RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C MDM35O60200 86 aa2.37□□□□□ -2.03
TOP1YOL006C DCV1P43595 202 aa2.37□□□□□ -2.03
TOP1YOL006C RSM19P53733 91 aaPredicted RBP2.37□□□□□ -2.03
TOP1YOL006C DAD4P69851 72 aa2.37□□□□□ -2.03
TOP1YOL006C SEC7P11075 2009 aaKnown RBP2.37□□□□□ -2.03
TOP1YOL006C ROM2P51862 1356 aaKnown RBP2.36□□□□□ -2.03
TOP1YOL006C RPL40AP0CH08 128 aaKnown RBP2.36□□□□□ -2.03
TOP1YOL006C RPL40BP0CH09 128 aaKnown RBP2.36□□□□□ -2.03
TOP1YOL006C SEC11P15367 167 aa2.36□□□□□ -2.03
TOP1YOL006C YHL018WP38744 120 aaPredicted RBP2.36□□□□□ -2.03
TOP1YOL006C CYB5P40312 120 aa2.36□□□□□ -2.03
TOP1YOL006C YGL260WP53056 76 aa2.36□□□□□ -2.03
TOP1YOL006C YGL149WP53116 101 aa2.36□□□□□ -2.03
TOP1YOL006C GSC2P40989 1895 aa2.36□□□□□ -2.03
TOP1YOL006C COX8P04039 78 aa2.36□□□□□ -2.03
TOP1YOL006C STF2P16965 84 aa2.36□□□□□ -2.03
TOP1YOL006C YER084WP40057 128 aa2.36□□□□□ -2.03
TOP1YOL006C PAU12P53343 120 aa2.36□□□□□ -2.03
TOP1YOL006C YDR114CQ04597 100 aa2.36□□□□□ -2.03
TOP1YOL006C DOP1Q03921 1698 aa2.35□□□□□ -2.03
TOP1YOL006C MYO1P08964 1928 aa2.35□□□□□ -2.03
TOP1YOL006C ESP1Q03018 1630 aa2.35□□□□□ -2.03
TOP1YOL006C RPL26AP05743 127 aaKnown RBP2.35□□□□□ -2.03
TOP1YOL006C FUN14P18411 198 aa2.35□□□□□ -2.03
TOP1YOL006C YKR045CP36138 183 aa2.35□□□□□ -2.03
TOP1YOL006C RPL26BP53221 127 aaKnown RBP2.35□□□□□ -2.03
TOP1YOL006C RRT15Q3E811 62 aa2.35□□□□□ -2.03
TOP1YOL006C OST5Q92316 86 aa2.35□□□□□ -2.03
TOP1YOL006C RIF1P29539 1916 aa2.35□□□□□ -2.03
TOP1YOL006C RPS25BP0C0T4 108 aaKnown RBP2.35□□□□□ -2.03
TOP1YOL006C YHR138CP38841 114 aaPredicted RBP2.35□□□□□ -2.03
TOP1YOL006C RPS25AQ3E792 108 aaPredicted RBP2.35□□□□□ -2.03
TOP1YOL006C SCC2Q04002 1493 aa2.35□□□□□ -2.03
TOP1YOL006C PAU2P32612 120 aa2.34□□□□□ -2.03
TOP1YOL006C NRG2P38082 220 aa2.34□□□□□ -2.03
TOP1YOL006C YFL051CP43552 160 aa2.34□□□□□ -2.03
TOP1YOL006C YMR030W-AQ3E760 96 aa2.34□□□□□ -2.03
TOP1YOL006C HYR1P40581 163 aaKnown RBP2.34□□□□□ -2.04
TOP1YOL006C CWP2P43497 92 aa2.34□□□□□ -2.04
TOP1YOL006C YDR042CQ03205 200 aa2.34□□□□□ -2.04
TOP1YOL006C FIT2Q08906 153 aa2.34□□□□□ -2.04
TOP1YOL006C VPS68Q12016 184 aa2.34□□□□□ -2.04
TOP1YOL006C SUS1Q6WNK7 96 aa2.34□□□□□ -2.04
TOP1YOL006C RTC6O14464 93 aa2.33□□□□□ -2.04
TOP1YOL006C MRPS9P38120 278 aa2.33□□□□□ -2.04
TOP1YOL006C RPL22BP56628 122 aaKnown RBP2.33□□□□□ -2.04
TOP1YOL006C COA4Q05809 96 aa2.33□□□□□ -2.04
TOP1YOL006C NUP170P38181 1502 aa2.33□□□□□ -2.04
TOP1YOL006C NUP159P40477 1460 aa2.33□□□□□ -2.04
TOP1YOL006C SOD1P00445 154 aaKnown RBP2.33□□□□□ -2.04
TOP1YOL006C UTH1P36135 365 aa2.33□□□□□ -2.04
TOP1YOL006C LSM2P38203 95 aaKnown RBP2.33□□□□□ -2.04
TOP1YOL006C SVP26P38869 228 aa2.33□□□□□ -2.04
TOP1YOL006C POP3P53833 195 aaPredicted RBP2.33□□□□□ -2.04
TOP1YOL006C YLR363W-AQ3E747 85 aa2.33□□□□□ -2.04
TOP1YOL006C CMC4Q3E7A9 73 aa2.33□□□□□ -2.04
TOP1YOL006C PCC1Q3E833 88 aa2.33□□□□□ -2.04
TOP1YOL006C YHR213W-AQ8TGT4 77 aa2.33□□□□□ -2.04
TOP1YOL006C DNF3Q12674 1656 aa2.32□□□□□ -2.04
TOP1YOL006C PAU24P38155 120 aa2.32□□□□□ -2.04
TOP1YOL006C YEL014CP39999 101 aa2.32□□□□□ -2.04
TOP1YOL006C FAS2P19097 1887 aaKnown RBP2.32□□□□□ -2.04
TOP1YOL006C YJL197C-AP0C5P0 93 aa2.31□□□□□ -2.04
TOP1YOL006C PAU19P0CE85 124 aa2.31□□□□□ -2.04
TOP1YOL006C PAU3P25610 124 aa2.31□□□□□ -2.04
TOP1YOL006C UTR5P32630 166 aa2.31□□□□□ -2.04
TOP1YOL006C ATG8P38182 117 aaRIP-Chip data2.31□□□□□ -2.04not detected
TOP1YOL006C YFL065CP43539 102 aa2.31□□□□□ -2.04
TOP1YOL006C DAN1P47178 298 aa2.31□□□□□ -2.04
TOP1YOL006C SNN1P48232 102 aa2.31□□□□□ -2.04
TOP1YOL006C YPR203WQ08994 102 aa2.31□□□□□ -2.04
TOP1YOL006C EMC6Q12431 108 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-DR5P0C2I2 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-DR6P0C2I3 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-LR2P0C2I5 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-LR3P0C2I6 1755 aaKnown RBP2.31□□□□□ -2.04
TOP1YOL006C TY1B-PR1P0C2I9 1755 aaKnown RBP2.31□□□□□ -2.04
TOP1YOL006C TY1B-PR3P0C2J1 1755 aaKnown RBP2.31□□□□□ -2.04
TOP1YOL006C TY1B-JR1P47098 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-ML2Q03434 1755 aaKnown RBP2.31□□□□□ -2.04
TOP1YOL006C TY1B-ER1Q03612 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-ML1Q04711 1755 aaKnown RBP2.31□□□□□ -2.04
TOP1YOL006C TY1B-GR2Q12269 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-OLQ12273 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-GR3Q12316 1755 aa2.31□□□□□ -2.04
TOP1YOL006C TY1B-PLQ12414 1755 aaKnown RBP2.31□□□□□ -2.04
TOP1YOL006C TY1B-ORQ92393 1755 aa2.31□□□□□ -2.04
TOP1YOL006C YHR213WP0CI67 198 aa2.31□□□□□ -2.04
TOP1YOL006C CUP1-1P0CX80 61 aa2.31□□□□□ -2.04
TOP1YOL006C CUP1-2P0CX81 61 aa2.31□□□□□ -2.04
TOP1YOL006C YCR085WP25650 117 aa2.31□□□□□ -2.04
TOP1YOL006C HSP150P32478 413 aa2.31□□□□□ -2.04
TOP1YOL006C YIR020CP40575 100 aa2.31□□□□□ -2.04
TOP1YOL006C YIL014C-AQ02598 104 aa2.31□□□□□ -2.04
TOP1YOL006C HAP1P0CE41 1502 aa2.31□□□□□ -2.04
TOP1YOL006C YJR146WP47174 117 aa2.3□□□□□ -2.04
TOP1YOL006C MET31Q03081 177 aa2.3□□□□□ -2.04
TOP1YOL006C KRE1P17260 313 aa2.3□□□□□ -2.04
TOP1YOL006C POC4Q12245 148 aaPredicted RBP2.3□□□□□ -2.04
TOP1YOL006C GDB1Q06625 1536 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms