RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W RDS3Q06835 107 aaPredicted RBP1.47□□□□□ -2.17
SIR4YDR227W IRC19Q07843 230 aa1.47□□□□□ -2.17
SIR4YDR227W YOR020W-AQ3E824 90 aa1.47□□□□□ -2.17
SIR4YDR227W RPL13BP40212 199 aaKnown RBP1.47□□□□□ -2.17
SIR4YDR227W YMR103CQ04436 120 aa1.47□□□□□ -2.17
SIR4YDR227W ARO7P32178 256 aa1.47□□□□□ -2.17
SIR4YDR227W RPL14BP38754 138 aaKnown RBP1.47□□□□□ -2.17
SIR4YDR227W RRT13P40042 185 aa1.47□□□□□ -2.17
SIR4YDR227W YIR035CP40579 254 aa1.47□□□□□ -2.17
SIR4YDR227W AAH1P53909 347 aa1.47□□□□□ -2.17
SIR4YDR227W MAG1P22134 296 aaKnown RBP1.46□□□□□ -2.18
SIR4YDR227W RUB1Q03919 77 aa1.46□□□□□ -2.18
SIR4YDR227W MPD1Q12404 318 aaKnown RBP1.46□□□□□ -2.18
SIR4YDR227W TEL1P38110 2787 aa1.46□□□□□ -2.18
SIR4YDR227W UTP30P36144 274 aaKnown RBP1.46□□□□□ -2.18
SIR4YDR227W SGF11Q03067 99 aa1.46□□□□□ -2.18
SIR4YDR227W ATX2Q12067 313 aa1.46□□□□□ -2.18
SIR4YDR227W POR1P04840 283 aaKnown RBP1.46□□□□□ -2.18
SIR4YDR227W HOT13P36078 116 aa1.46□□□□□ -2.18
SIR4YDR227W SHH3Q04487 196 aa1.46□□□□□ -2.18
SIR4YDR227W RPS27AP35997 82 aaKnown RBP1.45□□□□□ -2.18
SIR4YDR227W MID2P36027 376 aa1.45□□□□□ -2.18
SIR4YDR227W RPS27BP38711 82 aa1.45□□□□□ -2.18
SIR4YDR227W SNU13P39990 126 aaKnown RBP1.45□□□□□ -2.18
SIR4YDR227W DLS1P40366 167 aa1.45□□□□□ -2.18
SIR4YDR227W ATG18P43601 500 aa1.45□□□□□ -2.18
SIR4YDR227W GRX5Q02784 150 aa1.45□□□□□ -2.18
SIR4YDR227W HOR7Q05827 59 aa1.45□□□□□ -2.18
SIR4YDR227W POC4Q12245 148 aaPredicted RBP1.45□□□□□ -2.18
SIR4YDR227W URA5P13298 226 aaKnown RBP1.45□□□□□ -2.18
SIR4YDR227W MIG3P39943 394 aa1.45□□□□□ -2.18
SIR4YDR227W SPC25P40014 221 aa1.45□□□□□ -2.18
SIR4YDR227W ARC15P40518 154 aaRIP-Chip data1.45□□□□□ -2.18not detected
SIR4YDR227W HYR1P40581 163 aaKnown RBP1.45□□□□□ -2.18
SIR4YDR227W HUR1P45820 110 aa1.45□□□□□ -2.18
SIR4YDR227W UBC12P52491 188 aa1.45□□□□□ -2.18
SIR4YDR227W UPS3Q04006 179 aa1.45□□□□□ -2.18
SIR4YDR227W YMR105W-AQ8TGS8 64 aa1.45□□□□□ -2.18
SIR4YDR227W YHR213WP0CI67 198 aa1.45□□□□□ -2.18
SIR4YDR227W HYP2P23301 157 aaKnown RBP1.45□□□□□ -2.18
SIR4YDR227W YND1P40009 630 aa1.45□□□□□ -2.18
SIR4YDR227W YER134CP40081 178 aa1.45□□□□□ -2.18
SIR4YDR227W NKP2Q06162 153 aa1.45□□□□□ -2.18
SIR4YDR227W YPR153WQ06537 140 aa1.45□□□□□ -2.18
SIR4YDR227W YPR013CQ12145 317 aa1.45□□□□□ -2.18
SIR4YDR227W YLR111WQ12528 110 aa1.45□□□□□ -2.18
SIR4YDR227W TOA2P32774 122 aa1.45□□□□□ -2.18
SIR4YDR227W GON7P46984 123 aa1.45□□□□□ -2.18
SIR4YDR227W BAT2P47176 376 aaKnown RBP1.45□□□□□ -2.18
SIR4YDR227W RPL22BP56628 122 aaKnown RBP1.45□□□□□ -2.18
SIR4YDR227W MRPS8Q03799 155 aa1.44□□□□□ -2.18
SIR4YDR227W YMR254CQ04838 102 aa1.44□□□□□ -2.18
SIR4YDR227W ZEO1Q08245 113 aa1.44□□□□□ -2.18
SIR4YDR227W AYT1Q12226 474 aa1.44□□□□□ -2.18
SIR4YDR227W COX12Q01519 83 aa1.44□□□□□ -2.18
SIR4YDR227W SED1Q01589 338 aa1.44□□□□□ -2.18
SIR4YDR227W SML1Q04964 104 aa1.44□□□□□ -2.18
SIR4YDR227W YDL157CQ12082 118 aa1.44□□□□□ -2.18
SIR4YDR227W ADK1P07170 222 aaKnown RBP1.44□□□□□ -2.18
SIR4YDR227W YFR045WP43617 309 aa1.44□□□□□ -2.18
SIR4YDR227W BRP1P53194 125 aa1.44□□□□□ -2.18
SIR4YDR227W NAT3Q06504 195 aa1.44□□□□□ -2.18
SIR4YDR227W YOR343CQ12484 108 aa1.44□□□□□ -2.18
SIR4YDR227W PRM4Q12498 284 aa1.44□□□□□ -2.18
SIR4YDR227W SDH3P33421 198 aa1.43□□□□□ -2.18
SIR4YDR227W MRPL11P36521 249 aaPredicted RBP1.43□□□□□ -2.18
SIR4YDR227W YFL019CP43576 117 aa1.43□□□□□ -2.18
SIR4YDR227W NAT5Q08689 176 aa1.43□□□□□ -2.18
SIR4YDR227W PEP8P40335 379 aa1.43□□□□□ -2.18
SIR4YDR227W YPI1P43587 155 aa1.43□□□□□ -2.18
SIR4YDR227W BLM10P43583 2143 aa1.43□□□□□ -2.18
SIR4YDR227W PBA1Q05778 276 aa1.43□□□□□ -2.18
SIR4YDR227W SLH1P53327 1967 aaKnown RBP1.42□□□□□ -2.18
SIR4YDR227W ANB1P19211 157 aa1.42□□□□□ -2.18
SIR4YDR227W SYM1Q06563 197 aa1.42□□□□□ -2.18
SIR4YDR227W FIT2Q08906 153 aa1.42□□□□□ -2.18
SIR4YDR227W CDC39P25655 2108 aaKnown RBP1.42□□□□□ -2.18
SIR4YDR227W YBL059WP34224 193 aa1.42□□□□□ -2.18
SIR4YDR227W YHR125WP38831 101 aa1.42□□□□□ -2.18
SIR4YDR227W YER187WP40102 141 aa1.42□□□□□ -2.18
SIR4YDR227W YMR252CQ04814 134 aa1.42□□□□□ -2.18
SIR4YDR227W FUN14P18411 198 aa1.42□□□□□ -2.18
SIR4YDR227W MRPL44P19956 98 aa1.42□□□□□ -2.18
SIR4YDR227W FMT1P32785 401 aa1.42□□□□□ -2.18
SIR4YDR227W RPB7P34087 171 aa1.42□□□□□ -2.18
SIR4YDR227W YHL018WP38744 120 aaPredicted RBP1.42□□□□□ -2.18
SIR4YDR227W CTR2P38865 189 aa1.42□□□□□ -2.18
SIR4YDR227W YHR180WP38868 163 aa1.42□□□□□ -2.18
SIR4YDR227W CCS1P40202 249 aaKnown RBP1.42□□□□□ -2.18
SIR4YDR227W FIT3Q08907 204 aa1.42□□□□□ -2.18
SIR4YDR227W YDR119W-AQ2V2P9 66 aa1.42□□□□□ -2.18
SIR4YDR227W YAL067W-AQ8TGK6 75 aa1.41□□□□□ -2.18
SIR4YDR227W PCL1P24867 279 aa1.41□□□□□ -2.18
SIR4YDR227W AGA2P32781 87 aa1.41□□□□□ -2.18
SIR4YDR227W YBR027CP38220 110 aa1.41□□□□□ -2.18
SIR4YDR227W PGA1P53896 198 aa1.41□□□□□ -2.18
SIR4YDR227W TIM22Q12328 207 aa1.41□□□□□ -2.18
SIR4YDR227W SRB6P32570 121 aa1.41□□□□□ -2.18
SIR4YDR227W NCE101Q02820 53 aa1.41□□□□□ -2.18
SIR4YDR227W YDR042CQ03205 200 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms