RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W GPI19Q04082 140 aa4.73□□□□□ -1.65
LSC1YOR142W ORM2Q06144 216 aa4.73□□□□□ -1.65
LSC1YOR142W DXO1Q06349 442 aa4.73□□□□□ -1.65
LSC1YOR142W SNU23Q12368 194 aaPredicted RBP4.73□□□□□ -1.65
LSC1YOR142W YNR034W-AQ3E841 98 aa4.73□□□□□ -1.65
LSC1YOR142W HMRA1P0CY11 126 aa4.72□□□□□ -1.65
LSC1YOR142W NHP6AP11632 93 aaKnown RBP4.72□□□□□ -1.65
LSC1YOR142W ZRT1P32804 376 aa4.72□□□□□ -1.65
LSC1YOR142W ATG8P38182 117 aaRIP-Chip data4.72□□□□□ -1.65not detected
LSC1YOR142W SDH8P38345 138 aa4.72□□□□□ -1.65
LSC1YOR142W YOP1Q12402 180 aa4.72□□□□□ -1.65
LSC1YOR142W TMA7Q3E764 64 aaKnown RBP4.72□□□□□ -1.65
LSC1YOR142W RPL27AP0C2H6 136 aaKnown RBP4.71□□□□□ -1.66
LSC1YOR142W SUR2P38992 349 aa4.71□□□□□ -1.66
LSC1YOR142W PAU15P40585 124 aa4.71□□□□□ -1.66
LSC1YOR142W DAN1P47178 298 aa4.71□□□□□ -1.66
LSC1YOR142W APS2Q00381 147 aa4.71□□□□□ -1.66
LSC1YOR142W ATG33Q06485 197 aa4.71□□□□□ -1.66
LSC1YOR142W YPR195CQ06594 109 aa4.71□□□□□ -1.66
LSC1YOR142W DGA1Q08650 418 aa4.71□□□□□ -1.66
LSC1YOR142W DAD2P36162 133 aa4.7□□□□□ -1.66
LSC1YOR142W PAU7P39545 55 aa4.7□□□□□ -1.66
LSC1YOR142W IRC22P40006 225 aa4.7□□□□□ -1.66
LSC1YOR142W PAU5P43575 122 aa4.7□□□□□ -1.66
LSC1YOR142W MGA1P53050 456 aa4.7□□□□□ -1.66
LSC1YOR142W GTO3Q04806 366 aa4.7□□□□□ -1.66
LSC1YOR142W YLL066W-BQ8TGJ7 56 aa4.7□□□□□ -1.66
LSC1YOR142W FRS1P15624 595 aaKnown RBP4.69□□□□□ -1.66
LSC1YOR142W KTI12P34253 313 aaKnown RBP4.69□□□□□ -1.66
LSC1YOR142W YKR032WP36127 104 aa4.69□□□□□ -1.66
LSC1YOR142W CDC40P40968 455 aaPredicted RBP4.69□□□□□ -1.66
LSC1YOR142W SDS23P53172 527 aa4.69□□□□□ -1.66
LSC1YOR142W DPP1Q05521 289 aa4.69□□□□□ -1.66
LSC1YOR142W UBC5P15732 148 aa4.68□□□□□ -1.66
LSC1YOR142W SPC1P46965 94 aa4.68□□□□□ -1.66
LSC1YOR142W RPL23AP0CX41 137 aaKnown RBP4.67□□□□□ -1.66
LSC1YOR142W RPL23BP0CX42 137 aaKnown RBP4.67□□□□□ -1.66
LSC1YOR142W YBR013CP38215 129 aa4.67□□□□□ -1.66
LSC1YOR142W PET8P38921 284 aa4.67□□□□□ -1.66
LSC1YOR142W YGR149WP48236 432 aa4.67□□□□□ -1.66
LSC1YOR142W TVP18Q04767 167 aa4.67□□□□□ -1.66
LSC1YOR142W PBA1Q05778 276 aa4.67□□□□□ -1.66
LSC1YOR142W TEM1P38987 245 aa4.66□□□□□ -1.66
LSC1YOR142W FSF1Q12029 327 aaKnown RBP4.66□□□□□ -1.66
LSC1YOR142W POM33Q12164 279 aa4.66□□□□□ -1.66
LSC1YOR142W RPL33AP05744 107 aaKnown RBP4.65□□□□□ -1.67
LSC1YOR142W RPL42AP0CX27 106 aaKnown RBP4.65□□□□□ -1.67
LSC1YOR142W RPL42BP0CX28 106 aaKnown RBP4.65□□□□□ -1.67
LSC1YOR142W GAT4P40569 121 aa4.65□□□□□ -1.67
LSC1YOR142W RPL33BP41056 107 aaKnown RBP4.65□□□□□ -1.67
LSC1YOR142W NSE4P43124 402 aa4.65□□□□□ -1.67
LSC1YOR142W YCR024C-BQ3E7Z8 88 aa4.65□□□□□ -1.67
LSC1YOR142W SEC4P07560 215 aaKnown RBP4.64□□□□□ -1.67
LSC1YOR142W YJL028WP47062 111 aa4.64□□□□□ -1.67
LSC1YOR142W PMP3P87284 55 aa4.64□□□□□ -1.67
LSC1YOR142W POR1P04840 283 aaKnown RBP4.63□□□□□ -1.67
LSC1YOR142W YNL200CP40165 246 aaKnown RBP4.63□□□□□ -1.67
LSC1YOR142W DCV1P43595 202 aa4.63□□□□□ -1.67
LSC1YOR142W HHO1P53551 258 aa4.63□□□□□ -1.67
LSC1YOR142W RRT15Q3E811 62 aa4.63□□□□□ -1.67
LSC1YOR142W YMR122W-AQ3E842 84 aa4.63□□□□□ -1.67
LSC1YOR142W SAL1D6W196 494 aa4.62□□□□□ -1.67
LSC1YOR142W DIF1O13577 133 aa4.62□□□□□ -1.67
LSC1YOR142W RTC6O14464 93 aa4.62□□□□□ -1.67
LSC1YOR142W ARC15P40518 154 aaRIP-Chip data4.62□□□□□ -1.67not detected
LSC1YOR142W ERI1P62651 68 aaKnown RBP4.62□□□□□ -1.67
LSC1YOR142W YDR115WQ04598 105 aa4.62□□□□□ -1.67
LSC1YOR142W PAU19P0CE85 124 aa4.61□□□□□ -1.67
LSC1YOR142W PAU21P0CE86 164 aa4.61□□□□□ -1.67
LSC1YOR142W PAU22P0CE87 164 aa4.61□□□□□ -1.67
LSC1YOR142W PAU3P25610 124 aa4.61□□□□□ -1.67
LSC1YOR142W YGL088WP53151 121 aa4.61□□□□□ -1.67
LSC1YOR142W WIP1Q2V2P8 89 aa4.61□□□□□ -1.67
LSC1YOR142W RPS22BQ3E7Y3 130 aaKnown RBP4.61□□□□□ -1.67
LSC1YOR142W RPL11AP0C0W9 174 aaKnown RBP4.6□□□□□ -1.67
LSC1YOR142W ANB1P19211 157 aa4.6□□□□□ -1.67
LSC1YOR142W RPL16AP26784 199 aaKnown RBP4.6□□□□□ -1.67
LSC1YOR142W MRP49P32388 137 aa4.6□□□□□ -1.67
LSC1YOR142W YBR209WP38311 105 aa4.6□□□□□ -1.67
LSC1YOR142W SVP26P38869 228 aa4.6□□□□□ -1.67
LSC1YOR142W YER076CP40049 302 aa4.6□□□□□ -1.67
LSC1YOR142W GLO1P50107 326 aa4.6□□□□□ -1.67
LSC1YOR142W GIS2P53849 153 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
LSC1YOR142W YMR320WQ04897 101 aa4.6□□□□□ -1.67
LSC1YOR142W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
LSC1YOR142W RPL11BQ3E757 174 aaPredicted RBP4.6□□□□□ -1.67
LSC1YOR142W PRE1P22141 198 aaKnown RBP4.59□□□□□ -1.67
LSC1YOR142W YIL059CP40520 121 aa4.59□□□□□ -1.67
LSC1YOR142W YIL014C-AQ02598 104 aa4.59□□□□□ -1.67
LSC1YOR142W MGR2Q02889 113 aa4.59□□□□□ -1.67
LSC1YOR142W FCF1Q05498 189 aaPredicted RBP4.59□□□□□ -1.67
LSC1YOR142W MED7Q08278 222 aa4.59□□□□□ -1.67
LSC1YOR142W YPR014CQ6B0W2 109 aa4.59□□□□□ -1.67
LSC1YOR142W PFY1P07274 126 aa4.58□□□□□ -1.68
LSC1YOR142W AQY1P0CD91 305 aa4.58□□□□□ -1.68
LSC1YOR142W YKR070WP36151 352 aaKnown RBP4.58□□□□□ -1.68
LSC1YOR142W LCL2Q08045 131 aa4.58□□□□□ -1.68
LSC1YOR142W GTT1P40582 234 aa4.57□□□□□ -1.68
LSC1YOR142W YJR146WP47174 117 aa4.57□□□□□ -1.68
LSC1YOR142W ZEO1Q08245 113 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms