RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 TY2B-DR1Q12472 1770 aa-4.83□□□□□ -3.18
snR40snR40 TY2B-BQ12491 1770 aa-4.83□□□□□ -3.18
snR40snR40 TY2B-OR2Q12501 1770 aa-4.83□□□□□ -3.18
snR40snR40 YKL102CP34249 101 aa-4.83□□□□□ -3.18
snR40snR40 PAM16P42949 149 aa-4.83□□□□□ -3.18
snR40snR40 SOM1Q05676 74 aa-4.83□□□□□ -3.18
snR40snR40 SPO14P36126 1683 aa-4.83□□□□□ -3.18
snR40snR40 PAU21P0CE86 164 aa-4.84□□□□□ -3.18
snR40snR40 PAU22P0CE87 164 aa-4.84□□□□□ -3.18
snR40snR40 MRPL37P36532 105 aa-4.84□□□□□ -3.18
snR40snR40 YER187WP40102 141 aa-4.84□□□□□ -3.18
snR40snR40 YLR285C-AQ3E771 56 aa-4.84□□□□□ -3.18
snR40snR40 CYB5P40312 120 aa-4.85□□□□□ -3.19
snR40snR40 RCF1Q03713 159 aa-4.85□□□□□ -3.19
snR40snR40 RPL36BO14455 100 aaKnown RBP-4.86□□□□□ -3.19
snR40snR40 RPL36AP05745 100 aaPredicted RBP-4.86□□□□□ -3.19
snR40snR40 YUH1P35127 236 aa-4.86□□□□□ -3.19
snR40snR40 TMA20P89886 181 aaPredicted RBP-4.86□□□□□ -3.19
snR40snR40 GRX8Q05926 109 aa-4.86□□□□□ -3.19
snR40snR40 HTB1P02293 131 aaKnown RBP-4.87□□□□□ -3.19
snR40snR40 HTB2P02294 131 aa-4.87□□□□□ -3.19
snR40snR40 AHC2P25649 128 aa-4.87□□□□□ -3.19
snR40snR40 YKL183C-AQ3E765 70 aa-4.87□□□□□ -3.19
snR40snR40 IKI1P38874 309 aa-4.88□□□□□ -3.19
snR40snR40 YLR042CQ07990 161 aa-4.88□□□□□ -3.19
snR40snR40 RAD50P12753 1312 aa-4.89□□□□□ -3.19
snR40snR40 YBR121C-AP0C5L4 52 aa-4.89□□□□□ -3.19
snR40snR40 YKR041WP36134 250 aa-4.89□□□□□ -3.19
snR40snR40 RTC3P38804 111 aaPredicted RBP-4.89□□□□□ -3.19
snR40snR40 EGD2P38879 174 aaKnown RBP-4.89□□□□□ -3.19
snR40snR40 RAF1Q06891 181 aa-4.89□□□□□ -3.19
snR40snR40 MATALPHA1P0CY06 175 aa-4.9□□□□□ -3.19
snR40snR40 HMLALPHA1P0CY07 175 aa-4.9□□□□□ -3.19
snR40snR40 TRX1P22217 103 aaKnown RBP-4.9□□□□□ -3.19
snR40snR40 NOC4Q06512 552 aaPredicted RBP-4.9□□□□□ -3.19
snR40snR40 YDL085C-AQ3E7B7 68 aaKnown RBP-4.9□□□□□ -3.19
snR40snR40 TY1B-ER2Q03619 1755 aa-4.91□□□□□ -3.19
snR40snR40 TY1B-MR1Q04214 1755 aa-4.91□□□□□ -3.19
snR40snR40 TY1B-LR1Q12088 1755 aaKnown RBP-4.91□□□□□ -3.19
snR40snR40 TY1B-NL1Q12112 1755 aa-4.91□□□□□ -3.19
snR40snR40 TY1B-GR3Q12316 1755 aa-4.91□□□□□ -3.19
snR40snR40 YET3Q07451 203 aa-4.91□□□□□ -3.2
snR40snR40 MRPL44P19956 98 aa-4.92□□□□□ -3.2
snR40snR40 RPC19P28000 142 aaKnown RBP-4.92□□□□□ -3.2
snR40snR40 FMP32P43557 207 aa-4.92□□□□□ -3.2
snR40snR40 NUM1Q00402 2748 aa-4.92□□□□□ -3.2
snR40snR40 PET54P10834 293 aa-4.93□□□□□ -3.2
snR40snR40 NVJ1P38881 321 aa-4.93□□□□□ -3.2
snR40snR40 AIM11P87275 137 aa-4.93□□□□□ -3.2
snR40snR40 DDP1Q99321 188 aaKnown RBP-4.93□□□□□ -3.2
snR40snR40 BUD4P47136 1447 aa-4.94□□□□□ -3.2
snR40snR40 TAH1P25638 111 aaPredicted RBP-4.94□□□□□ -3.2
snR40snR40 YNL140CP53910 189 aa-4.94□□□□□ -3.2
snR40snR40 ATP5P09457 212 aa-4.95□□□□□ -3.2
snR40snR40 HSP10P38910 106 aa-4.96□□□□□ -3.2
snR40snR40 MIX14Q04341 121 aa-4.96□□□□□ -3.2
snR40snR40 ECM29P38737 1868 aa-4.96□□□□□ -3.2
snR40snR40 TY1B-NL2Q99337 1749 aaKnown RBP-4.97□□□□□ -3.2
snR40snR40 YCR101CP25607 182 aa-4.97□□□□□ -3.21
snR40snR40 HPT1Q04178 221 aaKnown RBP-4.97□□□□□ -3.21
snR40snR40 RSM18P40033 138 aa-4.98□□□□□ -3.21
snR40snR40 YDR182W-AQ3E796 67 aa-4.98□□□□□ -3.21
snR40snR40 YKT6P36015 200 aaKnown RBP-4.99□□□□□ -3.21
snR40snR40 DNA2P38859 1522 aa-5□□□□□ -3.21
snR40snR40 TRX3P25372 127 aa-5□□□□□ -3.21
snR40snR40 IMP2P46972 177 aa-5□□□□□ -3.21
snR40snR40 ORM1P53224 222 aa-5□□□□□ -3.21
snR40snR40 RFA3P26755 122 aaKnown RBP-5.01□□□□□ -3.21
snR40snR40 RAD17P48581 401 aa-5.01□□□□□ -3.21
snR40snR40 TRS20P38334 175 aa-5.03□□□□□ -3.21
snR40snR40 YIL014C-AQ02598 104 aa-5.03□□□□□ -3.21
snR40snR40 SDH7Q04401 133 aa-5.03□□□□□ -3.21
snR40snR40 QCR10P37299 77 aa-5.04□□□□□ -3.22
snR40snR40 RPL14AP36105 138 aaKnown RBP-5.05□□□□□ -3.22
snR40snR40 YDR210WQ03482 75 aa-5.06□□□□□ -3.22
snR40snR40 NCB2Q92317 146 aa-5.06□□□□□ -3.22
snR40snR40 NTE1Q04958 1679 aa-5.08□□□□□ -3.22
snR40snR40 YBR292CP38357 123 aa-5.08□□□□□ -3.22
snR40snR40 LSM1P47017 172 aaKnown RBP-5.08□□□□□ -3.22
snR40snR40 ERV25P54837 211 aaKnown RBP-5.08□□□□□ -3.22
snR40snR40 YLR363W-AQ3E747 85 aa-5.08□□□□□ -3.22
snR40snR40 YPL038W-AQ3E7B4 63 aa-5.08□□□□□ -3.22
snR40snR40 STF1P01098 86 aa-5.09□□□□□ -3.22
snR40snR40 HMRA2P0CY13 119 aa-5.09□□□□□ -3.22
snR40snR40 SNF11P38956 169 aa-5.09□□□□□ -3.22
snR40snR40 HUR1P45820 110 aa-5.09□□□□□ -3.22
snR40snR40 LSM8P47093 109 aaKnown RBP-5.09□□□□□ -3.22
snR40snR40 YJL197C-AP0C5P0 93 aa-5.1□□□□□ -3.23
snR40snR40 PET117Q02771 107 aa-5.1□□□□□ -3.23
snR40snR40 YLR050CQ12155 161 aaKnown RBP-5.1□□□□□ -3.23
snR40snR40 COX7P10174 60 aa-5.11□□□□□ -3.23
snR40snR40 YGR042WP53227 271 aa-5.11□□□□□ -3.23
snR40snR40 MRX7P53869 86 aa-5.11□□□□□ -3.23
snR40snR40 ICY1Q04329 127 aa-5.11□□□□□ -3.23
snR40snR40 YGL204CP53089 101 aa-5.12□□□□□ -3.23
snR40snR40 YPD1Q07688 167 aa-5.12□□□□□ -3.23
snR40snR40 YOR008C-AQ3E7B9 74 aa-5.12□□□□□ -3.23
snR40snR40 TRM732Q03496 1420 aa-5.13□□□□□ -3.23
snR40snR40 DER1P38307 211 aa-5.13□□□□□ -3.23
snR40snR40 YER181CP40097 107 aa-5.13□□□□□ -3.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms