RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B CMD1P06787 147 aaKnown RBP-1.8□□□□□ -2.7
snR39BsnR39B HAP3P13434 144 aa-1.8□□□□□ -2.7
snR39BsnR39B YAP3P38749 330 aa-1.8□□□□□ -2.7
snR39BsnR39B RAV2Q03956 351 aa-1.8□□□□□ -2.7
snR39BsnR39B HKR1P41809 1802 aa-1.81□□□□□ -2.7
snR39BsnR39B RPS11AP0CX47 156 aaKnown RBP-1.81□□□□□ -2.7
snR39BsnR39B RPS11BP0CX48 156 aaKnown RBP-1.81□□□□□ -2.7
snR39BsnR39B MOG1P47123 218 aa-1.81□□□□□ -2.7
snR39BsnR39B YPD1Q07688 167 aa-1.81□□□□□ -2.7
snR39BsnR39B ECM5Q03214 1411 aa-1.82□□□□□ -2.7
snR39BsnR39B CUP1-1P0CX80 61 aa-1.82□□□□□ -2.7
snR39BsnR39B CUP1-2P0CX81 61 aa-1.82□□□□□ -2.7
snR39BsnR39B MRPL44P19956 98 aa-1.82□□□□□ -2.7
snR39BsnR39B HSP12P22943 109 aaKnown RBP-1.82□□□□□ -2.7
snR39BsnR39B YGR201CP42936 225 aa-1.82□□□□□ -2.7
snR39BsnR39B SHU1P38751 150 aa-1.83□□□□□ -2.7
snR39BsnR39B TY1B-LR3P0C2I6 1755 aaKnown RBP-1.84□□□□□ -2.7
snR39BsnR39B TY1B-PR3P0C2J1 1755 aaKnown RBP-1.84□□□□□ -2.7
snR39BsnR39B RPL36BO14455 100 aaKnown RBP-1.84□□□□□ -2.7
snR39BsnR39B RPL36AP05745 100 aaPredicted RBP-1.84□□□□□ -2.7
snR39BsnR39B QCR10P37299 77 aa-1.84□□□□□ -2.7
snR39BsnR39B PDX3P38075 228 aaKnown RBP-1.84□□□□□ -2.7
snR39BsnR39B YER187WP40102 141 aa-1.84□□□□□ -2.7
snR39BsnR39B LSM1P47017 172 aaKnown RBP-1.84□□□□□ -2.7
snR39BsnR39B YDR476CQ03362 224 aa-1.84□□□□□ -2.7
snR39BsnR39B YOR097CQ12274 175 aaPredicted RBP-1.84□□□□□ -2.7
snR39BsnR39B EFG1Q3E705 233 aaKnown RBP-1.84□□□□□ -2.7
snR39BsnR39B RPB4P20433 221 aaPredicted RBP-1.85□□□□□ -2.71
snR39BsnR39B TRS20P38334 175 aa-1.85□□□□□ -2.71
snR39BsnR39B HSP10P38910 106 aa-1.85□□□□□ -2.71
snR39BsnR39B YAL064WP39711 94 aa-1.85□□□□□ -2.71
snR39BsnR39B APQ12P40532 138 aa-1.85□□□□□ -2.71
snR39BsnR39B YIP3P53633 176 aa-1.85□□□□□ -2.71
snR39BsnR39B PKR1Q03880 122 aaKnown RBP-1.85□□□□□ -2.71
snR39BsnR39B YPR202WQ08993 238 aa-1.85□□□□□ -2.71
snR39BsnR39B YLR285C-AQ3E771 56 aa-1.85□□□□□ -2.71
snR39BsnR39B SSN2P38931 1420 aa-1.85□□□□□ -2.71
snR39BsnR39B PAU21P0CE86 164 aa-1.86□□□□□ -2.71
snR39BsnR39B PAU22P0CE87 164 aa-1.86□□□□□ -2.71
snR39BsnR39B YKL044WP36092 106 aa-1.86□□□□□ -2.71
snR39BsnR39B CYB5P40312 120 aa-1.86□□□□□ -2.71
snR39BsnR39B CAT8P39113 1433 aa-1.86□□□□□ -2.71
snR39BsnR39B IRA1P18963 3092 aa-1.87□□□□□ -2.71
snR39BsnR39B YBR090CP38253 122 aa-1.87□□□□□ -2.71
snR39BsnR39B YIL086CP40503 102 aa-1.87□□□□□ -2.71
snR39BsnR39B LSM8P47093 109 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B RPL38P49167 78 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B YLR042CQ07990 161 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-DR5P0C2I2 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-DR6P0C2I3 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-LR2P0C2I5 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-PR1P0C2I9 1755 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B TY1B-PR2P0C2J0 1756 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-JR1P47098 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-JR2P47100 1755 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B TY1B-ML2Q03434 1755 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B TY1B-ER1Q03612 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-DR1Q03855 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-MR2Q04670 1755 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B TY1B-ML1Q04711 1755 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B TY1B-GR1Q12141 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-GR2Q12269 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-OLQ12273 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-PLQ12414 1755 aaKnown RBP-1.87□□□□□ -2.71
snR39BsnR39B TY1B-ORQ92393 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B TY1B-DR3Q99231 1755 aa-1.87□□□□□ -2.71
snR39BsnR39B YKT6P36015 200 aaKnown RBP-1.88□□□□□ -2.71
snR39BsnR39B SDH7Q04401 133 aa-1.88□□□□□ -2.71
snR39BsnR39B YDR182W-AQ3E796 67 aa-1.88□□□□□ -2.71
snR39BsnR39B MMS1Q06211 1407 aa-1.89□□□□□ -2.71
snR39BsnR39B RPC19P28000 142 aaKnown RBP-1.9□□□□□ -2.71
snR39BsnR39B MPC2P38857 129 aa-1.9□□□□□ -2.71
snR39BsnR39B SNF11P38956 169 aa-1.9□□□□□ -2.71
snR39BsnR39B YIL014C-AQ02598 104 aa-1.9□□□□□ -2.71
snR39BsnR39B NSL1Q12143 216 aa-1.9□□□□□ -2.71
snR39BsnR39B YOR008C-AQ3E7B9 74 aa-1.9□□□□□ -2.71
snR39BsnR39B ATP7P30902 174 aa-1.91□□□□□ -2.72
snR39BsnR39B TOP2P06786 1428 aaKnown RBP-1.92□□□□□ -2.72
snR39BsnR39B QCR2P07257 368 aa-1.93□□□□□ -2.72
snR39BsnR39B RPL35AP0CX84 120 aaKnown RBP-1.93□□□□□ -2.72
snR39BsnR39B RPL35BP0CX85 120 aaKnown RBP-1.93□□□□□ -2.72
snR39BsnR39B PAM16P42949 149 aa-1.93□□□□□ -2.72
snR39BsnR39B COX19Q3E731 98 aa-1.93□□□□□ -2.72
snR39BsnR39B TY1B-BLQ12490 1755 aa-1.93□□□□□ -2.72
snR39BsnR39B YPK9Q12697 1472 aa-1.94□□□□□ -2.72
snR39BsnR39B HUR1P45820 110 aa-1.94□□□□□ -2.72
snR39BsnR39B YKL018C-AQ3E7A7 99 aa-1.94□□□□□ -2.72
snR39BsnR39B YRF1-2P40105 1681 aa-1.94□□□□□ -2.72
snR39BsnR39B AIM19P40502 157 aa-1.95□□□□□ -2.72
snR39BsnR39B AIM11P87275 137 aa-1.95□□□□□ -2.72
snR39BsnR39B MIX14Q04341 121 aa-1.95□□□□□ -2.72
snR39BsnR39B YLR053CQ12026 108 aa-1.95□□□□□ -2.72
snR39BsnR39B YCL048W-AQ2V2Q2 79 aa-1.95□□□□□ -2.72
snR39BsnR39B RAD50P12753 1312 aa-1.95□□□□□ -2.72
snR39BsnR39B UBC5P15732 148 aa-1.96□□□□□ -2.72
snR39BsnR39B YCR050CP25630 102 aa-1.96□□□□□ -2.72
snR39BsnR39B CGR1P53188 120 aa-1.96□□□□□ -2.72
snR39BsnR39B TIM8P57744 87 aa-1.96□□□□□ -2.72
snR39BsnR39B CWC21Q03375 135 aaKnown RBP-1.96□□□□□ -2.72
snR39BsnR39B YOR072W-BQ3E832 53 aa-1.96□□□□□ -2.72
Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms