RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W UBC4P15731 148 aa2.39□□□□□ -2.03
SSU72YNL222W GCV3P39726 170 aaPredicted RBP2.39□□□□□ -2.03
SSU72YNL222W YNL200CP40165 246 aaKnown RBP2.39□□□□□ -2.03
SSU72YNL222W YDR119W-AQ2V2P9 66 aa2.39□□□□□ -2.03
SSU72YNL222W YLR363W-AQ3E747 85 aa2.39□□□□□ -2.03
SSU72YNL222W RRT15Q3E811 62 aa2.39□□□□□ -2.03
SSU72YNL222W MIC10Q96VH5 97 aa2.39□□□□□ -2.03
SSU72YNL222W HTL1Q9URQ5 78 aa2.39□□□□□ -2.03
SSU72YNL222W DOP1Q03921 1698 aa2.38□□□□□ -2.03
SSU72YNL222W RPL22AP05749 121 aaKnown RBP2.38□□□□□ -2.03
SSU72YNL222W PAU19P0CE85 124 aa2.38□□□□□ -2.03
SSU72YNL222W PAU21P0CE86 164 aa2.38□□□□□ -2.03
SSU72YNL222W PAU22P0CE87 164 aa2.38□□□□□ -2.03
SSU72YNL222W YOL162WP0CF19 215 aa2.38□□□□□ -2.03
SSU72YNL222W HSP12P22943 109 aaKnown RBP2.38□□□□□ -2.03
SSU72YNL222W MAK31P23059 88 aa2.38□□□□□ -2.03
SSU72YNL222W PAU3P25610 124 aa2.38□□□□□ -2.03
SSU72YNL222W YCR099CP25657 155 aa2.38□□□□□ -2.03
SSU72YNL222W YBR292CP38357 123 aa2.38□□□□□ -2.03
SSU72YNL222W YHL018WP38744 120 aaPredicted RBP2.38□□□□□ -2.03
SSU72YNL222W SVP26P38869 228 aa2.38□□□□□ -2.03
SSU72YNL222W NSA2P40078 261 aaKnown RBP2.38□□□□□ -2.03
SSU72YNL222W SKI6P46948 246 aaPredicted RBP2.38□□□□□ -2.03
SSU72YNL222W EST3Q03096 181 aa2.38□□□□□ -2.03
SSU72YNL222W YOR186WQ08560 144 aa2.38□□□□□ -2.03
SSU72YNL222W YIL102C-AQ2V2P5 75 aa2.38□□□□□ -2.03
SSU72YNL222W PDR15Q04182 1529 aaKnown RBP2.37□□□□□ -2.03
SSU72YNL222W BET1P22804 142 aa2.37□□□□□ -2.03
SSU72YNL222W RPA12P32529 125 aaKnown RBP2.37□□□□□ -2.03
SSU72YNL222W NRG2P38082 220 aa2.37□□□□□ -2.03
SSU72YNL222W MPC1P53157 130 aaKnown RBP2.37□□□□□ -2.03
SSU72YNL222W DUR1,2P32528 1835 aaKnown RBP2.37□□□□□ -2.03
SSU72YNL222W MSB2P32334 1306 aa2.37□□□□□ -2.03
SSU72YNL222W URA5P13298 226 aaKnown RBP2.36□□□□□ -2.03
SSU72YNL222W DDR48P18899 430 aaKnown RBP2.36□□□□□ -2.03
SSU72YNL222W NHP2P32495 156 aaPredicted RBP2.36□□□□□ -2.03
SSU72YNL222W TOM6P33448 61 aa2.36□□□□□ -2.03
SSU72YNL222W PAU16P35994 123 aa2.36□□□□□ -2.03
SSU72YNL222W MRPL39P36533 70 aa2.36□□□□□ -2.03
SSU72YNL222W YAL064WP39711 94 aa2.36□□□□□ -2.03
SSU72YNL222W YNL217WP40152 326 aa2.36□□□□□ -2.03
SSU72YNL222W YFR035CP43608 114 aa2.36□□□□□ -2.03
SSU72YNL222W PIR5P46999 287 aa2.36□□□□□ -2.03
SSU72YNL222W YGL193CP53097 103 aa2.36□□□□□ -2.03
SSU72YNL222W NIP7Q08962 181 aaKnown RBP2.36□□□□□ -2.03
SSU72YNL222W TIM22Q12328 207 aa2.36□□□□□ -2.03
SSU72YNL222W ATO3Q12359 275 aa2.36□□□□□ -2.03
SSU72YNL222W EMC6Q12431 108 aa2.36□□□□□ -2.03
SSU72YNL222W BNI1P41832 1953 aa2.36□□□□□ -2.03
SSU72YNL222W MDH2P22133 377 aa2.35□□□□□ -2.03
SSU72YNL222W IMP1P28627 190 aa2.35□□□□□ -2.03
SSU72YNL222W RPB7P34087 171 aa2.35□□□□□ -2.03
SSU72YNL222W HTD2P38790 280 aaKnown RBP2.35□□□□□ -2.03
SSU72YNL222W TDA2P40045 126 aa2.35□□□□□ -2.03
SSU72YNL222W PEP8P40335 379 aa2.35□□□□□ -2.03
SSU72YNL222W PAU5P43575 122 aa2.35□□□□□ -2.03
SSU72YNL222W MIC27P50945 234 aa2.35□□□□□ -2.03
SSU72YNL222W YNR064CP53750 290 aa2.35□□□□□ -2.03
SSU72YNL222W YDR042CQ03205 200 aa2.35□□□□□ -2.03
SSU72YNL222W YML079WQ03629 201 aa2.35□□□□□ -2.03
SSU72YNL222W RRT7Q07829 113 aa2.35□□□□□ -2.03
SSU72YNL222W YOR385WQ08909 290 aa2.35□□□□□ -2.03
SSU72YNL222W ATG41Q12048 136 aa2.35□□□□□ -2.03
SSU72YNL222W YFL041W-AQ3E817 63 aa2.35□□□□□ -2.03
SSU72YNL222W RPA190P10964 1664 aaKnown RBP2.34□□□□□ -2.03
SSU72YNL222W FYV4P38783 130 aaPredicted RBP2.34□□□□□ -2.03
SSU72YNL222W SNF11P38956 169 aa2.34□□□□□ -2.03
SSU72YNL222W YER135CP40082 130 aa2.34□□□□□ -2.03
SSU72YNL222W YFL019CP43576 117 aa2.34□□□□□ -2.03
SSU72YNL222W RSM19P53733 91 aaPredicted RBP2.34□□□□□ -2.03
SSU72YNL222W YDR102CQ03864 110 aa2.34□□□□□ -2.03
SSU72YNL222W RIM9Q04734 239 aa2.34□□□□□ -2.03
SSU72YNL222W ELP6Q04868 273 aa2.34□□□□□ -2.03
SSU72YNL222W YLR296WQ05898 108 aa2.34□□□□□ -2.03
SSU72YNL222W YMR175W-AQ3E766 64 aa2.34□□□□□ -2.03
SSU72YNL222W SCS22Q6Q595 175 aa2.34□□□□□ -2.03
SSU72YNL222W YBT1P32386 1661 aa2.34□□□□□ -2.04
SSU72YNL222W YOR093CQ12275 1648 aa2.33□□□□□ -2.04
SSU72YNL222W HSP10P38910 106 aa2.33□□□□□ -2.04
SSU72YNL222W YJL028WP47062 111 aa2.33□□□□□ -2.04
SSU72YNL222W POP3P53833 195 aaPredicted RBP2.33□□□□□ -2.04
SSU72YNL222W YLR365WQ7LIF2 110 aa2.33□□□□□ -2.04
SSU72YNL222W YML100W-AQ8TGT0 57 aa2.33□□□□□ -2.04
SSU72YNL222W ODC2Q99297 307 aa2.33□□□□□ -2.04
SSU72YNL222W YRF1-1P0CX20 1796 aa2.33□□□□□ -2.04
SSU72YNL222W YRF1-5P0CX21 1796 aa2.33□□□□□ -2.04
SSU72YNL222W YRF1-8P0CX22 1796 aa2.33□□□□□ -2.04
SSU72YNL222W RIF1P29539 1916 aa2.32□□□□□ -2.04
SSU72YNL222W URB1P34241 1764 aaKnown RBP2.32□□□□□ -2.04
SSU72YNL222W TIM9O74700 87 aa2.32□□□□□ -2.04
SSU72YNL222W SEC11P15367 167 aa2.32□□□□□ -2.04
SSU72YNL222W YKL044WP36092 106 aa2.32□□□□□ -2.04
SSU72YNL222W YHL042WP38729 150 aa2.32□□□□□ -2.04
SSU72YNL222W SWT21P53873 357 aaPredicted RBP2.32□□□□□ -2.04
SSU72YNL222W TVP15Q03860 143 aa2.32□□□□□ -2.04
SSU72YNL222W MIX14Q04341 121 aa2.32□□□□□ -2.04
SSU72YNL222W SYM1Q06563 197 aa2.32□□□□□ -2.04
SSU72YNL222W HPA2Q06592 156 aa2.32□□□□□ -2.04
SSU72YNL222W TDA8Q6B2U8 126 aa2.32□□□□□ -2.04
SSU72YNL222W YFR032C-BQ8TGU2 87 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms