RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W TY1A-LR4P0C2I8 440 aaKnown RBP11.16□□□□□ -0.62
RPP1BYDL130W TY1A-DR6P0CX70 440 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-ER1P0CX71 440 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-LR2P0CX72 440 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-PLP0CX73 440 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-JR1P0CX74 440 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-LR3P0CX75 440 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-ML2P0CX76 440 aa11.16□□□□□ -0.62
RPP1BYDL130W YPT53P36019 220 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-GR1Q12085 440 aa11.16□□□□□ -0.62
RPP1BYDL130W TY1A-PR3Q6Q5H1 440 aaKnown RBP11.16□□□□□ -0.62
RPP1BYDL130W TY1A-OLQ92392 440 aaKnown RBP11.16□□□□□ -0.62
RPP1BYDL130W TEM1P38987 245 aa11.15□□□□□ -0.62
RPP1BYDL130W IRC22P40006 225 aa11.15□□□□□ -0.62
RPP1BYDL130W SPC1P46965 94 aa11.15□□□□□ -0.62
RPP1BYDL130W TVP18Q04767 167 aa11.15□□□□□ -0.62
RPP1BYDL130W POM33Q12164 279 aa11.15□□□□□ -0.62
RPP1BYDL130W SNU23Q12368 194 aaPredicted RBP11.13□□□□□ -0.63
RPP1BYDL130W DAN1P47178 298 aa11.12□□□□□ -0.63
RPP1BYDL130W SDS23P53172 527 aa11.11□□□□□ -0.63
RPP1BYDL130W KTI12P34253 313 aaKnown RBP11.1□□□□□ -0.63
RPP1BYDL130W CDC40P40968 455 aaPredicted RBP11.09□□□□□ -0.63
RPP1BYDL130W RPL42AP0CX27 106 aaKnown RBP11.08□□□□□ -0.64
RPP1BYDL130W RPL42BP0CX28 106 aaKnown RBP11.08□□□□□ -0.64
RPP1BYDL130W SDH8P38345 138 aa11.08□□□□□ -0.64
RPP1BYDL130W PMP3P87284 55 aa11.08□□□□□ -0.64
RPP1BYDL130W RPL23AP0CX41 137 aaKnown RBP11.06□□□□□ -0.64
RPP1BYDL130W RPL23BP0CX42 137 aaKnown RBP11.06□□□□□ -0.64
RPP1BYDL130W YGR149WP48236 432 aa11.06□□□□□ -0.64
RPP1BYDL130W DPP1Q05521 289 aa11.05□□□□□ -0.64
RPP1BYDL130W UBC5P15732 148 aa11.04□□□□□ -0.64
RPP1BYDL130W PBA1Q05778 276 aa11.04□□□□□ -0.64
RPP1BYDL130W ERI1P62651 68 aaKnown RBP11.03□□□□□ -0.64
RPP1BYDL130W ZEO1Q08245 113 aa11.03□□□□□ -0.64
RPP1BYDL130W WIP1Q2V2P8 89 aa11.03□□□□□ -0.64
RPP1BYDL130W YKR032WP36127 104 aa11.02□□□□□ -0.65
RPP1BYDL130W YJL028WP47062 111 aa11.02□□□□□ -0.65
RPP1BYDL130W YPR195CQ06594 109 aa11.02□□□□□ -0.65
RPP1BYDL130W FSF1Q12029 327 aaKnown RBP11.02□□□□□ -0.65
RPP1BYDL130W DCV1P43595 202 aa11.01□□□□□ -0.65
RPP1BYDL130W HHO1P53551 258 aa11.01□□□□□ -0.65
RPP1BYDL130W YLL066W-BQ8TGJ7 56 aa11.01□□□□□ -0.65
RPP1BYDL130W RPL11AP0C0W9 174 aaKnown RBP11□□□□□ -0.65
RPP1BYDL130W YBR013CP38215 129 aa11□□□□□ -0.65
RPP1BYDL130W NSE4P43124 402 aa11□□□□□ -0.65
RPP1BYDL130W RPL11BQ3E757 174 aaPredicted RBP11□□□□□ -0.65
RPP1BYDL130W RPS22BQ3E7Y3 130 aaKnown RBP10.99□□□□□ -0.65
RPP1BYDL130W RTC6O14464 93 aa10.98□□□□□ -0.65
RPP1BYDL130W PAU19P0CE85 124 aa10.98□□□□□ -0.65
RPP1BYDL130W PAU21P0CE86 164 aa10.98□□□□□ -0.65
RPP1BYDL130W PAU22P0CE87 164 aa10.98□□□□□ -0.65
RPP1BYDL130W PAU3P25610 124 aa10.98□□□□□ -0.65
RPP1BYDL130W YNL200CP40165 246 aaKnown RBP10.98□□□□□ -0.65
RPP1BYDL130W YMR122W-AQ3E842 84 aa10.98□□□□□ -0.65
RPP1BYDL130W RPL33AP05744 107 aaKnown RBP10.97□□□□□ -0.65
RPP1BYDL130W RPL33BP41056 107 aaKnown RBP10.97□□□□□ -0.65
RPP1BYDL130W YCR024C-BQ3E7Z8 88 aa10.97□□□□□ -0.65
RPP1BYDL130W SAL1D6W196 494 aa10.96□□□□□ -0.65
RPP1BYDL130W SEC4P07560 215 aaKnown RBP10.96□□□□□ -0.65
RPP1BYDL130W ARC15P40518 154 aaRIP-Chip data10.96□□□□□ -0.65not detected
RPP1BYDL130W GAT4P40569 121 aa10.96□□□□□ -0.65
RPP1BYDL130W PET8P38921 284 aa10.95□□□□□ -0.66
RPP1BYDL130W POR1P04840 283 aaKnown RBP10.94□□□□□ -0.66
RPP1BYDL130W MRP49P32388 137 aa10.93□□□□□ -0.66
RPP1BYDL130W SVP26P38869 228 aa10.93□□□□□ -0.66
RPP1BYDL130W ANB1P19211 157 aa10.92□□□□□ -0.66
RPP1BYDL130W GLO1P50107 326 aa10.92□□□□□ -0.66
RPP1BYDL130W YPR010C-AA5Z2X5 72 aa10.91□□□□□ -0.66
RPP1BYDL130W DIF1O13577 133 aa10.91□□□□□ -0.66
RPP1BYDL130W YKR070WP36151 352 aaKnown RBP10.91□□□□□ -0.66
RPP1BYDL130W GTT1P40582 234 aa10.91□□□□□ -0.66
RPP1BYDL130W YIL059CP40520 121 aa10.9□□□□□ -0.66
RPP1BYDL130W VTS1Q08831 523 aaKnown RBP RIP-Chip data10.9□□□□□ -0.66not detected
RPP1BYDL130W YBR209WP38311 105 aa10.89□□□□□ -0.67
RPP1BYDL130W YER076CP40049 302 aa10.89□□□□□ -0.67
RPP1BYDL130W PFY1P07274 126 aa10.88□□□□□ -0.67
RPP1BYDL130W RRT15Q3E811 62 aa10.88□□□□□ -0.67
RPP1BYDL130W YPR014CQ6B0W2 109 aa10.88□□□□□ -0.67
RPP1BYDL130W YMR320WQ04897 101 aa10.87□□□□□ -0.67
RPP1BYDL130W YGL088WP53151 121 aa10.86□□□□□ -0.67
RPP1BYDL130W YDR115WQ04598 105 aa10.86□□□□□ -0.67
RPP1BYDL130W SEC72P39742 193 aaKnown RBP10.85□□□□□ -0.67
RPP1BYDL130W MGR2Q02889 113 aa10.85□□□□□ -0.67
RPP1BYDL130W RPL16AP26784 199 aaKnown RBP10.84□□□□□ -0.67
RPP1BYDL130W CYT2Q00873 224 aa10.84□□□□□ -0.67
RPP1BYDL130W YIL014C-AQ02598 104 aa10.84□□□□□ -0.67
RPP1BYDL130W ERG28P40030 148 aa10.83□□□□□ -0.68
RPP1BYDL130W GIS2P53849 153 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
RPP1BYDL130W FCF1Q05498 189 aaPredicted RBP10.83□□□□□ -0.68
RPP1BYDL130W ADH2P00331 348 aaKnown RBP10.82□□□□□ -0.68
RPP1BYDL130W AIM29P36154 155 aa10.82□□□□□ -0.68
RPP1BYDL130W AQY1P0CD91 305 aa10.81□□□□□ -0.68
RPP1BYDL130W YJR146WP47174 117 aa10.81□□□□□ -0.68
RPP1BYDL130W ERG27Q12452 347 aaKnown RBP10.81□□□□□ -0.68
RPP1BYDL130W PRE1P22141 198 aaKnown RBP10.8□□□□□ -0.68
RPP1BYDL130W YOR008C-AQ3E7B9 74 aa10.8□□□□□ -0.68
RPP1BYDL130W TOS6P48560 102 aa10.79□□□□□ -0.68
RPP1BYDL130W YGL118CP53132 145 aa10.79□□□□□ -0.68
RPP1BYDL130W TRP1P00912 224 aa10.78□□□□□ -0.68
RPP1BYDL130W LCL2Q08045 131 aa10.78□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms