RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C RPS28AQ3E7X9 67 aaPredicted RBP1.85□□□□□ -2.11
RTN1YDR233C YIL046W-AQ3E7Z4 54 aa1.85□□□□□ -2.11
RTN1YDR233C MHF2Q3E829 80 aa1.85□□□□□ -2.11
RTN1YDR233C UBR1P19812 1950 aa1.85□□□□□ -2.11
RTN1YDR233C YSF3P0C074 85 aaPredicted RBP1.84□□□□□ -2.11
RTN1YDR233C RPS27AP35997 82 aaKnown RBP1.84□□□□□ -2.11
RTN1YDR233C RPS27BP38711 82 aa1.84□□□□□ -2.11
RTN1YDR233C YGR201CP42936 225 aa1.84□□□□□ -2.11
RTN1YDR233C SPT14P32363 452 aa1.83□□□□□ -2.12
RTN1YDR233C LHP1P33399 275 aaKnown RBP1.83□□□□□ -2.12
RTN1YDR233C GLC8P41818 229 aa1.83□□□□□ -2.12
RTN1YDR233C DCV1P43595 202 aa1.82□□□□□ -2.12
RTN1YDR233C YGL193CP53097 103 aa1.82□□□□□ -2.12
RTN1YDR233C MPC1P53157 130 aaKnown RBP1.82□□□□□ -2.12
RTN1YDR233C MHF1Q3E835 90 aa1.82□□□□□ -2.12
RTN1YDR233C KIN28P06242 306 aa1.81□□□□□ -2.12
RTN1YDR233C RPS20P38701 121 aaKnown RBP1.81□□□□□ -2.12
RTN1YDR233C YER181CP40097 107 aa1.81□□□□□ -2.12
RTN1YDR233C CIN5P40917 295 aa1.81□□□□□ -2.12
RTN1YDR233C NCE101Q02820 53 aa1.81□□□□□ -2.12
RTN1YDR233C CCW12Q12127 133 aa1.81□□□□□ -2.12
RTN1YDR233C YFR010W-AP0C5N0 62 aa1.8□□□□□ -2.12
RTN1YDR233C ARC19P33204 171 aaKnown RBP1.8□□□□□ -2.12
RTN1YDR233C FIG1P38224 298 aa1.8□□□□□ -2.12
RTN1YDR233C GEP7P53171 287 aa1.8□□□□□ -2.12
RTN1YDR233C MIX14Q04341 121 aa1.8□□□□□ -2.12
RTN1YDR233C IRC19Q07843 230 aa1.8□□□□□ -2.12
RTN1YDR233C YOR032W-AQ8TGS1 66 aa1.8□□□□□ -2.12
RTN1YDR233C RIB3Q99258 208 aa1.8□□□□□ -2.12
RTN1YDR233C FMP27Q06179 2628 aa1.8□□□□□ -2.12
RTN1YDR233C CDC39P25655 2108 aaKnown RBP1.79□□□□□ -2.12
RTN1YDR233C YHR214C-DP0CX93 97 aa1.79□□□□□ -2.12
RTN1YDR233C HSP150P32478 413 aa1.79□□□□□ -2.12
RTN1YDR233C TIM12P32830 109 aa1.79□□□□□ -2.12
RTN1YDR233C YJL218WP40892 196 aaKnown RBP1.79□□□□□ -2.12
RTN1YDR233C RBL2P48606 106 aaKnown RBP1.79□□□□□ -2.12
RTN1YDR233C SPC3Q12133 184 aa1.79□□□□□ -2.12
RTN1YDR233C MED11Q99278 115 aa1.79□□□□□ -2.12
RTN1YDR233C YGL041W-AP0C5N3 154 aa1.78□□□□□ -2.12
RTN1YDR233C CUP1-1P0CX80 61 aa1.78□□□□□ -2.12
RTN1YDR233C CUP1-2P0CX81 61 aa1.78□□□□□ -2.12
RTN1YDR233C PRE1P22141 198 aaKnown RBP1.78□□□□□ -2.12
RTN1YDR233C IPT1P38954 527 aa1.78□□□□□ -2.12
RTN1YDR233C YAR064WP39563 99 aa1.78□□□□□ -2.12
RTN1YDR233C YEL014CP39999 101 aa1.78□□□□□ -2.12
RTN1YDR233C PHB1P40961 287 aa1.78□□□□□ -2.12
RTN1YDR233C Q0144Q9ZZW2 109 aa1.78□□□□□ -2.12
RTN1YDR233C TOR1P35169 2470 aa1.77□□□□□ -2.13
RTN1YDR233C SEN1Q00416 2231 aaKnown RBP1.77□□□□□ -2.13
RTN1YDR233C SRP21P32342 167 aa1.77□□□□□ -2.13
RTN1YDR233C MRPL24P36525 258 aaPredicted RBP1.77□□□□□ -2.13
RTN1YDR233C YJR015WP47090 510 aa1.77□□□□□ -2.13
RTN1YDR233C RPL37BP51402 88 aaKnown RBP1.77□□□□□ -2.13
RTN1YDR233C KEI1Q06346 221 aa1.77□□□□□ -2.13
RTN1YDR233C FCY1Q12178 158 aa1.77□□□□□ -2.13
RTN1YDR233C YOR343CQ12484 108 aa1.77□□□□□ -2.13
RTN1YDR233C PET20Q99373 253 aa1.77□□□□□ -2.13
RTN1YDR233C HFA1P32874 2273 aa1.77□□□□□ -2.13
RTN1YDR233C PBI2P0CT04 75 aaKnown RBP1.76□□□□□ -2.13
RTN1YDR233C UGX2P32772 223 aa1.76□□□□□ -2.13
RTN1YDR233C YDC1Q02896 317 aa1.76□□□□□ -2.13
RTN1YDR233C NMA1Q06178 401 aaKnown RBP1.76□□□□□ -2.13
RTN1YDR233C RFU1Q08003 200 aa1.76□□□□□ -2.13
RTN1YDR233C YOR289WQ12012 251 aaPredicted RBP1.76□□□□□ -2.13
RTN1YDR233C YER188C-AP0C0V2 99 aa1.75□□□□□ -2.13
RTN1YDR233C PAU24P38155 120 aa1.75□□□□□ -2.13
RTN1YDR233C PAU12P53343 120 aa1.75□□□□□ -2.13
RTN1YDR233C YPD1Q07688 167 aa1.75□□□□□ -2.13
RTN1YDR233C ADK1P07170 222 aaKnown RBP1.74□□□□□ -2.13
RTN1YDR233C COX9P07255 59 aa1.74□□□□□ -2.13
RTN1YDR233C PAU2P32612 120 aa1.74□□□□□ -2.13
RTN1YDR233C RAF1Q06891 181 aa1.74□□□□□ -2.13
RTN1YDR233C YLR099W-AQ3E798 87 aa1.74□□□□□ -2.13
RTN1YDR233C SUS1Q6WNK7 96 aa1.74□□□□□ -2.13
RTN1YDR233C POL2P21951 2222 aaKnown RBP1.74□□□□□ -2.13
RTN1YDR233C YBR056W-AI2HB52 66 aa1.73□□□□□ -2.13
RTN1YDR233C RPL43AP0CX25 92 aaKnown RBP1.73□□□□□ -2.13
RTN1YDR233C RPL43BP0CX26 92 aa1.73□□□□□ -2.13
RTN1YDR233C DDR48P18899 430 aaKnown RBP1.73□□□□□ -2.13
RTN1YDR233C UTP11P34247 250 aaPredicted RBP1.73□□□□□ -2.13
RTN1YDR233C PRS3P38689 320 aaKnown RBP1.73□□□□□ -2.13
RTN1YDR233C SIP18P50263 79 aa1.73□□□□□ -2.13
RTN1YDR233C AIM36Q03798 255 aa1.73□□□□□ -2.13
RTN1YDR233C FIT3Q08907 204 aa1.73□□□□□ -2.13
RTN1YDR233C STT4P37297 1900 aa1.72□□□□□ -2.13
RTN1YDR233C YIL102CP40488 101 aa1.72□□□□□ -2.13
RTN1YDR233C PAM16P42949 149 aa1.72□□□□□ -2.13
RTN1YDR233C YGL204CP53089 101 aa1.72□□□□□ -2.13
RTN1YDR233C BRR2P32639 2163 aaKnown RBP1.71□□□□□ -2.14
RTN1YDR233C COX5BP00425 151 aa1.71□□□□□ -2.14
RTN1YDR233C YBR027CP38220 110 aa1.71□□□□□ -2.14
RTN1YDR233C IPI1P38803 334 aaPredicted RBP1.71□□□□□ -2.14
RTN1YDR233C YPL067CQ02754 198 aa1.71□□□□□ -2.14
RTN1YDR233C IRA2P19158 3079 aa1.71□□□□□ -2.14
RTN1YDR233C TEL1P38110 2787 aa1.7□□□□□ -2.14
RTN1YDR233C HYM1P32464 399 aa1.7□□□□□ -2.14
RTN1YDR233C GNA1P43577 159 aaPredicted RBP1.7□□□□□ -2.14
RTN1YDR233C SED1Q01589 338 aa1.7□□□□□ -2.14
RTN1YDR233C HUT1Q12520 339 aa1.7□□□□□ -2.14
RTN1YDR233C IRA1P18963 3092 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms