RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	KTI12	P34253	313 aa	Known RBP	2.65	□□□□□ -1.99
PSF1	YDR013W	YKL044W	P36092	106 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	ECM33	P38248	429 aa	Known RBP	2.65	□□□□□ -1.99
PSF1	YDR013W	VHS2	P40463	436 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	YIR020C	P40575	100 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	YDL186W	P48568	277 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	DUO1	P53168	247 aa	Known RBP	2.65	□□□□□ -1.99
PSF1	YDR013W	YGR219W	P53307	113 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	VPS71	Q03433	280 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	BET5	Q03630	159 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	YMR103C	Q04436	120 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	HOR7	Q05827	59 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	SRL1	Q08673	210 aa		2.65	□□□□□ -1.99
PSF1	YDR013W	RPL42A	P0CX27	106 aa	Known RBP	2.64	□□□□□ -1.99
PSF1	YDR013W	RPL42B	P0CX28	106 aa	Known RBP	2.64	□□□□□ -1.99
PSF1	YDR013W	YKL102C	P34249	101 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	YBR209W	P38311	105 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	YER181C	P40097	107 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	GZF3	P42944	551 aa	Known RBP	2.64	□□□□□ -1.99
PSF1	YDR013W	GLO1	P50107	326 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	YIP3	P53633	176 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	SNA4	Q07549	140 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	RDL1	Q12305	139 aa	Known RBP	2.64	□□□□□ -1.99
PSF1	YDR013W	SLO1	Q3E784	85 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	YOR008C-A	Q3E7B9	74 aa		2.64	□□□□□ -1.99
PSF1	YDR013W	ADH2	P00331	348 aa	Known RBP	2.63	□□□□□ -1.99
PSF1	YDR013W	HYP2	P23301	157 aa	Known RBP	2.63	□□□□□ -1.99
PSF1	YDR013W	VMA11	P32842	164 aa		2.63	□□□□□ -1.99
PSF1	YDR013W	YKR045C	P36138	183 aa		2.63	□□□□□ -1.99
PSF1	YDR013W	MRPL49	P40858	161 aa	Predicted RBP	2.63	□□□□□ -1.99
PSF1	YDR013W	YIL014C-A	Q02598	104 aa		2.63	□□□□□ -1.99
PSF1	YDR013W	FCF1	Q05498	189 aa	Predicted RBP	2.63	□□□□□ -1.99
PSF1	YDR013W	ATG33	Q06485	197 aa		2.63	□□□□□ -1.99
PSF1	YDR013W	YOL160W	Q08321	113 aa		2.63	□□□□□ -1.99
PSF1	YDR013W	FMP27	Q06179	2628 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	ADH1	P00330	348 aa	Known RBP	2.62	□□□□□ -1.99
PSF1	YDR013W	PFY1	P07274	126 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	MIG1	P27705	504 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	ARO2	P28777	376 aa	Known RBP	2.62	□□□□□ -1.99
PSF1	YDR013W	NHP2	P32495	156 aa	Predicted RBP	2.62	□□□□□ -1.99
PSF1	YDR013W	YKR032W	P36127	104 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	MIC12	P38341	106 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	YIL059C	P40520	121 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	AGE2	P40529	298 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	YIL012W	P40551	113 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	DCV1	P43595	202 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	IMP2	P46972	177 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	YJL027C	P47063	138 aa	Predicted RBP	2.62	□□□□□ -1.99
PSF1	YDR013W	VPS55	P47111	140 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	BRP1	P53194	125 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	YNL092W	P53934	400 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	ABF2	Q02486	183 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	SPG4	Q04438	115 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	PRM7	Q12459	698 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	YCR075W-A	Q3E830	75 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	YCL021W-A	Q96VH3	125 aa		2.62	□□□□□ -1.99
PSF1	YDR013W	ACC1	Q00955	2233 aa	Known RBP	2.61	□□□□□ -1.99
PSF1	YDR013W	VAR1	P02381	398 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	AQY1	P0CD91	305 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	RPL18A	P0CX49	186 aa	Known RBP	2.61	□□□□□ -1.99
PSF1	YDR013W	RPL18B	P0CX50	186 aa	Known RBP	2.61	□□□□□ -1.99
PSF1	YDR013W	AGA1	P32323	725 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	ATX1	P38636	73 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	PET8	P38921	284 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	ALG13	P53178	202 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	CAX4	P53223	239 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	PMP3	P87284	55 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	YDR042C	Q03205	200 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	DGA1	Q08650	418 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	PRM3	Q08931	133 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	YIL102C-A	Q2V2P5	75 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	IGO2	Q9P305	131 aa		2.61	□□□□□ -1.99
PSF1	YDR013W	ATP15	P21306	62 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	YHR022C	P38763	256 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	OXA1	P39952	402 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	WWM1	P43582	211 aa	Known RBP	2.6	□□□□□ -1.99
PSF1	YDR013W	LCB3	P47013	409 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	TOS6	P48560	102 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	AIM11	P87275	137 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	AIM34	Q03673	198 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	YLR194C	Q05777	254 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
PSF1	YDR013W	YOL085C	Q99345	113 aa		2.6	□□□□□ -1.99
PSF1	YDR013W	RPL28	P02406	149 aa	Known RBP	2.59	□□□□□ -1.99
PSF1	YDR013W	YPR170W-B	P0C5R9	85 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	RPB9	P27999	122 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	YKL070W	P36087	169 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	YER135C	P40082	130 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	YNL217W	P40152	326 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	PEX17	P40155	199 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	YNL194C	P40169	301 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	SIM1	P40472	476 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	CIN5	P40917	295 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	YGL088W	P53151	121 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	MGR2	Q02889	113 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	YMR317W	Q04893	1140 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	YLR042C	Q07990	161 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	PPT2	Q12036	173 aa		2.59	□□□□□ -1.99
PSF1	YDR013W	DFM1	Q12743	341 aa	Known RBP	2.59	□□□□□ -1.99
PSF1	YDR013W	SEN1	Q00416	2231 aa	Known RBP	2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms