RNA–Protein interactions for RNA: YPL194W

DDC1, Transcript of DNA damage checkpoint protein, yeast

Gene DDC1, Length 1,839 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDC1	YPL194W	PEP8	P40335	379 aa		4.28	□□□□□ -1.72
DDC1	YPL194W	YFL065C	P43539	102 aa		4.28	□□□□□ -1.72
DDC1	YPL194W	ELP6	Q04868	273 aa		4.28	□□□□□ -1.72
DDC1	YPL194W	YPR203W	Q08994	102 aa		4.28	□□□□□ -1.72
DDC1	YPL194W	FLO11	P08640	1367 aa		4.28	□□□□□ -1.72
DDC1	YPL194W	YDL241W	Q07738	123 aa		4.28	□□□□□ -1.72
DDC1	YPL194W	YOR015W	Q12169	119 aa		4.28	□□□□□ -1.72
DDC1	YPL194W	MIG1	P27705	504 aa		4.27	□□□□□ -1.73
DDC1	YPL194W	ASK1	P35734	292 aa		4.27	□□□□□ -1.73
DDC1	YPL194W	YLR296W	Q05898	108 aa		4.27	□□□□□ -1.73
DDC1	YPL194W	IRC23	Q08416	157 aa		4.27	□□□□□ -1.73
DDC1	YPL194W	RRT15	Q3E811	62 aa		4.27	□□□□□ -1.73
DDC1	YPL194W	CHC1	P22137	1653 aa	Known RBP	4.26	□□□□□ -1.73
DDC1	YPL194W	YLR419W	Q06698	1435 aa	Known RBP	4.26	□□□□□ -1.73
DDC1	YPL194W	YCR043C	P25361	127 aa		4.26	□□□□□ -1.73
DDC1	YPL194W	MIX14	Q04341	121 aa		4.26	□□□□□ -1.73
DDC1	YPL194W	IRC19	Q07843	230 aa		4.26	□□□□□ -1.73
DDC1	YPL194W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.26	□□□□□ -1.73
DDC1	YPL194W	MID2	P36027	376 aa		4.25	□□□□□ -1.73
DDC1	YPL194W	YHL018W	P38744	120 aa	Predicted RBP	4.25	□□□□□ -1.73
DDC1	YPL194W	HUR1	P45820	110 aa		4.25	□□□□□ -1.73
DDC1	YPL194W	STF2	P16965	84 aa		4.25	□□□□□ -1.73
DDC1	YPL194W	FUN14	P18411	198 aa		4.25	□□□□□ -1.73
DDC1	YPL194W	YBL059W	P34224	193 aa		4.25	□□□□□ -1.73
DDC1	YPL194W	RSM19	P53733	91 aa	Predicted RBP	4.24	□□□□□ -1.73
DDC1	YPL194W	MDM35	O60200	86 aa		4.23	□□□□□ -1.73
DDC1	YPL194W	MRPL27	P36526	146 aa	Predicted RBP	4.23	□□□□□ -1.73
DDC1	YPL194W	NRG2	P38082	220 aa		4.23	□□□□□ -1.73
DDC1	YPL194W	GRX5	Q02784	150 aa		4.23	□□□□□ -1.73
DDC1	YPL194W	VMR1	P38735	1592 aa		4.23	□□□□□ -1.73
DDC1	YPL194W	YCR085W	P25650	117 aa		4.23	□□□□□ -1.73
DDC1	YPL194W	YER187W	P40102	141 aa		4.23	□□□□□ -1.73
DDC1	YPL194W	YOR268C	Q08734	132 aa		4.23	□□□□□ -1.73
DDC1	YPL194W	PAI3	P01094	68 aa		4.22	□□□□□ -1.73
DDC1	YPL194W	ECM34	P38728	170 aa		4.22	□□□□□ -1.73
DDC1	YPL194W	IGO1	P53897	168 aa		4.22	□□□□□ -1.73
DDC1	YPL194W	YDR042C	Q03205	200 aa		4.22	□□□□□ -1.73
DDC1	YPL194W	IML1	P47170	1584 aa		4.21	□□□□□ -1.73
DDC1	YPL194W	YHR180W	P38868	163 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	YEL067C	P39978	195 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	YNR077C	P53758	84 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	ATG41	Q12048	136 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	NUP188	P52593	1655 aa	Known RBP	4.21	□□□□□ -1.74
DDC1	YPL194W	YKR045C	P36138	183 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	VMA21	P41806	77 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	PAU12	P53343	120 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	SUS1	Q6WNK7	96 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	YBR298C-A	Q8TGK4	73 aa		4.21	□□□□□ -1.74
DDC1	YPL194W	YRF1-2	P40105	1681 aa		4.2	□□□□□ -1.74
DDC1	YPL194W	SVP26	P38869	228 aa		4.2	□□□□□ -1.74
DDC1	YPL194W	PIR1	Q03178	341 aa		4.2	□□□□□ -1.74
DDC1	YPL194W	PRM3	Q08931	133 aa		4.2	□□□□□ -1.74
DDC1	YPL194W	YPL261C	Q08976	102 aa		4.2	□□□□□ -1.74
DDC1	YPL194W	POC4	Q12245	148 aa	Predicted RBP	4.2	□□□□□ -1.74
DDC1	YPL194W	DAD1	Q12248	94 aa		4.2	□□□□□ -1.74
DDC1	YPL194W	DOP1	Q03921	1698 aa		4.2	□□□□□ -1.74
DDC1	YPL194W	SSS1	P35179	80 aa		4.19	□□□□□ -1.74
DDC1	YPL194W	YHR138C	P38841	114 aa	Predicted RBP	4.19	□□□□□ -1.74
DDC1	YPL194W	HSP10	P38910	106 aa		4.19	□□□□□ -1.74
DDC1	YPL194W	YML079W	Q03629	201 aa		4.19	□□□□□ -1.74
DDC1	YPL194W	MHF1	Q3E835	90 aa		4.19	□□□□□ -1.74
DDC1	YPL194W	NUP192	P47054	1683 aa		4.19	□□□□□ -1.74
DDC1	YPL194W	RPS25B	P0C0T4	108 aa	Known RBP	4.18	□□□□□ -1.74
DDC1	YPL194W	PAU21	P0CE86	164 aa		4.18	□□□□□ -1.74
DDC1	YPL194W	PAU22	P0CE87	164 aa		4.18	□□□□□ -1.74
DDC1	YPL194W	RPL40A	P0CH08	128 aa	Known RBP	4.18	□□□□□ -1.74
DDC1	YPL194W	RPL40B	P0CH09	128 aa	Known RBP	4.18	□□□□□ -1.74
DDC1	YPL194W	PAU2	P32612	120 aa		4.18	□□□□□ -1.74
DDC1	YPL194W	HYR1	P40581	163 aa	Known RBP	4.18	□□□□□ -1.74
DDC1	YPL194W	NMA1	Q06178	401 aa	Known RBP	4.18	□□□□□ -1.74
DDC1	YPL194W	EMC6	Q12431	108 aa		4.18	□□□□□ -1.74
DDC1	YPL194W	YLR363W-A	Q3E747	85 aa		4.18	□□□□□ -1.74
DDC1	YPL194W	ROM2	P51862	1356 aa	Known RBP	4.18	□□□□□ -1.74
DDC1	YPL194W	KRE1	P17260	313 aa		4.17	□□□□□ -1.74
DDC1	YPL194W	YKR032W	P36127	104 aa		4.17	□□□□□ -1.74
DDC1	YPL194W	DNF2	Q12675	1612 aa		4.17	□□□□□ -1.74
DDC1	YPL194W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	RIP-Chip
DDC1	YPL194W	YGR269W	P40326	108 aa		4.16	□□□□□ -1.74
DDC1	YPL194W	YPR013C	Q12145	317 aa		4.16	□□□□□ -1.74
DDC1	YPL194W	AUS1	Q08409	1394 aa		4.16	□□□□□ -1.74
DDC1	YPL194W	SNN1	P48232	102 aa		4.16	□□□□□ -1.74
DDC1	YPL194W	PPT2	Q12036	173 aa		4.16	□□□□□ -1.74
DDC1	YPL194W	YMR175W-A	Q3E766	64 aa		4.16	□□□□□ -1.74
DDC1	YPL194W	ENV10	Q99382	181 aa		4.16	□□□□□ -1.74
DDC1	YPL194W	MSB2	P32334	1306 aa		4.15	□□□□□ -1.74
DDC1	YPL194W	YHR213W	P0CI67	198 aa		4.15	□□□□□ -1.75
DDC1	YPL194W	RPA12	P32529	125 aa	Known RBP	4.15	□□□□□ -1.75
DDC1	YPL194W	PAU24	P38155	120 aa		4.15	□□□□□ -1.75
DDC1	YPL194W	YGL149W	P53116	101 aa		4.15	□□□□□ -1.75
DDC1	YPL194W	PAU19	P0CE85	124 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	PAU3	P25610	124 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	DCV1	P43595	202 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	NAT5	Q08689	176 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	OST5	Q92316	86 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	YLR236C	A0A023PZG4	107 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	RPS23A	P0CX29	145 aa	Known RBP	4.14	□□□□□ -1.75
DDC1	YPL194W	RPS23B	P0CX30	145 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	BRP1	P53194	125 aa		4.14	□□□□□ -1.75
DDC1	YPL194W	RPL22B	P56628	122 aa	Known RBP	4.14	□□□□□ -1.75
DDC1	YPL194W	HAP1	P0CE41	1502 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms