RNA–Protein interactions for RNA: YER035W

EDC2, Transcript of RNA-binding protein that directly activates mRNA decapping, yeast

Gene EDC2, Length 438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EDC2	YER035W	UBI4	P0CG63	381 aa	Known RBP	4.95	□□□□□ -1.62
EDC2	YER035W	UBC5	P15732	148 aa		4.95	□□□□□ -1.62
EDC2	YER035W	PGD1	P40356	397 aa		4.95	□□□□□ -1.62
EDC2	YER035W	YFR045W	P43617	309 aa		4.95	□□□□□ -1.62
EDC2	YER035W	UPS3	Q04006	179 aa		4.95	□□□□□ -1.62
EDC2	YER035W	HYP2	P23301	157 aa	Known RBP	4.94	□□□□□ -1.62
EDC2	YER035W	YBR090C	P38253	122 aa		4.94	□□□□□ -1.62
EDC2	YER035W	TIM21	P53220	239 aa		4.94	□□□□□ -1.62
EDC2	YER035W	YOR105W	Q08504	108 aa		4.94	□□□□□ -1.62
EDC2	YER035W	YCR007C	P25354	239 aa		4.93	□□□□□ -1.62
EDC2	YER035W	FZF1	P32805	299 aa		4.93	□□□□□ -1.62
EDC2	YER035W	SMP1	P38128	452 aa		4.93	□□□□□ -1.62
EDC2	YER035W	YBL081W	P38180	368 aa	Known RBP	4.93	□□□□□ -1.62
EDC2	YER035W	TAD2	P47058	250 aa		4.93	□□□□□ -1.62
EDC2	YER035W	YGR026W	P53217	278 aa		4.93	□□□□□ -1.62
EDC2	YER035W	YCL001W-A	P87012	153 aa		4.93	□□□□□ -1.62
EDC2	YER035W	TIR1	P10863	254 aa		4.92	□□□□□ -1.62
EDC2	YER035W	YBR209W	P38311	105 aa		4.92	□□□□□ -1.62
EDC2	YER035W	YIL024C	P40543	189 aa		4.92	□□□□□ -1.62
EDC2	YER035W	CIN5	P40917	295 aa		4.92	□□□□□ -1.62
EDC2	YER035W	YGL088W	P53151	121 aa		4.92	□□□□□ -1.62
EDC2	YER035W	YGL194C-A	Q2V2P6	80 aa		4.92	□□□□□ -1.62
EDC2	YER035W	RPL12A	P0CX53	165 aa	Known RBP	4.91	□□□□□ -1.62
EDC2	YER035W	RPL12B	P0CX54	165 aa		4.91	□□□□□ -1.62
EDC2	YER035W	ANT1	Q06497	328 aa		4.91	□□□□□ -1.62
EDC2	YER035W	SAR1	P20606	190 aa	Known RBP	4.9	□□□□□ -1.63
EDC2	YER035W	AIM19	P40502	157 aa		4.9	□□□□□ -1.63
EDC2	YER035W	SMD3	P43321	101 aa	Known RBP	4.9	□□□□□ -1.63
EDC2	YER035W	YGL185C	P53100	379 aa		4.9	□□□□□ -1.63
EDC2	YER035W	YBL112C	Q3E7Y4	105 aa		4.9	□□□□□ -1.63
EDC2	YER035W	RPL42A	P0CX27	106 aa	Known RBP	4.89	□□□□□ -1.63
EDC2	YER035W	RPL42B	P0CX28	106 aa	Known RBP	4.89	□□□□□ -1.63
EDC2	YER035W	ERG28	P40030	148 aa		4.89	□□□□□ -1.63
EDC2	YER035W	PAU4	P53427	120 aa		4.89	□□□□□ -1.63
EDC2	YER035W	CSM4	Q08955	156 aa		4.89	□□□□□ -1.63
EDC2	YER035W	SNU23	Q12368	194 aa	Predicted RBP	4.89	□□□□□ -1.63
EDC2	YER035W	MRPS9	P38120	278 aa		4.88	□□□□□ -1.63
EDC2	YER035W	YHR140W	P38842	239 aa		4.88	□□□□□ -1.63
EDC2	YER035W	PEX22	P39718	180 aa		4.88	□□□□□ -1.63
EDC2	YER035W	YER085C	P40058	173 aa		4.88	□□□□□ -1.63
EDC2	YER035W	TVP18	Q04767	167 aa		4.88	□□□□□ -1.63
EDC2	YER035W	MRPL31	P14063	131 aa	Predicted RBP	4.87	□□□□□ -1.63
EDC2	YER035W	GCV3	P39726	170 aa	Predicted RBP	4.87	□□□□□ -1.63
EDC2	YER035W	OST3	P48439	350 aa		4.87	□□□□□ -1.63
EDC2	YER035W	PAU1	P0CE88	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU14	P0CE89	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU6	P0CE90	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU18	P0CE91	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU8	P0CE92	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU11	P0CE93	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU13	P38725	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	RPB11	P38902	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	JAC1	P53193	184 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU10	Q03050	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	YLR194C	Q05777	254 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU20	Q08322	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	PAU9	Q3E770	120 aa		4.86	□□□□□ -1.63
EDC2	YER035W	CYB5	P40312	120 aa		4.85	□□□□□ -1.63
EDC2	YER035W	HAC1	P41546	238 aa		4.85	□□□□□ -1.63
EDC2	YER035W	ATP19	P81451	68 aa		4.85	□□□□□ -1.63
EDC2	YER035W	MHR1	Q06630	226 aa		4.85	□□□□□ -1.63
EDC2	YER035W	RPS22A	P0C0W1	130 aa	Known RBP	4.84	□□□□□ -1.63
EDC2	YER035W	MRP49	P32388	137 aa		4.84	□□□□□ -1.63
EDC2	YER035W	HIT1	P46973	164 aa		4.84	□□□□□ -1.63
EDC2	YER035W	YGL149W	P53116	101 aa		4.84	□□□□□ -1.63
EDC2	YER035W	GPI19	Q04082	140 aa		4.84	□□□□□ -1.63
EDC2	YER035W	NAT3	Q06504	195 aa		4.84	□□□□□ -1.63
EDC2	YER035W	YIL002W-A	Q3E7Z5	69 aa		4.84	□□□□□ -1.63
EDC2	YER035W	DCV1	P43595	202 aa		4.83	□□□□□ -1.64
EDC2	YER035W	THG1	P53215	237 aa	Known RBP	4.83	□□□□□ -1.64
EDC2	YER035W	YCL001W-B	Q96VH2	84 aa		4.83	□□□□□ -1.64
EDC2	YER035W	SEC72	P39742	193 aa	Known RBP	4.82	□□□□□ -1.64
EDC2	YER035W	YKL070W	P36087	169 aa		4.81	□□□□□ -1.64
EDC2	YER035W	AIM29	P36154	155 aa		4.81	□□□□□ -1.64
EDC2	YER035W	RIB5	P38145	238 aa		4.81	□□□□□ -1.64
EDC2	YER035W	YER076C	P40049	302 aa		4.81	□□□□□ -1.64
EDC2	YER035W	COX19	Q3E731	98 aa		4.81	□□□□□ -1.64
EDC2	YER035W	RPL27A	P0C2H6	136 aa	Known RBP	4.8	□□□□□ -1.64
EDC2	YER035W	MSK1	P32048	576 aa		4.8	□□□□□ -1.64
EDC2	YER035W	ZRT1	P32804	376 aa		4.8	□□□□□ -1.64
EDC2	YER035W	RPC10	P40422	70 aa		4.8	□□□□□ -1.64
EDC2	YER035W	GTO3	Q04806	366 aa		4.8	□□□□□ -1.64
EDC2	YER035W	ECM12	O13529	151 aa		4.79	□□□□□ -1.64
EDC2	YER035W	SMT3	Q12306	101 aa	Known RBP	4.79	□□□□□ -1.64
EDC2	YER035W	ENV10	Q99382	181 aa		4.79	□□□□□ -1.64
EDC2	YER035W	VMA7	P39111	118 aa		4.78	□□□□□ -1.64
EDC2	YER035W	MOG1	P47123	218 aa		4.78	□□□□□ -1.64
EDC2	YER035W	GIM5	Q04493	163 aa		4.78	□□□□□ -1.64
EDC2	YER035W	ADH2	P00331	348 aa	Known RBP	4.77	□□□□□ -1.65
EDC2	YER035W	SPC25	P40014	221 aa		4.77	□□□□□ -1.65
EDC2	YER035W	DAD3	P69850	94 aa		4.77	□□□□□ -1.65
EDC2	YER035W	YNL162W-A	Q3E7A8	72 aa		4.77	□□□□□ -1.65
EDC2	YER035W	CWP2	P43497	92 aa		4.76	□□□□□ -1.65
EDC2	YER035W	SDS23	P53172	527 aa		4.76	□□□□□ -1.65
EDC2	YER035W	YCL021W-A	Q96VH3	125 aa		4.76	□□□□□ -1.65
EDC2	YER035W	SHG1	P38337	142 aa		4.75	□□□□□ -1.65
EDC2	YER035W	VTC1	P40046	129 aa	RIP-Chip data	4.75	□□□□□ -1.65	not detected
EDC2	YER035W	SRP14	P38985	146 aa		4.74	□□□□□ -1.65
EDC2	YER035W	YGL041C-B	Q3E750	60 aa		4.74	□□□□□ -1.65
EDC2	YER035W	ARO2	P28777	376 aa	Known RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 163.5 ms