa-3.08□□□□□ -2.9
snR56snR56 RPS28BP0C0X0 67 aaKnown RBP-3.09□□□□□ -2.9
snR56snR56 HMRA2P0CY13 119 aa-3.09□□□□□ -2.9
snR56snR56 SSN2P38931 1420 aa-3.1□□□□□ -2.91
snR56snR56 ECM12O13529 151 aa-3.1□□□□□ -2.91
snR56snR56 ATP7P30902 174 aa-3.1□□□□□ -2.91
snR56snR56 YKT6P36015 200 aaKnown RBP-3.1□□□□□ -2.91
snR56snR56 TRS20P38334 175 aa-3.1□□□□□ -2.91
snR56snR56 YIR020CP40575 100 aa-3.1□□□□□ -2.91
snR56snR56 CNL1Q06333 122 aa-3.1□□□□□ -2.91
snR56snR56 JIP3O13555 125 aa-3.11□□□□□ -2.91
snR56snR56 RSM18P40033 138 aa-3.11□□□□□ -2.91
snR56snR56 ERV14P53173 138 aa-3.11□□□□□ -2.91
snR56snR56 PAU12P53343 120 aa-3.11□□□□□ -2.91
snR56snR56 YHR050W-AQ05451 56 aa-3.11□□□□□ -2.91
snR56snR56 PDX3P38075 228 aaKnown RBP-3.12□□□□□ -2.91
snR56snR56 YBL044WP38194 122 aa-3.12□□□□□ -2.91
snR56snR56 RPS28AQ3E7X9 67 aaPredicted RBP-3.12□□□□□ -2.91
snR56snR56 YLR053CQ12026 108 aa-3.13□□□□□ -2.91
snR56snR56 YPL038W-AQ3E7B4 63 aa-3.13□□□□□ -2.91
snR56snR56 PCC1Q3E833 88 aa-3.13□□□□□ -2.91
snR56snR56 BPH1P25356 2167 aa-3.13□□□□□ -2.91
snR56snR56 MEC1P38111 2368 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-DR5P0C2I2 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-DR6P0C2I3 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-LR2P0C2I5 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-PR1P0C2I9 1755 aaKnown RBP-3.14□□□□□ -2.91
snR56snR56 TY1B-PR2P0C2J0 1756 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-JR1P47098 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-JR2P47100 1755 aaKnown RBP-3.14□□□□□ -2.91
snR56snR56 TY1B-ML2Q03434 1755 aaKnown RBP-3.14□□□□□ -2.91
snR56snR56 TY1B-ER1Q03612 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-DR1Q03855 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-MR2Q04670 1755 aaKnown RBP-3.14□□□□□ -2.91
snR56snR56 TY1B-ML1Q04711 1755 aaKnown RBP-3.14□□□□□ -2.91
snR56snR56 TY1B-GR1Q12141 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-GR2Q12269 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-OLQ12273 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-PLQ12414 1755 aaKnown RBP-3.14□□□□□ -2.91
snR56snR56 TY1B-ORQ92393 1755 aa-3.14□□□□□ -2.91
snR56snR56 TY1B-DR3Q99231 1755 aa-3.14□□□□□ -2.91
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms