RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C AUA1P32450 94 aa0.16□□□□□ -2.38
CMS1YLR003C YGL204CP53089 101 aa0.16□□□□□ -2.38
CMS1YLR003C ERV14P53173 138 aa0.16□□□□□ -2.38
CMS1YLR003C MYO1P08964 1928 aa0.16□□□□□ -2.38
CMS1YLR003C GIM4P40005 111 aaKnown RBP0.15□□□□□ -2.39
CMS1YLR003C YDR010CQ12426 110 aa0.15□□□□□ -2.39
CMS1YLR003C FAS2P19097 1887 aaKnown RBP0.15□□□□□ -2.39
CMS1YLR003C MYO2P19524 1574 aaKnown RBP0.15□□□□□ -2.39
CMS1YLR003C RPL22AP05749 121 aaKnown RBP0.14□□□□□ -2.39
CMS1YLR003C SEC59P20048 519 aa0.14□□□□□ -2.39
CMS1YLR003C YFR035CP43608 114 aa0.14□□□□□ -2.39
CMS1YLR003C LCL1Q02786 101 aa0.14□□□□□ -2.39
CMS1YLR003C HPA2Q06592 156 aa0.14□□□□□ -2.39
CMS1YLR003C YGL041C-BQ3E750 60 aa0.14□□□□□ -2.39
CMS1YLR003C ENV10Q99382 181 aa0.14□□□□□ -2.39
CMS1YLR003C HYM1P32464 399 aa0.13□□□□□ -2.39
CMS1YLR003C YIL014C-AQ02598 104 aa0.13□□□□□ -2.39
CMS1YLR003C YLR361C-AQ3E795 98 aa0.13□□□□□ -2.39
CMS1YLR003C YKL044WP36092 106 aa0.12□□□□□ -2.39
CMS1YLR003C SLO1Q3E784 85 aa0.12□□□□□ -2.39
CMS1YLR003C SEC7P11075 2009 aaKnown RBP0.12□□□□□ -2.39
CMS1YLR003C TY4B-HP0C2J7 1802 aa0.12□□□□□ -2.39
CMS1YLR003C BRR2P32639 2163 aaKnown RBP0.12□□□□□ -2.39
CMS1YLR003C YGR042WP53227 271 aa0.11□□□□□ -2.39
CMS1YLR003C CNL1Q06333 122 aa0.11□□□□□ -2.39
CMS1YLR003C TIM8P57744 87 aa0.1□□□□□ -2.39
CMS1YLR003C ARL3Q02804 198 aa0.1□□□□□ -2.39
CMS1YLR003C GPI19Q04082 140 aa0.1□□□□□ -2.39
CMS1YLR003C YOR376W-AQ3E805 51 aa0.09□□□□□ -2.4
CMS1YLR003C YEA6P39953 335 aa0.08□□□□□ -2.4
CMS1YLR003C ECM5Q03214 1411 aa0.07□□□□□ -2.4
CMS1YLR003C MRPS12P53732 153 aa0.07□□□□□ -2.4
CMS1YLR003C OST5Q92316 86 aa0.07□□□□□ -2.4
CMS1YLR003C SAE3P89114 91 aa0.06□□□□□ -2.4
CMS1YLR003C DNA2P38859 1522 aa0.06□□□□□ -2.4
CMS1YLR003C SNF11P38956 169 aa0.05□□□□□ -2.4
CMS1YLR003C YIR020CP40575 100 aa0.05□□□□□ -2.4
CMS1YLR003C YPL261CQ08976 102 aa0.05□□□□□ -2.4
CMS1YLR003C YBR072C-AQ3E794 53 aa0.05□□□□□ -2.4
CMS1YLR003C TAO3P40468 2376 aa0.05□□□□□ -2.4
CMS1YLR003C COX23P38824 151 aa0.04□□□□□ -2.4
CMS1YLR003C DYN2Q02647 92 aa0.04□□□□□ -2.4
CMS1YLR003C YLR285C-AQ3E771 56 aa0.04□□□□□ -2.4
CMS1YLR003C YER187WP40102 141 aa0.03□□□□□ -2.4
CMS1YLR003C CYB5P40312 120 aa0.03□□□□□ -2.4
CMS1YLR003C VPS55P47111 140 aa0.03□□□□□ -2.4
CMS1YLR003C PAU12P53343 120 aa0.03□□□□□ -2.4
CMS1YLR003C POP7P38291 140 aa0.02□□□□□ -2.41
CMS1YLR003C RPL22BP56628 122 aaKnown RBP0.02□□□□□ -2.41
CMS1YLR003C SPC2Q04969 178 aa0.02□□□□□ -2.41
CMS1YLR003C NKP2Q06162 153 aa0.02□□□□□ -2.41
CMS1YLR003C YLR118CQ12354 227 aa0.02□□□□□ -2.41
CMS1YLR003C YLR363W-AQ3E747 85 aa0.02□□□□□ -2.41
CMS1YLR003C PCC1Q3E833 88 aa0.02□□□□□ -2.41
CMS1YLR003C ACP1P32463 125 aa0.01□□□□□ -2.41
CMS1YLR003C YHR173CP38864 112 aa0.01□□□□□ -2.41
CMS1YLR003C AIM11P87275 137 aa0.01□□□□□ -2.41
CMS1YLR003C MRP49P32388 137 aa0□□□□□ -2.41
CMS1YLR003C YHR130CP38834 111 aa0□□□□□ -2.41
CMS1YLR003C YOL164W-AQ3E7A5 60 aa0□□□□□ -2.41
CMS1YLR003C YCR099CP25657 155 aa-0.01□□□□□ -2.41
CMS1YLR003C SPC24Q04477 213 aa-0.01□□□□□ -2.41
CMS1YLR003C FRQ1Q06389 190 aa-0.01□□□□□ -2.41
CMS1YLR003C YOR097CQ12274 175 aaPredicted RBP-0.01□□□□□ -2.41
CMS1YLR003C YCL048W-AQ2V2Q2 79 aa-0.01□□□□□ -2.41
CMS1YLR003C POL2P21951 2222 aaKnown RBP-0.01□□□□□ -2.41
CMS1YLR003C YLR255CO13574 117 aa-0.02□□□□□ -2.41
CMS1YLR003C TDA2P40045 126 aa-0.02□□□□□ -2.41
CMS1YLR003C RIM15P43565 1770 aa-0.02□□□□□ -2.41
CMS1YLR003C RAD50P12753 1312 aa-0.03□□□□□ -2.41
CMS1YLR003C GCV3P39726 170 aaPredicted RBP-0.03□□□□□ -2.41
CMS1YLR003C YIL086CP40503 102 aa-0.03□□□□□ -2.41
CMS1YLR003C SNN1P48232 102 aa-0.03□□□□□ -2.41
CMS1YLR003C GTT1P40582 234 aa-0.04□□□□□ -2.42
CMS1YLR003C DAD1Q12248 94 aa-0.04□□□□□ -2.42
CMS1YLR003C YLR099W-AQ3E798 87 aa-0.04□□□□□ -2.42
CMS1YLR003C ADK1P07170 222 aaKnown RBP-0.05□□□□□ -2.42
CMS1YLR003C RPB11P38902 120 aa-0.05□□□□□ -2.42
CMS1YLR003C VMA7P39111 118 aa-0.05□□□□□ -2.42
CMS1YLR003C COX19Q3E731 98 aa-0.05□□□□□ -2.42
CMS1YLR003C CCW14O13547 238 aa-0.06□□□□□ -2.42
CMS1YLR003C PAU2P32612 120 aa-0.06□□□□□ -2.42
CMS1YLR003C PAU24P38155 120 aa-0.06□□□□□ -2.42
CMS1YLR003C YDR210WQ03482 75 aa-0.06□□□□□ -2.42
CMS1YLR003C YLR419WQ06698 1435 aaKnown RBP-0.06□□□□□ -2.42
CMS1YLR003C HMRA2P0CY13 119 aa-0.07□□□□□ -2.42
CMS1YLR003C SHU1P38751 150 aa-0.07□□□□□ -2.42
CMS1YLR003C YLR365WQ7LIF2 110 aa-0.07□□□□□ -2.42
CMS1YLR003C BPT1P14772 1559 aa-0.07□□□□□ -2.42
CMS1YLR003C YNL190WP53872 204 aa-0.08□□□□□ -2.42
CMS1YLR003C TOP2P06786 1428 aaKnown RBP-0.09□□□□□ -2.42
CMS1YLR003C YAR029WP39549 74 aa-0.09□□□□□ -2.42
CMS1YLR003C IMP2P46972 177 aa-0.09□□□□□ -2.42
CMS1YLR003C YRF1-2P40105 1681 aa-0.1□□□□□ -2.43
CMS1YLR003C RPA12P32529 125 aaKnown RBP-0.1□□□□□ -2.43
CMS1YLR003C LSM6Q06406 86 aaKnown RBP-0.1□□□□□ -2.43
CMS1YLR003C TY1B-BLQ12490 1755 aa-0.11□□□□□ -2.43
CMS1YLR003C PAU19P0CE85 124 aa-0.11□□□□□ -2.43
CMS1YLR003C PAU3P25610 124 aa-0.11□□□□□ -2.43
CMS1YLR003C PAM16P42949 149 aa-0.11□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 129.6 ms