RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C YGR026WP53217 278 aa2.49□□□□□ -2.01
CDC40YDR364C CAX4P53223 239 aa2.49□□□□□ -2.01
CDC40YDR364C APS2Q00381 147 aa2.49□□□□□ -2.01
CDC40YDR364C FIT2Q08906 153 aa2.49□□□□□ -2.01
CDC40YDR364C SMT3Q12306 101 aaKnown RBP2.49□□□□□ -2.01
CDC40YDR364C YLR118CQ12354 227 aa2.49□□□□□ -2.01
CDC40YDR364C YAL067W-AQ8TGK6 75 aa2.49□□□□□ -2.01
CDC40YDR364C NHP6AP11632 93 aaKnown RBP2.48□□□□□ -2.01
CDC40YDR364C YGL010WP25338 174 aa2.48□□□□□ -2.01
CDC40YDR364C ECM33P38248 429 aaKnown RBP2.48□□□□□ -2.01
CDC40YDR364C SNU13P39990 126 aaKnown RBP2.48□□□□□ -2.01
CDC40YDR364C LSM4P40070 187 aaKnown RBP2.48□□□□□ -2.01
CDC40YDR364C IMP2P46972 177 aa2.48□□□□□ -2.01
CDC40YDR364C YJL027CP47063 138 aaPredicted RBP2.48□□□□□ -2.01
CDC40YDR364C YGL034CP53186 121 aa2.48□□□□□ -2.01
CDC40YDR364C RAV2Q03956 351 aa2.48□□□□□ -2.01
CDC40YDR364C DFM1Q12743 341 aaKnown RBP2.48□□□□□ -2.01
CDC40YDR364C IGO2Q9P305 131 aa2.48□□□□□ -2.01
CDC40YDR364C CCW14O13547 238 aa2.47□□□□□ -2.01
CDC40YDR364C MRS1P07266 363 aa2.47□□□□□ -2.01
CDC40YDR364C YHR213WP0CI67 198 aa2.47□□□□□ -2.01
CDC40YDR364C APS1P35181 156 aa2.47□□□□□ -2.01
CDC40YDR364C YHR173CP38864 112 aa2.47□□□□□ -2.01
CDC40YDR364C PEX17P40155 199 aa2.47□□□□□ -2.01
CDC40YDR364C POR2P40478 281 aa2.47□□□□□ -2.01
CDC40YDR364C PAU5P43575 122 aa2.47□□□□□ -2.01
CDC40YDR364C YPI1P43587 155 aa2.47□□□□□ -2.01
CDC40YDR364C YJL028WP47062 111 aa2.47□□□□□ -2.01
CDC40YDR364C TOM7P53507 60 aa2.47□□□□□ -2.01
CDC40YDR364C UBC7Q02159 165 aa2.47□□□□□ -2.01
CDC40YDR364C HOR7Q05827 59 aa2.47□□□□□ -2.01
CDC40YDR364C YOR105WQ08504 108 aa2.47□□□□□ -2.01
CDC40YDR364C BLM10P43583 2143 aa2.46□□□□□ -2.02
CDC40YDR364C PAU19P0CE85 124 aa2.46□□□□□ -2.02
CDC40YDR364C PAU21P0CE86 164 aa2.46□□□□□ -2.02
CDC40YDR364C PAU22P0CE87 164 aa2.46□□□□□ -2.02
CDC40YDR364C CPT1P17898 393 aa2.46□□□□□ -2.02
CDC40YDR364C PAU3P25610 124 aa2.46□□□□□ -2.02
CDC40YDR364C SRP21P32342 167 aa2.46□□□□□ -2.02
CDC40YDR364C YBR013CP38215 129 aa2.46□□□□□ -2.02
CDC40YDR364C IRC22P40006 225 aa2.46□□□□□ -2.02
CDC40YDR364C VPS55P47111 140 aa2.46□□□□□ -2.02
CDC40YDR364C YGR219WP53307 113 aa2.46□□□□□ -2.02
CDC40YDR364C CAB4P53332 305 aa2.46□□□□□ -2.02
CDC40YDR364C ATP19P81451 68 aa2.46□□□□□ -2.02
CDC40YDR364C ECM19Q06011 112 aa2.46□□□□□ -2.02
CDC40YDR364C DDI2P0CH63 225 aa2.45□□□□□ -2.02
CDC40YDR364C DDI3P0CH64 225 aa2.45□□□□□ -2.02
CDC40YDR364C CUP2P15315 225 aa2.45□□□□□ -2.02
CDC40YDR364C YBR090CP38253 122 aa2.45□□□□□ -2.02
CDC40YDR364C YMR141CP40211 102 aa2.45□□□□□ -2.02
CDC40YDR364C HUA1P40325 198 aa2.45□□□□□ -2.02
CDC40YDR364C YOL160WQ08321 113 aa2.45□□□□□ -2.02
CDC40YDR364C DAD1Q12248 94 aa2.45□□□□□ -2.02
CDC40YDR364C YNR034W-AQ3E841 98 aa2.45□□□□□ -2.02
CDC40YDR364C YCL001W-BQ96VH2 84 aa2.45□□□□□ -2.02
CDC40YDR364C YPL229WQ99395 206 aa2.45□□□□□ -2.02
CDC40YDR364C RPS28BP0C0X0 67 aaKnown RBP2.44□□□□□ -2.02
CDC40YDR364C TIR1P10863 254 aa2.44□□□□□ -2.02
CDC40YDR364C PAM17P36147 197 aa2.44□□□□□ -2.02
CDC40YDR364C SNF11P38956 169 aa2.44□□□□□ -2.02
CDC40YDR364C YER076CP40049 302 aa2.44□□□□□ -2.02
CDC40YDR364C GLE2P40066 365 aa2.44□□□□□ -2.02
CDC40YDR364C YFR045WP43617 309 aa2.44□□□□□ -2.02
CDC40YDR364C DAD4P69851 72 aa2.44□□□□□ -2.02
CDC40YDR364C ARL3Q02804 198 aa2.44□□□□□ -2.02
CDC40YDR364C YOR097CQ12274 175 aaPredicted RBP2.44□□□□□ -2.02
CDC40YDR364C RPS28AQ3E7X9 67 aaPredicted RBP2.44□□□□□ -2.02
CDC40YDR364C HTL1Q9URQ5 78 aa2.44□□□□□ -2.02
CDC40YDR364C BPH1P25356 2167 aa2.44□□□□□ -2.02
CDC40YDR364C HMRA1P0CY11 126 aa2.43□□□□□ -2.02
CDC40YDR364C SSS1P35179 80 aa2.43□□□□□ -2.02
CDC40YDR364C RPB11P38902 120 aa2.43□□□□□ -2.02
CDC40YDR364C TEM1P38987 245 aa2.43□□□□□ -2.02
CDC40YDR364C MRPL49P40858 161 aaPredicted RBP2.43□□□□□ -2.02
CDC40YDR364C FIP1P45976 327 aa2.43□□□□□ -2.02
CDC40YDR364C RPA43P46669 326 aa2.43□□□□□ -2.02
CDC40YDR364C PRM3Q08931 133 aa2.43□□□□□ -2.02
CDC40YDR364C TIM22Q12328 207 aa2.43□□□□□ -2.02
CDC40YDR364C LSO2Q3E772 92 aaKnown RBP2.43□□□□□ -2.02
CDC40YDR364C YBL112CQ3E7Y4 105 aa2.43□□□□□ -2.02
CDC40YDR364C YLR342W-AQ3E810 57 aa2.43□□□□□ -2.02
CDC40YDR364C YHR139C-AO13536 103 aa2.42□□□□□ -2.02
CDC40YDR364C POR1P04840 283 aaKnown RBP2.42□□□□□ -2.02
CDC40YDR364C MRPL31P14063 131 aaPredicted RBP2.42□□□□□ -2.02
CDC40YDR364C COX10P21592 462 aa2.42□□□□□ -2.02
CDC40YDR364C FZF1P32805 299 aa2.42□□□□□ -2.02
CDC40YDR364C MSA2P36157 363 aa2.42□□□□□ -2.02
CDC40YDR364C PAU7P39545 55 aa2.42□□□□□ -2.02
CDC40YDR364C YGR017WP53210 297 aa2.42□□□□□ -2.02
CDC40YDR364C CYT2Q00873 224 aa2.42□□□□□ -2.02
CDC40YDR364C ATG39Q06159 398 aa2.42□□□□□ -2.02
CDC40YDR364C YPL257WQ08974 193 aa2.42□□□□□ -2.02
CDC40YDR364C YPL162CQ12042 273 aa2.42□□□□□ -2.02
CDC40YDR364C ISD11Q6Q560 94 aa2.42□□□□□ -2.02
CDC40YDR364C YPR170W-BP0C5R9 85 aa2.41□□□□□ -2.02
CDC40YDR364C PRE5P40302 234 aaKnown RBP2.41□□□□□ -2.02
CDC40YDR364C TDA4P47153 279 aa2.41□□□□□ -2.02
CDC40YDR364C THG1P53215 237 aaKnown RBP2.41□□□□□ -2.02
CDC40YDR364C YGR025WP53216 100 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms