RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W RPL28P02406 149 aaKnown RBP3.39□□□□□ -1.87
PRE9YGR135W YKL044WP36092 106 aa3.39□□□□□ -1.87
PRE9YGR135W SFT2P38166 215 aa3.39□□□□□ -1.87
PRE9YGR135W DOG2P38773 246 aa3.39□□□□□ -1.87
PRE9YGR135W YFR045WP43617 309 aa3.39□□□□□ -1.87
PRE9YGR135W YNL184CP53876 108 aa3.39□□□□□ -1.87
PRE9YGR135W CRZ1P53968 678 aa3.39□□□□□ -1.87
PRE9YGR135W ELC1Q03071 99 aa3.39□□□□□ -1.87
PRE9YGR135W MRX11Q03079 207 aa3.39□□□□□ -1.87
PRE9YGR135W SDC1Q03323 175 aa3.39□□□□□ -1.87
PRE9YGR135W MIX17Q03667 156 aa3.39□□□□□ -1.87
PRE9YGR135W RAF1Q06891 181 aa3.39□□□□□ -1.87
PRE9YGR135W YOS1Q3E834 85 aa3.39□□□□□ -1.87
PRE9YGR135W YCR023CP25351 611 aa3.38□□□□□ -1.87
PRE9YGR135W SNF11P38956 169 aa3.38□□□□□ -1.87
PRE9YGR135W PAU7P39545 55 aa3.38□□□□□ -1.87
PRE9YGR135W YIL014C-AQ02598 104 aa3.38□□□□□ -1.87
PRE9YGR135W YDR042CQ03205 200 aa3.38□□□□□ -1.87
PRE9YGR135W IRC25Q07951 179 aa3.38□□□□□ -1.87
PRE9YGR135W DFM1Q12743 341 aaKnown RBP3.38□□□□□ -1.87
PRE9YGR135W HTL1Q9URQ5 78 aa3.38□□□□□ -1.87
PRE9YGR135W CPT1P17898 393 aa3.37□□□□□ -1.87
PRE9YGR135W APS1P35181 156 aa3.37□□□□□ -1.87
PRE9YGR135W CSH1P38287 376 aa3.37□□□□□ -1.87
PRE9YGR135W YGR018CP53211 109 aa3.37□□□□□ -1.87
PRE9YGR135W SRL1Q08673 210 aa3.37□□□□□ -1.87
PRE9YGR135W YCR075W-AQ3E830 75 aa3.37□□□□□ -1.87
PRE9YGR135W RPS8AP0CX39 200 aaKnown RBP3.36□□□□□ -1.87
PRE9YGR135W RPS8BP0CX40 200 aaKnown RBP3.36□□□□□ -1.87
PRE9YGR135W YOX1P34161 385 aa3.36□□□□□ -1.87
PRE9YGR135W YGP1P38616 354 aaKnown RBP3.36□□□□□ -1.87
PRE9YGR135W MIX14Q04341 121 aa3.36□□□□□ -1.87
PRE9YGR135W PBA1Q05778 276 aa3.36□□□□□ -1.87
PRE9YGR135W RFM1Q12192 310 aa3.36□□□□□ -1.87
PRE9YGR135W YCL021W-AQ96VH3 125 aa3.36□□□□□ -1.87
PRE9YGR135W INO4P13902 151 aa3.35□□□□□ -1.87
PRE9YGR135W COX10P21592 462 aa3.35□□□□□ -1.87
PRE9YGR135W YKR032WP36127 104 aa3.35□□□□□ -1.87
PRE9YGR135W YKR041WP36134 250 aa3.35□□□□□ -1.87
PRE9YGR135W YMR141CP40211 102 aa3.35□□□□□ -1.87
PRE9YGR135W YPL073CP40323 161 aa3.35□□□□□ -1.87
PRE9YGR135W OST2P46964 130 aa3.35□□□□□ -1.87
PRE9YGR135W GON7P46984 123 aa3.35□□□□□ -1.87
PRE9YGR135W ALG13P53178 202 aa3.35□□□□□ -1.87
PRE9YGR135W YMR103CQ04436 120 aa3.35□□□□□ -1.87
PRE9YGR135W LIP2Q06005 328 aa3.35□□□□□ -1.87
PRE9YGR135W DGA1Q08650 418 aa3.35□□□□□ -1.87
PRE9YGR135W YOR376WQ08900 122 aa3.35□□□□□ -1.87
PRE9YGR135W YPL278CQ08990 100 aa3.35□□□□□ -1.87
PRE9YGR135W JID1Q12350 301 aa3.35□□□□□ -1.87
PRE9YGR135W FOL3Q12676 427 aaPredicted RBP3.35□□□□□ -1.87
PRE9YGR135W YOR304C-AO14468 76 aa3.34□□□□□ -1.87
PRE9YGR135W ATX1P38636 73 aa3.34□□□□□ -1.87
PRE9YGR135W YER084WP40057 128 aa3.34□□□□□ -1.87
PRE9YGR135W LST8P41318 303 aa3.34□□□□□ -1.87
PRE9YGR135W YFL065CP43539 102 aa3.34□□□□□ -1.87
PRE9YGR135W DAD4P69851 72 aa3.34□□□□□ -1.87
PRE9YGR135W YDR114CQ04597 100 aa3.34□□□□□ -1.87
PRE9YGR135W MSA1Q08471 629 aa3.34□□□□□ -1.87
PRE9YGR135W YPR203WQ08994 102 aa3.34□□□□□ -1.87
PRE9YGR135W ISD11Q6Q560 94 aa3.34□□□□□ -1.87
PRE9YGR135W VAR1P02381 398 aa3.33□□□□□ -1.88
PRE9YGR135W YBL071CP38185 102 aa3.33□□□□□ -1.88
PRE9YGR135W YEL067CP39978 195 aa3.33□□□□□ -1.88
PRE9YGR135W YER181CP40097 107 aa3.33□□□□□ -1.88
PRE9YGR135W ECO1P43605 281 aa3.33□□□□□ -1.88
PRE9YGR135W HST4P53688 370 aa3.33□□□□□ -1.88
PRE9YGR135W MGR2Q02889 113 aa3.33□□□□□ -1.88
PRE9YGR135W PPT2Q12036 173 aa3.33□□□□□ -1.88
PRE9YGR135W YER078W-AQ3E7A2 54 aa3.33□□□□□ -1.88
PRE9YGR135W RPL35AP0CX84 120 aaKnown RBP3.32□□□□□ -1.88
PRE9YGR135W RPL35BP0CX85 120 aaKnown RBP3.32□□□□□ -1.88
PRE9YGR135W NHP2P32495 156 aaPredicted RBP3.32□□□□□ -1.88
PRE9YGR135W MRPL39P36533 70 aa3.32□□□□□ -1.88
PRE9YGR135W OXA1P39952 402 aa3.32□□□□□ -1.88
PRE9YGR135W DAD1Q12248 94 aa3.32□□□□□ -1.88
PRE9YGR135W YOR032W-AQ8TGS1 66 aa3.32□□□□□ -1.88
PRE9YGR135W YHR213WP0CI67 198 aa3.31□□□□□ -1.88
PRE9YGR135W GPI18P38211 433 aa3.31□□□□□ -1.88
PRE9YGR135W YHR130CP38834 111 aa3.31□□□□□ -1.88
PRE9YGR135W YER076CP40049 302 aa3.31□□□□□ -1.88
PRE9YGR135W YNR077CP53758 84 aa3.31□□□□□ -1.88
PRE9YGR135W GPI19Q04082 140 aa3.31□□□□□ -1.88
PRE9YGR135W SDH7Q04401 133 aa3.31□□□□□ -1.88
PRE9YGR135W YDR115WQ04598 105 aa3.31□□□□□ -1.88
PRE9YGR135W FCF1Q05498 189 aaPredicted RBP3.31□□□□□ -1.88
PRE9YGR135W YOR097CQ12274 175 aaPredicted RBP3.31□□□□□ -1.88
PRE9YGR135W PFY1P07274 126 aa3.3□□□□□ -1.88
PRE9YGR135W YDL022C-AP0C5L6 82 aa3.3□□□□□ -1.88
PRE9YGR135W KRE1P17260 313 aa3.3□□□□□ -1.88
PRE9YGR135W RPA12P32529 125 aaKnown RBP3.3□□□□□ -1.88
PRE9YGR135W YKR045CP36138 183 aa3.3□□□□□ -1.88
PRE9YGR135W GLE2P40066 365 aa3.3□□□□□ -1.88
PRE9YGR135W IMP2P46972 177 aa3.3□□□□□ -1.88
PRE9YGR135W PIR5P46999 287 aa3.3□□□□□ -1.88
PRE9YGR135W YIP3P53633 176 aa3.3□□□□□ -1.88
PRE9YGR135W HPA2Q06592 156 aa3.3□□□□□ -1.88
PRE9YGR135W COA3Q3E7B2 85 aa3.3□□□□□ -1.88
PRE9YGR135W YLR342W-AQ3E810 57 aa3.3□□□□□ -1.88
PRE9YGR135W YPL229WQ99395 206 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 262.6 ms