RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W TY2B-BQ12491 1770 aa3.92□□□□□ -1.78
PDE1YGL248W GCN2P15442 1659 aa3.92□□□□□ -1.78
PDE1YGL248W MIG1P27705 504 aa3.92□□□□□ -1.78
PDE1YGL248W ASK1P35734 292 aa3.92□□□□□ -1.78
PDE1YGL248W YKR045CP36138 183 aa3.92□□□□□ -1.78
PDE1YGL248W YPL261CQ08976 102 aa3.92□□□□□ -1.78
PDE1YGL248W SRB8P25648 1427 aa3.92□□□□□ -1.78
PDE1YGL248W TY1B-NL2Q99337 1749 aaKnown RBP3.92□□□□□ -1.78
PDE1YGL248W MDM35O60200 86 aa3.91□□□□□ -1.78
PDE1YGL248W KRE1P17260 313 aa3.91□□□□□ -1.78
PDE1YGL248W DNF1P32660 1571 aa3.91□□□□□ -1.78
PDE1YGL248W SNN1P48232 102 aa3.91□□□□□ -1.78
PDE1YGL248W NMA1Q06178 401 aaKnown RBP3.91□□□□□ -1.78
PDE1YGL248W YDL241WQ07738 123 aa3.91□□□□□ -1.78
PDE1YGL248W ATG41Q12048 136 aa3.91□□□□□ -1.78
PDE1YGL248W ENV10Q99382 181 aa3.91□□□□□ -1.78
PDE1YGL248W MSB2P32334 1306 aa3.91□□□□□ -1.78
PDE1YGL248W AUS1Q08409 1394 aa3.9□□□□□ -1.78
PDE1YGL248W PAU21P0CE86 164 aa3.9□□□□□ -1.79
PDE1YGL248W PAU22P0CE87 164 aa3.9□□□□□ -1.79
PDE1YGL248W HSP26P15992 214 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
PDE1YGL248W YKR032WP36127 104 aa3.9□□□□□ -1.79
PDE1YGL248W SMD3P43321 101 aaKnown RBP3.9□□□□□ -1.79
PDE1YGL248W MHF1Q3E835 90 aa3.9□□□□□ -1.79
PDE1YGL248W YBR298C-AQ8TGK4 73 aa3.9□□□□□ -1.79
PDE1YGL248W YOL085CQ99345 113 aa3.9□□□□□ -1.79
PDE1YGL248W YBT1P32386 1661 aa3.9□□□□□ -1.79
PDE1YGL248W IRC20Q06554 1556 aa3.89□□□□□ -1.79
PDE1YGL248W MMS1Q06211 1407 aa3.89□□□□□ -1.79
PDE1YGL248W YEL067CP39978 195 aa3.89□□□□□ -1.79
PDE1YGL248W PPT2Q12036 173 aa3.89□□□□□ -1.79
PDE1YGL248W YPR013CQ12145 317 aa3.89□□□□□ -1.79
PDE1YGL248W RRT15Q3E811 62 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-DR5P0C2I2 1755 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-DR6P0C2I3 1755 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-LR2P0C2I5 1755 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-LR3P0C2I6 1755 aaKnown RBP3.89□□□□□ -1.79
PDE1YGL248W TY1B-PR1P0C2I9 1755 aaKnown RBP3.89□□□□□ -1.79
PDE1YGL248W TY1B-PR3P0C2J1 1755 aaKnown RBP3.89□□□□□ -1.79
PDE1YGL248W TY1B-JR1P47098 1755 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-ML2Q03434 1755 aaKnown RBP3.89□□□□□ -1.79
PDE1YGL248W TY1B-ER1Q03612 1755 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-ML1Q04711 1755 aaKnown RBP3.89□□□□□ -1.79
PDE1YGL248W TY1B-GR2Q12269 1755 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-OLQ12273 1755 aa3.89□□□□□ -1.79
PDE1YGL248W TY1B-PLQ12414 1755 aaKnown RBP3.89□□□□□ -1.79
PDE1YGL248W TOM6P33448 61 aa3.88□□□□□ -1.79
PDE1YGL248W MRPL27P36526 146 aaPredicted RBP3.88□□□□□ -1.79
PDE1YGL248W YHR180WP38868 163 aa3.88□□□□□ -1.79
PDE1YGL248W YGR269WP40326 108 aa3.88□□□□□ -1.79
PDE1YGL248W RPL22BP56628 122 aaKnown RBP3.88□□□□□ -1.79
PDE1YGL248W POC4Q12245 148 aaPredicted RBP3.88□□□□□ -1.79
PDE1YGL248W YMR175W-AQ3E766 64 aa3.88□□□□□ -1.79
PDE1YGL248W OST5Q92316 86 aa3.88□□□□□ -1.79
PDE1YGL248W IQG1Q12280 1495 aa3.87□□□□□ -1.79
PDE1YGL248W YHL005CP38752 130 aa3.87□□□□□ -1.79
PDE1YGL248W SEC7P11075 2009 aaKnown RBP3.87□□□□□ -1.79
PDE1YGL248W DCV1P43595 202 aa3.86□□□□□ -1.79
PDE1YGL248W BRP1P53194 125 aa3.86□□□□□ -1.79
PDE1YGL248W PAU12P53343 120 aa3.86□□□□□ -1.79
PDE1YGL248W POP3P53833 195 aaPredicted RBP3.86□□□□□ -1.79
PDE1YGL248W YPR153WQ06537 140 aa3.86□□□□□ -1.79
PDE1YGL248W YOR268CQ08734 132 aa3.86□□□□□ -1.79
PDE1YGL248W RPS25AQ3E792 108 aaPredicted RBP3.86□□□□□ -1.79
PDE1YGL248W YRF1-2P40105 1681 aa3.86□□□□□ -1.79
PDE1YGL248W TY1B-GR3Q12316 1755 aa3.86□□□□□ -1.79
PDE1YGL248W TY1B-ORQ92393 1755 aa3.86□□□□□ -1.79
PDE1YGL248W YHR213WP0CI67 198 aa3.85□□□□□ -1.79
PDE1YGL248W RPS23AP0CX29 145 aaKnown RBP3.85□□□□□ -1.79
PDE1YGL248W RPS23BP0CX30 145 aa3.85□□□□□ -1.79
PDE1YGL248W RSM18P40033 138 aa3.85□□□□□ -1.79
PDE1YGL248W RPL33BP41056 107 aaKnown RBP3.85□□□□□ -1.79
PDE1YGL248W YGL149WP53116 101 aa3.85□□□□□ -1.79
PDE1YGL248W YNR077CP53758 84 aa3.85□□□□□ -1.79
PDE1YGL248W CUE4Q04201 117 aaPredicted RBP3.85□□□□□ -1.79
PDE1YGL248W YOL131WQ08270 108 aa3.85□□□□□ -1.79
PDE1YGL248W CDC25P04821 1589 aa3.85□□□□□ -1.79
PDE1YGL248W YLR236CA0A023PZG4 107 aa3.84□□□□□ -1.79
PDE1YGL248W PAU2P32612 120 aa3.84□□□□□ -1.79
PDE1YGL248W YBR209WP38311 105 aa3.84□□□□□ -1.79
PDE1YGL248W ATX1P38636 73 aa3.84□□□□□ -1.79
PDE1YGL248W GCV3P39726 170 aaPredicted RBP3.84□□□□□ -1.79
PDE1YGL248W YDL157CQ12082 118 aa3.84□□□□□ -1.79
PDE1YGL248W ARO1P08566 1588 aaKnown RBP3.84□□□□□ -1.8
PDE1YGL248W FAS2P19097 1887 aaKnown RBP3.84□□□□□ -1.8
PDE1YGL248W SOD1P00445 154 aaKnown RBP3.83□□□□□ -1.8
PDE1YGL248W PAU19P0CE85 124 aa3.83□□□□□ -1.8
PDE1YGL248W RPL40AP0CH08 128 aaKnown RBP3.83□□□□□ -1.8
PDE1YGL248W RPL40BP0CH09 128 aaKnown RBP3.83□□□□□ -1.8
PDE1YGL248W PAU3P25610 124 aa3.83□□□□□ -1.8
PDE1YGL248W MET31Q03081 177 aa3.83□□□□□ -1.8
PDE1YGL248W AVO2Q04749 426 aa3.83□□□□□ -1.8
PDE1YGL248W GDB1Q06625 1536 aa3.83□□□□□ -1.8
PDE1YGL248W TY1B-JR2P47100 1755 aaKnown RBP3.83□□□□□ -1.8
PDE1YGL248W TY1B-ER2Q03619 1755 aa3.83□□□□□ -1.8
PDE1YGL248W TY1B-MR1Q04214 1755 aa3.83□□□□□ -1.8
PDE1YGL248W TY1B-MR2Q04670 1755 aaKnown RBP3.83□□□□□ -1.8
PDE1YGL248W TY1B-LR1Q12088 1755 aaKnown RBP3.83□□□□□ -1.8
PDE1YGL248W TY1B-NL1Q12112 1755 aa3.83□□□□□ -1.8
PDE1YGL248W TY1B-GR1Q12141 1755 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms