RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YER076CP40049 302 aa6.81□□□□□ -1.32
RPD3YNL330C YMR103CQ04436 120 aa6.81□□□□□ -1.32
RPD3YNL330C PRY2P36110 329 aa6.8□□□□□ -1.32
RPD3YNL330C MIC12P38341 106 aa6.8□□□□□ -1.32
RPD3YNL330C AGE2P40529 298 aa6.8□□□□□ -1.32
RPD3YNL330C YIR020CP40575 100 aa6.8□□□□□ -1.32
RPD3YNL330C SOH1P38633 127 aa6.79□□□□□ -1.32
RPD3YNL330C SPI1P40092 148 aa6.79□□□□□ -1.32
RPD3YNL330C WWM1P43582 211 aaKnown RBP6.79□□□□□ -1.32
RPD3YNL330C ATP23P53722 227 aa6.79□□□□□ -1.32
RPD3YNL330C MOT3P54785 490 aaKnown RBP6.79□□□□□ -1.32
RPD3YNL330C TIM10P87108 93 aa6.79□□□□□ -1.32
RPD3YNL330C FCF1Q05498 189 aaPredicted RBP6.79□□□□□ -1.32
RPD3YNL330C DGA1Q08650 418 aa6.79□□□□□ -1.32
RPD3YNL330C SPO24Q3E752 67 aa6.79□□□□□ -1.32
RPD3YNL330C PAI3P01094 68 aa6.78□□□□□ -1.32
RPD3YNL330C AQY1P0CD91 305 aa6.78□□□□□ -1.32
RPD3YNL330C PCL2P25693 308 aa6.78□□□□□ -1.32
RPD3YNL330C YPL073CP40323 161 aa6.78□□□□□ -1.32
RPD3YNL330C LCB3P47013 409 aa6.78□□□□□ -1.32
RPD3YNL330C YNL198CP40166 100 aa6.77□□□□□ -1.32
RPD3YNL330C MRPL49P40858 161 aaPredicted RBP6.77□□□□□ -1.32
RPD3YNL330C ABM1P47146 123 aa6.77□□□□□ -1.32
RPD3YNL330C TOS6P48560 102 aa6.77□□□□□ -1.32
RPD3YNL330C TMC1Q08422 150 aaPredicted RBP6.77□□□□□ -1.32
RPD3YNL330C YLR112WQ12130 139 aa6.77□□□□□ -1.32
RPD3YNL330C RDL1Q12305 139 aaKnown RBP6.77□□□□□ -1.32
RPD3YNL330C YIL102C-AQ2V2P5 75 aa6.77□□□□□ -1.32
RPD3YNL330C CPR1P14832 162 aaKnown RBP6.76□□□□□ -1.33
RPD3YNL330C KTI12P34253 313 aaKnown RBP6.76□□□□□ -1.33
RPD3YNL330C NCE103P53615 221 aa6.76□□□□□ -1.33
RPD3YNL330C ECM33P38248 429 aaKnown RBP6.76□□□□□ -1.33
RPD3YNL330C MST28P39552 234 aa6.76□□□□□ -1.33
RPD3YNL330C ELC1Q03071 99 aa6.76□□□□□ -1.33
RPD3YNL330C YKL023C-AQ2V2P3 75 aa6.76□□□□□ -1.33
RPD3YNL330C VMA11P32842 164 aa6.75□□□□□ -1.33
RPD3YNL330C YNL194CP40169 301 aa6.75□□□□□ -1.33
RPD3YNL330C YLR296WQ05898 108 aa6.75□□□□□ -1.33
RPD3YNL330C HMRA2P0CY13 119 aa6.74□□□□□ -1.33
RPD3YNL330C AGA1P32323 725 aa6.74□□□□□ -1.33
RPD3YNL330C YKL070WP36087 169 aa6.74□□□□□ -1.33
RPD3YNL330C YML122CQ03207 126 aa6.74□□□□□ -1.33
RPD3YNL330C RPL42AP0CX27 106 aaKnown RBP6.73□□□□□ -1.33
RPD3YNL330C RPL42BP0CX28 106 aaKnown RBP6.73□□□□□ -1.33
RPD3YNL330C HYP2P23301 157 aaKnown RBP6.73□□□□□ -1.33
RPD3YNL330C ARO2P28777 376 aaKnown RBP6.73□□□□□ -1.33
RPD3YNL330C KEG1P43614 200 aa6.73□□□□□ -1.33
RPD3YNL330C YMR181CQ03231 154 aa6.73□□□□□ -1.33
RPD3YNL330C YPL257WQ08974 193 aa6.73□□□□□ -1.33
RPD3YNL330C YPL261CQ08976 102 aa6.73□□□□□ -1.33
RPD3YNL330C DFM1Q12743 341 aaKnown RBP6.73□□□□□ -1.33
RPD3YNL330C COA3Q3E7B2 85 aa6.73□□□□□ -1.33
RPD3YNL330C RPL32P38061 130 aaKnown RBP6.72□□□□□ -1.33
RPD3YNL330C YHR022CP38763 256 aa6.72□□□□□ -1.33
RPD3YNL330C GLO1P50107 326 aa6.72□□□□□ -1.33
RPD3YNL330C YMR317WQ04893 1140 aa6.72□□□□□ -1.33
RPD3YNL330C CCW12Q12127 133 aa6.72□□□□□ -1.33
RPD3YNL330C GCN1P33892 2672 aaKnown RBP6.71□□□□□ -1.33
RPD3YNL330C INO2P26798 304 aa6.71□□□□□ -1.34
RPD3YNL330C YGR025WP53216 100 aa6.71□□□□□ -1.34
RPD3YNL330C YOR008C-AQ3E7B9 74 aa6.71□□□□□ -1.34
RPD3YNL330C YKR041WP36134 250 aa6.7□□□□□ -1.34
RPD3YNL330C CIN5P40917 295 aa6.7□□□□□ -1.34
RPD3YNL330C TOS8P53147 276 aa6.7□□□□□ -1.34
RPD3YNL330C YIP3P53633 176 aa6.7□□□□□ -1.34
RPD3YNL330C YNL146C-AQ3E7Z1 64 aa6.7□□□□□ -1.34
RPD3YNL330C POP7P38291 140 aa6.69□□□□□ -1.34
RPD3YNL330C YER181CP40097 107 aa6.69□□□□□ -1.34
RPD3YNL330C URM1P40554 99 aaPredicted RBP6.69□□□□□ -1.34
RPD3YNL330C YBR200W-AQ3E755 54 aa6.69□□□□□ -1.34
RPD3YNL330C ADH1P00330 348 aaKnown RBP6.68□□□□□ -1.34
RPD3YNL330C VPS55P47111 140 aa6.68□□□□□ -1.34
RPD3YNL330C SLO1Q3E784 85 aa6.68□□□□□ -1.34
RPD3YNL330C BPH1P25356 2167 aa6.67□□□□□ -1.34
RPD3YNL330C VAR1P02381 398 aa6.67□□□□□ -1.34
RPD3YNL330C YNL217WP40152 326 aa6.67□□□□□ -1.34
RPD3YNL330C DCV1P43595 202 aa6.67□□□□□ -1.34
RPD3YNL330C SPG4Q04438 115 aa6.67□□□□□ -1.34
RPD3YNL330C SCW10Q04951 389 aa6.67□□□□□ -1.34
RPD3YNL330C HOR7Q05827 59 aa6.67□□□□□ -1.34
RPD3YNL330C PRM7Q12459 698 aa6.67□□□□□ -1.34
RPD3YNL330C YOR011W-AQ3E807 68 aa6.67□□□□□ -1.34
RPD3YNL330C YOL085CQ99345 113 aa6.67□□□□□ -1.34
RPD3YNL330C IGO2Q9P305 131 aa6.67□□□□□ -1.34
RPD3YNL330C YBR056W-AI2HB52 66 aa6.66□□□□□ -1.34
RPD3YNL330C YPR013CQ12145 317 aa6.66□□□□□ -1.34
RPD3YNL330C YPR053CQ6Q5F3 151 aa6.66□□□□□ -1.34
RPD3YNL330C CYC7P00045 113 aa6.65□□□□□ -1.35
RPD3YNL330C OXA1P39952 402 aa6.65□□□□□ -1.35
RPD3YNL330C DUO1P53168 247 aaKnown RBP6.65□□□□□ -1.35
RPD3YNL330C AIM11P87275 137 aa6.65□□□□□ -1.35
RPD3YNL330C RRG8Q06109 277 aa6.65□□□□□ -1.35
RPD3YNL330C YEL067CP39978 195 aa6.64□□□□□ -1.35
RPD3YNL330C YNR077CP53758 84 aa6.64□□□□□ -1.35
RPD3YNL330C YNL092WP53934 400 aa6.64□□□□□ -1.35
RPD3YNL330C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
RPD3YNL330C PRM3Q08931 133 aa6.64□□□□□ -1.35
RPD3YNL330C YOR097CQ12274 175 aaPredicted RBP6.64□□□□□ -1.35
RPD3YNL330C CCW14O13547 238 aa6.63□□□□□ -1.35
RPD3YNL330C YDL022C-AP0C5L6 82 aa6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms