RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 PBI2P0CT04 75 aaKnown RBP-2.4□□□□□ -2.79
snR48snR48 RPL35AP0CX84 120 aaKnown RBP-2.4□□□□□ -2.79
snR48snR48 RPL35BP0CX85 120 aaKnown RBP-2.4□□□□□ -2.79
snR48snR48 YCL048W-AQ2V2Q2 79 aa-2.4□□□□□ -2.79
snR48snR48 PKR1Q03880 122 aaKnown RBP-2.41□□□□□ -2.8
snR48snR48 YIL134C-AQ45U18 67 aa-2.41□□□□□ -2.8
snR48snR48 YJL197C-AP0C5P0 93 aa-2.42□□□□□ -2.8
snR48snR48 YLR285C-AQ3E771 56 aa-2.42□□□□□ -2.8
snR48snR48 PMD1P32634 1753 aa-2.43□□□□□ -2.8
snR48snR48 SUI1P32911 108 aaKnown RBP-2.44□□□□□ -2.8
snR48snR48 RPS29AP41057 56 aaKnown RBP-2.44□□□□□ -2.8
snR48snR48 NSL1Q12143 216 aa-2.44□□□□□ -2.8
snR48snR48 HYM1P32464 399 aa-2.45□□□□□ -2.8
snR48snR48 MPC2P38857 129 aa-2.45□□□□□ -2.8
snR48snR48 CYB5P40312 120 aa-2.45□□□□□ -2.8
snR48snR48 YLR053CQ12026 108 aa-2.45□□□□□ -2.8
snR48snR48 TOP2P06786 1428 aaKnown RBP-2.46□□□□□ -2.8
snR48snR48 RPC10P40422 70 aa-2.47□□□□□ -2.8
snR48snR48 TRM732Q03496 1420 aa-2.48□□□□□ -2.81
snR48snR48 RPC19P28000 142 aaKnown RBP-2.48□□□□□ -2.81
snR48snR48 YKL044WP36092 106 aa-2.48□□□□□ -2.81
snR48snR48 YDR246W-AQ3E763 66 aa-2.48□□□□□ -2.81
snR48snR48 YIL014C-AQ02598 104 aa-2.49□□□□□ -2.81
snR48snR48 SLO1Q3E784 85 aa-2.49□□□□□ -2.81
snR48snR48 COX23P38824 151 aa-2.5□□□□□ -2.81
snR48snR48 PET54P10834 293 aa-2.51□□□□□ -2.81
snR48snR48 YCR050CP25630 102 aa-2.51□□□□□ -2.81
snR48snR48 YRF1-2P40105 1681 aa-2.51□□□□□ -2.81
snR48snR48 TOR1P35169 2470 aa-2.51□□□□□ -2.81
snR48snR48 TY1B-BLQ12490 1755 aa-2.51□□□□□ -2.81
snR48snR48 CAT8P39113 1433 aa-2.51□□□□□ -2.81
snR48snR48 YDR381C-AQ3E6R5 114 aa-2.54□□□□□ -2.82
snR48snR48 YLR363W-AQ3E747 85 aa-2.54□□□□□ -2.82
snR48snR48 RPS28BP0C0X0 67 aaKnown RBP-2.55□□□□□ -2.82
snR48snR48 ARC19P33204 171 aaKnown RBP-2.55□□□□□ -2.82
snR48snR48 TIM11P81449 96 aaPredicted RBP-2.55□□□□□ -2.82
snR48snR48 RPS28AQ3E7X9 67 aaPredicted RBP-2.55□□□□□ -2.82
snR48snR48 TY1B-LR3P0C2I6 1755 aaKnown RBP-2.56□□□□□ -2.82
snR48snR48 TY1B-PR3P0C2J1 1755 aaKnown RBP-2.56□□□□□ -2.82
snR48snR48 ERV14P53173 138 aa-2.56□□□□□ -2.82
snR48snR48 RAD50P12753 1312 aa-2.57□□□□□ -2.82
snR48snR48 PAM16P42949 149 aa-2.57□□□□□ -2.82
snR48snR48 YGR025WP53216 100 aa-2.57□□□□□ -2.82
snR48snR48 YGR042WP53227 271 aa-2.57□□□□□ -2.82
snR48snR48 CWC21Q03375 135 aaKnown RBP-2.57□□□□□ -2.82
snR48snR48 YOR097CQ12274 175 aaPredicted RBP-2.57□□□□□ -2.82
snR48snR48 DNA2P38859 1522 aa-2.58□□□□□ -2.82
snR48snR48 YJR107C-AP0CT86 78 aa-2.58□□□□□ -2.82
snR48snR48 RPL14AP36105 138 aaKnown RBP-2.58□□□□□ -2.82
snR48snR48 DER1P38307 211 aa-2.58□□□□□ -2.82
snR48snR48 YDR210WQ03482 75 aa-2.58□□□□□ -2.82
snR48snR48 CNL1Q06333 122 aa-2.58□□□□□ -2.82
snR48snR48 SEC59P20048 519 aa-2.59□□□□□ -2.82
snR48snR48 IMP2P46972 177 aa-2.59□□□□□ -2.82
snR48snR48 SPC3Q12133 184 aa-2.59□□□□□ -2.82
snR48snR48 MPC1P53157 130 aaKnown RBP-2.6□□□□□ -2.83
snR48snR48 YDR366CP87287 132 aa-2.6□□□□□ -2.83
snR48snR48 YCR101CP25607 182 aa-2.61□□□□□ -2.83
snR48snR48 MRPL38P35996 138 aaPredicted RBP-2.62□□□□□ -2.83
snR48snR48 HMRA2P0CY13 119 aa-2.63□□□□□ -2.83
snR48snR48 YIR020CP40575 100 aa-2.63□□□□□ -2.83
snR48snR48 OST5Q92316 86 aa-2.63□□□□□ -2.83
snR48snR48 YPR117WQ06116 2489 aa-2.64□□□□□ -2.83
snR48snR48 TRS20P38334 175 aa-2.64□□□□□ -2.83
snR48snR48 PAU12P53343 120 aa-2.64□□□□□ -2.83
snR48snR48 ELC1Q03071 99 aa-2.64□□□□□ -2.83
snR48snR48 YPL261CQ08976 102 aa-2.64□□□□□ -2.83
snR48snR48 PCC1Q3E833 88 aa-2.64□□□□□ -2.83
snR48snR48 AIM11P87275 137 aa-2.65□□□□□ -2.83
snR48snR48 GIM3P53900 129 aa-2.66□□□□□ -2.84
snR48snR48 RPL22BP56628 122 aaKnown RBP-2.66□□□□□ -2.84
snR48snR48 GPI19Q04082 140 aa-2.66□□□□□ -2.84
snR48snR48 HKR1P41809 1802 aa-2.66□□□□□ -2.84
snR48snR48 ACP1P32463 125 aa-2.67□□□□□ -2.84
snR48snR48 RPL14BP38754 138 aaKnown RBP-2.67□□□□□ -2.84
snR48snR48 VPS51P36116 164 aa-2.68□□□□□ -2.84
snR48snR48 RPL38P49167 78 aaKnown RBP-2.68□□□□□ -2.84
snR48snR48 YGR039WP53225 103 aa-2.68□□□□□ -2.84
snR48snR48 YOL118CQ08259 102 aa-2.68□□□□□ -2.84
snR48snR48 YLR118CQ12354 227 aa-2.68□□□□□ -2.84
snR48snR48 YPL038W-AQ3E7B4 63 aa-2.68□□□□□ -2.84
snR48snR48 SSN2P38931 1420 aa-2.68□□□□□ -2.84
snR48snR48 LSM6Q06406 86 aaKnown RBP-2.69□□□□□ -2.84
snR48snR48 YBR292CP38357 123 aa-2.7□□□□□ -2.84
snR48snR48 RSM18P40033 138 aa-2.7□□□□□ -2.84
snR48snR48 COX12Q01519 83 aa-2.7□□□□□ -2.84
snR48snR48 GIM5Q04493 163 aa-2.7□□□□□ -2.84
snR48snR48 YMR320WQ04897 101 aa-2.7□□□□□ -2.84
snR48snR48 PDX3P38075 228 aaKnown RBP-2.71□□□□□ -2.84
snR48snR48 AME1P38313 324 aa-2.71□□□□□ -2.84
snR48snR48 SNN1P48232 102 aa-2.71□□□□□ -2.84
snR48snR48 TVP18Q04767 167 aa-2.71□□□□□ -2.84
snR48snR48 PAU24P38155 120 aa-2.73□□□□□ -2.85
snR48snR48 ICY1Q04329 127 aa-2.73□□□□□ -2.85
snR48snR48 FMP27Q06179 2628 aa-2.73□□□□□ -2.85
snR48snR48 YHR130CP38834 111 aa-2.74□□□□□ -2.85
snR48snR48 MRX7P53869 86 aa-2.74□□□□□ -2.85
snR48snR48 FRQ1Q06389 190 aa-2.75□□□□□ -2.85
snR48snR48 SNF11P38956 169 aa-2.76□□□□□ -2.85
snR48snR48 YER187WP40102 141 aa-2.77□□□□□ -2.85
Retrieved 100 of 5,963 RNA–protein pairs in 90 ms