RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCS7	YMR272C	PRE5	P40302	234 aa	Known RBP	4.74	□□□□□ -1.65
SCS7	YMR272C	UTP23	Q12339	254 aa	Known RBP	4.74	□□□□□ -1.65
SCS7	YMR272C	HTB2	P02294	131 aa		4.73	□□□□□ -1.65
SCS7	YMR272C	SEC4	P07560	215 aa	Known RBP	4.73	□□□□□ -1.65
SCS7	YMR272C	SRP21	P32342	167 aa		4.73	□□□□□ -1.65
SCS7	YMR272C	YDR366C	P87287	132 aa		4.73	□□□□□ -1.65
SCS7	YMR272C	TVP18	Q04767	167 aa		4.73	□□□□□ -1.65
SCS7	YMR272C	PAU23	Q07987	124 aa		4.73	□□□□□ -1.65
SCS7	YMR272C	PAU17	Q12370	124 aa		4.73	□□□□□ -1.65
SCS7	YMR272C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.73	□□□□□ -1.65
SCS7	YMR272C	GSP1	P32835	219 aa	Known RBP	4.72	□□□□□ -1.65
SCS7	YMR272C	GSP2	P32836	220 aa	Known RBP	4.72	□□□□□ -1.65
SCS7	YMR272C	LSM2	P38203	95 aa	Known RBP	4.72	□□□□□ -1.65
SCS7	YMR272C	YHR173C	P38864	112 aa		4.72	□□□□□ -1.65
SCS7	YMR272C	MIG3	P39943	394 aa		4.72	□□□□□ -1.65
SCS7	YMR272C	HUA1	P40325	198 aa		4.72	□□□□□ -1.65
SCS7	YMR272C	YCH1	P42937	148 aa		4.72	□□□□□ -1.65
SCS7	YMR272C	CSM4	Q08955	156 aa		4.72	□□□□□ -1.65
SCS7	YMR272C	YDL157C	Q12082	118 aa		4.72	□□□□□ -1.65
SCS7	YMR272C	SCS22	Q6Q595	175 aa		4.72	□□□□□ -1.65
SCS7	YMR272C	NNK1	P36003	928 aa		4.71	□□□□□ -1.66
SCS7	YMR272C	LCB3	P47013	409 aa		4.71	□□□□□ -1.66
SCS7	YMR272C	RUB1	Q03919	77 aa		4.71	□□□□□ -1.66
SCS7	YMR272C	FIT2	Q08906	153 aa		4.71	□□□□□ -1.66
SCS7	YMR272C	DAD1	Q12248	94 aa		4.71	□□□□□ -1.66
SCS7	YMR272C	YCR001W	P25347	104 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	QRI5	P32344	111 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	ZRT1	P32804	376 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	YHR022C	P38763	256 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	SPC1	P46965	94 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	SDS23	P53172	527 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	RAV2	Q03956	351 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	UPS3	Q04006	179 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	CNL1	Q06333	122 aa		4.7	□□□□□ -1.66
SCS7	YMR272C	ADH2	P00331	348 aa	Known RBP	4.69	□□□□□ -1.66
SCS7	YMR272C	SEC72	P39742	193 aa	Known RBP	4.69	□□□□□ -1.66
SCS7	YMR272C	GLE2	P40066	365 aa		4.69	□□□□□ -1.66
SCS7	YMR272C	MSL1	P40567	111 aa	Predicted RBP	4.69	□□□□□ -1.66
SCS7	YMR272C	HAC1	P41546	238 aa		4.69	□□□□□ -1.66
SCS7	YMR272C	YGL230C	P53074	147 aa		4.69	□□□□□ -1.66
SCS7	YMR272C	THG1	P53215	237 aa	Known RBP	4.69	□□□□□ -1.66
SCS7	YMR272C	TOM7	P53507	60 aa		4.69	□□□□□ -1.66
SCS7	YMR272C	WIP1	Q2V2P8	89 aa		4.69	□□□□□ -1.66
SCS7	YMR272C	YGR240C-A	Q3E786	66 aa		4.69	□□□□□ -1.66
SCS7	YMR272C	Q0255	P03881	472 aa		4.68	□□□□□ -1.66
SCS7	YMR272C	HMRA1	P0CY11	126 aa		4.68	□□□□□ -1.66
SCS7	YMR272C	PRE1	P22141	198 aa	Known RBP	4.68	□□□□□ -1.66
SCS7	YMR272C	YPT10	P38146	199 aa		4.68	□□□□□ -1.66
SCS7	YMR272C	RPR2	P40571	144 aa		4.68	□□□□□ -1.66
SCS7	YMR272C	GIM5	Q04493	163 aa		4.68	□□□□□ -1.66
SCS7	YMR272C	ARC18	Q05933	178 aa	Known RBP	4.68	□□□□□ -1.66
SCS7	YMR272C	RPL11A	P0C0W9	174 aa	Known RBP	4.67	□□□□□ -1.66
SCS7	YMR272C	SEC11	P15367	167 aa		4.67	□□□□□ -1.66
SCS7	YMR272C	RPF1	P38805	295 aa	Known RBP	4.67	□□□□□ -1.66
SCS7	YMR272C	YNL200C	P40165	246 aa	Known RBP	4.67	□□□□□ -1.66
SCS7	YMR272C	YDL183C	P48569	320 aa		4.67	□□□□□ -1.66
SCS7	YMR272C	DIA1	P54005	336 aa		4.67	□□□□□ -1.66
SCS7	YMR272C	RPL11B	Q3E757	174 aa	Predicted RBP	4.67	□□□□□ -1.66
SCS7	YMR272C	YLR342W-A	Q3E810	57 aa		4.67	□□□□□ -1.66
SCS7	YMR272C	YPR170W-B	P0C5R9	85 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	RPL23A	P0CX41	137 aa	Known RBP	4.66	□□□□□ -1.66
SCS7	YMR272C	RPL23B	P0CX42	137 aa	Known RBP	4.66	□□□□□ -1.66
SCS7	YMR272C	YCR007C	P25354	239 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	FZF1	P32805	299 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	AIM29	P36154	155 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	VHS2	P40463	436 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	YGL118C	P53132	145 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	DAD4	P69851	72 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	ATP19	P81451	68 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	FSF1	Q12029	327 aa	Known RBP	4.66	□□□□□ -1.66
SCS7	YMR272C	CRC1	Q12289	327 aa		4.66	□□□□□ -1.66
SCS7	YMR272C	SAL1	D6W196	494 aa		4.65	□□□□□ -1.67
SCS7	YMR272C	VAR1	P02381	398 aa		4.65	□□□□□ -1.67
SCS7	YMR272C	RPL12A	P0CX53	165 aa	Known RBP	4.65	□□□□□ -1.67
SCS7	YMR272C	RPL12B	P0CX54	165 aa		4.65	□□□□□ -1.67
SCS7	YMR272C	YLR050C	Q12155	161 aa	Known RBP	4.65	□□□□□ -1.67
SCS7	YMR272C	TIR1	P10863	254 aa		4.64	□□□□□ -1.67
SCS7	YMR272C	POP3	P53833	195 aa	Predicted RBP	4.64	□□□□□ -1.67
SCS7	YMR272C	DPP1	Q05521	289 aa		4.64	□□□□□ -1.67
SCS7	YMR272C	MRPL31	P14063	131 aa	Predicted RBP	4.63	□□□□□ -1.67
SCS7	YMR272C	SOH1	P38633	127 aa		4.63	□□□□□ -1.67
SCS7	YMR272C	YPS5	P53057	165 aa		4.63	□□□□□ -1.67
SCS7	YMR272C	BRP1	P53194	125 aa		4.63	□□□□□ -1.67
SCS7	YMR272C	ERI1	P62651	68 aa	Known RBP	4.63	□□□□□ -1.67
SCS7	YMR272C	ATG33	Q06485	197 aa		4.63	□□□□□ -1.67
SCS7	YMR272C	YPR010C-A	A5Z2X5	72 aa		4.62	□□□□□ -1.67
SCS7	YMR272C	MBF1	O14467	151 aa	Known RBP	4.62	□□□□□ -1.67
SCS7	YMR272C	YKR070W	P36151	352 aa	Known RBP	4.62	□□□□□ -1.67
SCS7	YMR272C	FYV4	P38783	130 aa	Predicted RBP	4.62	□□□□□ -1.67
SCS7	YMR272C	YGR025W	P53216	100 aa		4.62	□□□□□ -1.67
SCS7	YMR272C	AIM34	Q03673	198 aa		4.62	□□□□□ -1.67
SCS7	YMR272C	TIM22	Q12328	207 aa		4.62	□□□□□ -1.67
SCS7	YMR272C	YLR363W-A	Q3E747	85 aa		4.62	□□□□□ -1.67
SCS7	YMR272C	MRP49	P32388	137 aa		4.61	□□□□□ -1.67
SCS7	YMR272C	PAU7	P39545	55 aa		4.61	□□□□□ -1.67
SCS7	YMR272C	SPI1	P40092	148 aa		4.61	□□□□□ -1.67
SCS7	YMR272C	YFR045W	P43617	309 aa		4.61	□□□□□ -1.67
SCS7	YMR272C	YGR017W	P53210	297 aa		4.61	□□□□□ -1.67
SCS7	YMR272C	GTO3	Q04806	366 aa		4.61	□□□□□ -1.67
SCS7	YMR272C	MDN1	Q12019	4910 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 57 ms