RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W UMP1P38293 148 aa4.21□□□□□ -1.73
FOB1YDR110W FLO5P38894 1075 aa4.21□□□□□ -1.73
FOB1YDR110W YEL073CP39974 107 aa4.21□□□□□ -1.73
FOB1YDR110W CAX4P53223 239 aa4.21□□□□□ -1.73
FOB1YDR110W MPC3P53311 146 aa4.21□□□□□ -1.73
FOB1YDR110W YMR254CQ04838 102 aa4.21□□□□□ -1.73
FOB1YDR110W YOL029CQ08187 201 aa4.21□□□□□ -1.73
FOB1YDR110W YHL018WP38744 120 aaPredicted RBP4.21□□□□□ -1.74
FOB1YDR110W API2Q04413 109 aa4.21□□□□□ -1.74
FOB1YDR110W YDR115WQ04598 105 aa4.21□□□□□ -1.74
FOB1YDR110W MHF1Q3E835 90 aa4.21□□□□□ -1.74
FOB1YDR110W MID2P36027 376 aa4.2□□□□□ -1.74
FOB1YDR110W HOT13P36078 116 aa4.2□□□□□ -1.74
FOB1YDR110W MPC1P53157 130 aaKnown RBP4.2□□□□□ -1.74
FOB1YDR110W MZM1Q03429 123 aaPredicted RBP4.2□□□□□ -1.74
FOB1YDR110W ECM19Q06011 112 aa4.2□□□□□ -1.74
FOB1YDR110W YDR524C-BQ3E6R4 66 aa4.2□□□□□ -1.74
FOB1YDR110W MOT1P32333 1867 aa4.2□□□□□ -1.74
FOB1YDR110W YPR117WQ06116 2489 aa4.19□□□□□ -1.74
FOB1YDR110W COX4P04037 155 aa4.19□□□□□ -1.74
FOB1YDR110W PEP8P40335 379 aa4.19□□□□□ -1.74
FOB1YDR110W YGL118CP53132 145 aa4.19□□□□□ -1.74
FOB1YDR110W YML122CQ03207 126 aa4.19□□□□□ -1.74
FOB1YDR110W TVP15Q03860 143 aa4.19□□□□□ -1.74
FOB1YDR110W ELP6Q04868 273 aa4.19□□□□□ -1.74
FOB1YDR110W YLR296WQ05898 108 aa4.19□□□□□ -1.74
FOB1YDR110W JID1Q12350 301 aa4.19□□□□□ -1.74
FOB1YDR110W FYV5P25585 152 aa4.18□□□□□ -1.74
FOB1YDR110W RPB9P27999 122 aa4.18□□□□□ -1.74
FOB1YDR110W QCR10P37299 77 aa4.18□□□□□ -1.74
FOB1YDR110W YNL217WP40152 326 aa4.18□□□□□ -1.74
FOB1YDR110W RSM19P53733 91 aaPredicted RBP4.18□□□□□ -1.74
FOB1YDR110W MIX14Q04341 121 aa4.18□□□□□ -1.74
FOB1YDR110W DFM1Q12743 341 aaKnown RBP4.18□□□□□ -1.74
FOB1YDR110W FKS1P38631 1876 aaKnown RBP4.18□□□□□ -1.74
FOB1YDR110W SVP26P38869 228 aa4.18□□□□□ -1.74
FOB1YDR110W DIM1P41819 318 aaKnown RBP4.18□□□□□ -1.74
FOB1YDR110W YDR042CQ03205 200 aa4.18□□□□□ -1.74
FOB1YDR110W YOL131WQ08270 108 aa4.18□□□□□ -1.74
FOB1YDR110W YOR381W-AQ3E804 55 aa4.18□□□□□ -1.74
FOB1YDR110W LAA1P39526 2014 aa4.17□□□□□ -1.74
FOB1YDR110W MDM35O60200 86 aa4.17□□□□□ -1.74
FOB1YDR110W RNQ1P25367 405 aa4.17□□□□□ -1.74
FOB1YDR110W NRG2P38082 220 aa4.17□□□□□ -1.74
FOB1YDR110W YHR125WP38831 101 aa4.17□□□□□ -1.74
FOB1YDR110W HYR1P40581 163 aaKnown RBP4.17□□□□□ -1.74
FOB1YDR110W SOM1Q05676 74 aa4.17□□□□□ -1.74
FOB1YDR110W NMA1Q06178 401 aaKnown RBP4.17□□□□□ -1.74
FOB1YDR110W RPS25BP0C0T4 108 aaKnown RBP4.16□□□□□ -1.74
FOB1YDR110W ASP1P38986 381 aaPredicted RBP4.16□□□□□ -1.74
FOB1YDR110W YMR175W-AQ3E766 64 aa4.16□□□□□ -1.74
FOB1YDR110W UBR2Q07963 1872 aa4.15□□□□□ -1.74
FOB1YDR110W YKR045CP36138 183 aa4.15□□□□□ -1.75
FOB1YDR110W YFL067WP43537 175 aa4.15□□□□□ -1.75
FOB1YDR110W HUR1P45820 110 aa4.15□□□□□ -1.75
FOB1YDR110W THG1P53215 237 aaKnown RBP4.15□□□□□ -1.75
FOB1YDR110W YHP1Q04116 353 aa4.15□□□□□ -1.75
FOB1YDR110W YDL241WQ07738 123 aa4.15□□□□□ -1.75
FOB1YDR110W ENV10Q99382 181 aa4.15□□□□□ -1.75
FOB1YDR110W RIF1P29539 1916 aa4.14□□□□□ -1.75
FOB1YDR110W RPA12P32529 125 aaKnown RBP4.14□□□□□ -1.75
FOB1YDR110W PTH1P38876 190 aaKnown RBP4.14□□□□□ -1.75
FOB1YDR110W SWM2P40342 146 aa4.14□□□□□ -1.75
FOB1YDR110W SMD3P43321 101 aaKnown RBP4.14□□□□□ -1.75
FOB1YDR110W YMR295CQ03559 197 aa4.14□□□□□ -1.75
FOB1YDR110W YER078W-AQ3E7A2 54 aa4.14□□□□□ -1.75
FOB1YDR110W ECO1P43605 281 aa4.13□□□□□ -1.75
FOB1YDR110W CRC1Q12289 327 aa4.13□□□□□ -1.75
FOB1YDR110W YER187WP40102 141 aa4.12□□□□□ -1.75
FOB1YDR110W IGO1P53897 168 aa4.12□□□□□ -1.75
FOB1YDR110W IRC25Q07951 179 aa4.12□□□□□ -1.75
FOB1YDR110W YDR034W-BQ6Q5X2 51 aa4.12□□□□□ -1.75
FOB1YDR110W YHR213WP0CI67 198 aa4.12□□□□□ -1.75
FOB1YDR110W KRE1P17260 313 aa4.12□□□□□ -1.75
FOB1YDR110W PAU12P53343 120 aa4.12□□□□□ -1.75
FOB1YDR110W CUE4Q04201 117 aaPredicted RBP4.12□□□□□ -1.75
FOB1YDR110W IRC19Q07843 230 aa4.12□□□□□ -1.75
FOB1YDR110W EMC6Q12431 108 aa4.12□□□□□ -1.75
FOB1YDR110W YDR119W-AQ2V2P9 66 aa4.12□□□□□ -1.75
FOB1YDR110W YIL134C-AQ45U18 67 aa4.12□□□□□ -1.75
FOB1YDR110W RPL40AP0CH08 128 aaKnown RBP4.11□□□□□ -1.75
FOB1YDR110W RPL40BP0CH09 128 aaKnown RBP4.11□□□□□ -1.75
FOB1YDR110W PAU2P32612 120 aa4.11□□□□□ -1.75
FOB1YDR110W FZF1P32805 299 aa4.11□□□□□ -1.75
FOB1YDR110W YHR138CP38841 114 aaPredicted RBP4.11□□□□□ -1.75
FOB1YDR110W DAD1Q12248 94 aa4.11□□□□□ -1.75
FOB1YDR110W YHR032W-AP0C5N6 59 aa4.1□□□□□ -1.75
FOB1YDR110W HSP26P15992 214 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
FOB1YDR110W SDH3P33421 198 aa4.1□□□□□ -1.75
FOB1YDR110W YLR363W-AQ3E747 85 aa4.1□□□□□ -1.75
FOB1YDR110W SUS1Q6WNK7 96 aa4.1□□□□□ -1.75
FOB1YDR110W YAL067W-AQ8TGK6 75 aa4.1□□□□□ -1.75
FOB1YDR110W YIL054WP40524 105 aa4.09□□□□□ -1.75
FOB1YDR110W YOR015WQ12169 119 aa4.09□□□□□ -1.75
FOB1YDR110W MSB2P32334 1306 aa4.09□□□□□ -1.75
FOB1YDR110W UTR5P32630 166 aa4.09□□□□□ -1.76
FOB1YDR110W SUN4P53616 420 aa4.09□□□□□ -1.76
FOB1YDR110W ATP19P81451 68 aa4.09□□□□□ -1.76
FOB1YDR110W GRX5Q02784 150 aa4.09□□□□□ -1.76
FOB1YDR110W IRC23Q08416 157 aa4.09□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms